RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 ZNF846Q147U1 533 aa13.63□□□□□ -0.23
SSBP2-220ENST00000615665 NCF4Q15080 339 aa13.63□□□□□ -0.23
SSBP2-220ENST00000615665 SKIV2LQ15477 1246 aaKnown RBP13.63□□□□□ -0.23
SSBP2-220ENST00000615665 LIPJQ5W064 366 aa13.63□□□□□ -0.23
SSBP2-220ENST00000615665 CHST15Q7LFX5 561 aaPredicted RBP13.63□□□□□ -0.23
SSBP2-220ENST00000615665 PIH1D2Q8WWB5 315 aa13.63□□□□□ -0.23
SSBP2-220ENST00000615665 TUBB1Q9H4B7 451 aa13.63□□□□□ -0.23
SSBP2-220ENST00000615665 ZNF334Q9HCZ1 680 aaPredicted RBP13.63□□□□□ -0.23
SSBP2-220ENST00000615665 GPSM3Q9Y4H4 160 aa13.63□□□□□ -0.23
SSBP2-220ENST00000615665 EIF3FO00303 357 aaPredicted RBP13.63□□□□□ -0.23
SSBP2-220ENST00000615665 SLC28A2O43868 658 aa13.63□□□□□ -0.23
SSBP2-220ENST00000615665 ATP6V1G1O75348 118 aa13.63□□□□□ -0.23
SSBP2-220ENST00000615665 SERPINB7O75635 380 aa13.63□□□□□ -0.23
SSBP2-220ENST00000615665 DIRAS1O95057 198 aa13.63□□□□□ -0.23
SSBP2-220ENST00000615665 MED26O95402 600 aa13.63□□□□□ -0.23
SSBP2-220ENST00000615665 ELK4P28324 431 aa13.63□□□□□ -0.23
SSBP2-220ENST00000615665 FMO3P31513 532 aa13.63□□□□□ -0.23
SSBP2-220ENST00000615665 WASP42768 502 aa13.63□□□□□ -0.23
SSBP2-220ENST00000615665 APLP1P51693 650 aa13.63□□□□□ -0.23
SSBP2-220ENST00000615665 SMIM11AP58511 58 aa13.63□□□□□ -0.23
SSBP2-220ENST00000615665 TMEM115Q12893 351 aaPredicted RBP13.63□□□□□ -0.23
SSBP2-220ENST00000615665 MEP1AQ16819 746 aa13.63□□□□□ -0.23
SSBP2-220ENST00000615665 ZNF648Q5T619 568 aaPredicted RBP13.63□□□□□ -0.23
SSBP2-220ENST00000615665 ANKRD26P1Q6NSI1 321 aa13.63□□□□□ -0.23
SSBP2-220ENST00000615665 DEF8Q6ZN54 512 aa13.63□□□□□ -0.23
SSBP2-220ENST00000615665 S100ZQ8WXG8 99 aa13.63□□□□□ -0.23
SSBP2-220ENST00000615665 SLC22A12Q96S37 553 aa13.63□□□□□ -0.23
SSBP2-220ENST00000615665 CLCN7P51798 805 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 SFSWAPQ12872 951 aaKnown RBP13.62□□□□□ -0.23
SSBP2-220ENST00000615665 KCNAB2Q13303 367 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 SMU1Q2TAY7 513 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 ENPP6Q6UWR7 440 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 TRAM1L1Q8N609 369 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 CHST14Q8NCH0 376 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 ISOC1Q96CN7 298 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 SLC12A9Q9BXP2 914 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 C11orf49Q9H6J7 331 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 CD300AQ9UGN4 299 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 KLHL3Q9UH77 587 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 C7orf72A4D263 438 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 H7C0S8 307 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 ARNTLO00327 626 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 IFNW1P05000 195 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 DBTP11182 482 aaKnown RBP13.62□□□□□ -0.23
SSBP2-220ENST00000615665 JUPP14923 745 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 CTSOP43234 321 aaPredicted RBP13.62□□□□□ -0.23
SSBP2-220ENST00000615665 PSMD7P51665 324 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 UGT2B15P54855 530 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 MPP7Q5T2T1 576 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 BHLHB9Q6PI77 547 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 GET4Q7L5D6 327 aaPredicted RBP13.62□□□□□ -0.23
SSBP2-220ENST00000615665 GRASPQ7Z6J2 395 aaPredicted RBP13.62□□□□□ -0.23
SSBP2-220ENST00000615665 OOSP2Q86WS3 158 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 TFAP2CQ92754 450 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 SPATA5L1Q9BVQ7 753 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 BRINP2Q9C0B6 783 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 CAPN10Q9HC96 672 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 EXD2Q9NVH0 621 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 VAPAQ9P0L0 249 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 SLAMF8Q9P0V8 285 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 ZNF99A8MXY4 864 aaPredicted RBP13.62□□□□□ -0.23
SSBP2-220ENST00000615665 PRMT3O60678 531 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 HPRP00739 348 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 ACADMP11310 421 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 HMGA1P17096 107 aaKnown RBP13.62□□□□□ -0.23
SSBP2-220ENST00000615665 FPR1P21462 350 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 RPS13P62277 151 aaKnown RBP13.62□□□□□ -0.23
SSBP2-220ENST00000615665 ZNF805Q5CZA5 627 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 GPR153Q6NV75 609 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 ARMC6Q6NXE6 501 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 P2RY8Q86VZ1 359 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 NPAS3Q8IXF0 933 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 OR8H2Q8N162 312 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 CPXM2Q8N436 756 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 GLYATL1Q969I3 302 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 HSH2DQ96JZ2 352 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 PHPT1Q9NRX4 125 aaPredicted RBP13.62□□□□□ -0.23
SSBP2-220ENST00000615665 PSME2Q9UL46 239 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 OGDHLQ9ULD0 1010 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.62□□□□□ -0.237e-7■■□□□ 11.7
SSBP2-220ENST00000615665 MYL12BO14950 172 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 LSM1O15116 133 aaKnown RBP13.62□□□□□ -0.23
SSBP2-220ENST00000615665 PRLP01236 227 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 RHOP08100 348 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 KELP23276 732 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 GTDC1Q4AE62 458 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 METTL2BQ6P1Q9 378 aaKnown RBP13.62□□□□□ -0.23
SSBP2-220ENST00000615665 HTR3DQ70Z44 454 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 AMZ2Q86W34 360 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 OR2T11Q8NH01 316 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 EXOSC8Q96B26 276 aaKnown RBP13.62□□□□□ -0.23
SSBP2-220ENST00000615665 SLC35A5Q9BS91 424 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 RMI1Q9H9A7 625 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 RDH14Q9HBH5 336 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 SLC9A8Q9Y2E8 581 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 PCDHGB3Q9Y5G1 929 aa13.62□□□□□ -0.23
SSBP2-220ENST00000615665 A0A1W2PRB8 838 aa13.61□□□□□ -0.23
SSBP2-220ENST00000615665 ABCB7O75027 752 aa13.61□□□□□ -0.23
SSBP2-220ENST00000615665 RFX3P48380 749 aa13.61□□□□□ -0.23
SSBP2-220ENST00000615665 LAPTM4AQ15012 233 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms