RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 LPGAT1Q92604 370 aa12.75□□□□□ -0.37
POLR2J3-219ENST00000608621 CABS1Q96KC9 395 aa12.75□□□□□ -0.37
POLR2J3-219ENST00000608621 C10orf90Q96M02 699 aa12.75□□□□□ -0.37
POLR2J3-219ENST00000608621 TCF12Q99081 682 aa12.75□□□□□ -0.37
POLR2J3-219ENST00000608621 TSGA10Q9BZW7 698 aa12.75□□□□□ -0.37
POLR2J3-219ENST00000608621 MRPS30Q9NP92 439 aaKnown RBP12.75□□□□□ -0.37
POLR2J3-219ENST00000608621 SOX13Q9UN79 622 aa12.75□□□□□ -0.37
POLR2J3-219ENST00000608621 CDC14AQ9UNH5 594 aa12.75□□□□□ -0.37
POLR2J3-219ENST00000608621 CRYBG3Q68DQ2 2970 aa12.74□□□□□ -0.37
POLR2J3-219ENST00000608621 NSG1A0A0A6YYJ2 146 aa12.74□□□□□ -0.37
POLR2J3-219ENST00000608621 TCRBV7S3A2A0A539 114 aa12.74□□□□□ -0.37
POLR2J3-219ENST00000608621 ARHGEF33A8MVX0 844 aa12.74□□□□□ -0.37
POLR2J3-219ENST00000608621 H3BMM5 538 aa12.74□□□□□ -0.37
POLR2J3-219ENST00000608621 FFAR3O14843 346 aa12.74□□□□□ -0.37
POLR2J3-219ENST00000608621 PFDN6O15212 129 aa12.74□□□□□ -0.37
POLR2J3-219ENST00000608621 GPR42O15529 346 aa12.74□□□□□ -0.37
POLR2J3-219ENST00000608621 PSIP1O75475 530 aaKnown RBP12.74□□□□□ -0.37
POLR2J3-219ENST00000608621 ESR1P03372 595 aa12.74□□□□□ -0.37
POLR2J3-219ENST00000608621 PKMP14618 531 aaKnown RBP12.74□□□□□ -0.37
POLR2J3-219ENST00000608621 CXCR2P25025 360 aa12.74□□□□□ -0.37
POLR2J3-219ENST00000608621 ATP5DP30049 168 aa12.74□□□□□ -0.37
POLR2J3-219ENST00000608621 CDC25BP30305 580 aa12.74□□□□□ -0.37
POLR2J3-219ENST00000608621 RPA3P35244 121 aaPredicted RBP12.74□□□□□ -0.37
POLR2J3-219ENST00000608621 TERF1P54274 439 aa12.74□□□□□ -0.37
POLR2J3-219ENST00000608621 NAA25Q14CX7 972 aa12.74□□□□□ -0.37
POLR2J3-219ENST00000608621 TYSND1Q2T9J0 566 aa12.74□□□□□ -0.37
POLR2J3-219ENST00000608621 HKDC1Q2TB90 917 aa12.74□□□□□ -0.37
POLR2J3-219ENST00000608621 ACSBG2Q5FVE4 666 aa12.74□□□□□ -0.37
POLR2J3-219ENST00000608621 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.74□□□□□ -0.37
POLR2J3-219ENST00000608621 RPUSD3Q6P087 351 aaKnown RBP12.74□□□□□ -0.37
POLR2J3-219ENST00000608621 KBTBD2Q8IY47 623 aa12.74□□□□□ -0.37
POLR2J3-219ENST00000608621 SMPDL3AQ92484 453 aa12.74□□□□□ -0.37
POLR2J3-219ENST00000608621 PSMF1Q92530 271 aa12.74□□□□□ -0.37
POLR2J3-219ENST00000608621 PLCD4Q9BRC7 762 aa12.74□□□□□ -0.37
POLR2J3-219ENST00000608621 SYNPO2LQ9H987 977 aa12.74□□□□□ -0.37
POLR2J3-219ENST00000608621 PLA2G3Q9NZ20 509 aa12.74□□□□□ -0.37
POLR2J3-219ENST00000608621 PTGFRNQ9P2B2 879 aa12.74□□□□□ -0.37
POLR2J3-219ENST00000608621 TRPC4Q9UBN4 977 aa12.74□□□□□ -0.37
POLR2J3-219ENST00000608621 RUVBL1Q9Y265 456 aaKnown RBP12.74□□□□□ -0.37
POLR2J3-219ENST00000608621 HEATR5BQ9P2D3 2071 aa12.73□□□□□ -0.37
POLR2J3-219ENST00000608621 CROCCQ5TZA2 2017 aa12.73□□□□□ -0.37
POLR2J3-219ENST00000608621 IGKV1-8A0A0C4DH67 115 aa12.73□□□□□ -0.37
POLR2J3-219ENST00000608621 IDSB3KWA1 339 aa12.73□□□□□ -0.37
POLR2J3-219ENST00000608621 AVILO75366 819 aa12.73□□□□□ -0.37
POLR2J3-219ENST00000608621 VPS26AO75436 327 aa12.73□□□□□ -0.37
POLR2J3-219ENST00000608621 USP1O94782 785 aa12.73□□□□□ -0.37
POLR2J3-219ENST00000608621 FGGP02679 453 aa12.73□□□□□ -0.37
POLR2J3-219ENST00000608621 PRR35P0CG20 571 aa12.73□□□□□ -0.37
POLR2J3-219ENST00000608621 ERGP11308 486 aa12.73□□□□□ -0.37
POLR2J3-219ENST00000608621 COX6A1P12074 109 aa12.73□□□□□ -0.37
POLR2J3-219ENST00000608621 TPSB2P20231 275 aa12.73□□□□□ -0.37
POLR2J3-219ENST00000608621 EMP3P54852 163 aa12.73□□□□□ -0.37
POLR2J3-219ENST00000608621 ADARP55265 1226 aaKnown RBP12.73□□□□□ -0.37
POLR2J3-219ENST00000608621 ARG2P78540 354 aa12.73□□□□□ -0.37
POLR2J3-219ENST00000608621 CDK16Q00536 496 aa12.73□□□□□ -0.37
POLR2J3-219ENST00000608621 PRDX1Q06830 199 aaKnown RBP12.73□□□□□ -0.37
POLR2J3-219ENST00000608621 TPSAB1Q15661 275 aa12.73□□□□□ -0.37
POLR2J3-219ENST00000608621 RNF187Q5TA31 235 aaPredicted RBP12.73□□□□□ -0.37
POLR2J3-219ENST00000608621 FAAH2Q6GMR7 532 aa12.73□□□□□ -0.37
POLR2J3-219ENST00000608621 FAM180AQ6UWF9 173 aa12.73□□□□□ -0.37
POLR2J3-219ENST00000608621 CENPUQ71F23 418 aa12.73□□□□□ -0.37
POLR2J3-219ENST00000608621 PAQR7Q86WK9 346 aa12.73□□□□□ -0.37
POLR2J3-219ENST00000608621 SIRT6Q8N6T7 355 aa12.73□□□□□ -0.37
POLR2J3-219ENST00000608621 BRIX1Q8TDN6 353 aaKnown RBP12.73□□□□□ -0.37
POLR2J3-219ENST00000608621 MAIP1Q8WWC4 291 aa12.73□□□□□ -0.37
POLR2J3-219ENST00000608621 MMABQ96EY8 250 aaPredicted RBP12.73□□□□□ -0.37
POLR2J3-219ENST00000608621 PKP4Q99569 1192 aa12.73□□□□□ -0.37
POLR2J3-219ENST00000608621 TAC3Q9UHF0 121 aa12.73□□□□□ -0.37
POLR2J3-219ENST00000608621 ZKSCAN5Q9Y2L8 839 aa12.73□□□□□ -0.37
POLR2J3-219ENST00000608621 IGHV1-45A0A0A0MS14 117 aa12.72□□□□□ -0.37
POLR2J3-219ENST00000608621 DYTNA2CJ06 578 aa12.72□□□□□ -0.37
POLR2J3-219ENST00000608621 E5RI56 91 aa12.72□□□□□ -0.37
POLR2J3-219ENST00000608621 MYO1CO00159 1063 aa12.72□□□□□ -0.37
POLR2J3-219ENST00000608621 PRPF4O43172 522 aaKnown RBP eCLIP12.72□□□□□ -0.37
POLR2J3-219ENST00000608621 FOXS1O43638 330 aa12.72□□□□□ -0.37
POLR2J3-219ENST00000608621 PHF2O75151 1096 aa12.72□□□□□ -0.37
POLR2J3-219ENST00000608621 JRKO75564 520 aa12.72□□□□□ -0.37
POLR2J3-219ENST00000608621 WFS1O76024 890 aa12.72□□□□□ -0.37
POLR2J3-219ENST00000608621 CATP04040 527 aaKnown RBP12.72□□□□□ -0.37
POLR2J3-219ENST00000608621 HEXBP07686 556 aa12.72□□□□□ -0.37
POLR2J3-219ENST00000608621 OGNP20774 298 aaKnown RBP12.72□□□□□ -0.37
POLR2J3-219ENST00000608621 SLC26A3P40879 764 aa12.72□□□□□ -0.37
POLR2J3-219ENST00000608621 PNLIPRP1P54315 467 aa12.72□□□□□ -0.37
POLR2J3-219ENST00000608621 PER3P56645 1201 aa12.72□□□□□ -0.37
POLR2J3-219ENST00000608621 EEF1A2Q05639 463 aaKnown RBP12.72□□□□□ -0.37
POLR2J3-219ENST00000608621 DSG2Q14126 1118 aa12.72□□□□□ -0.37
POLR2J3-219ENST00000608621 KCNJ11Q14654 390 aa12.72□□□□□ -0.37
POLR2J3-219ENST00000608621 ARHGAP19Q14CB8 494 aa12.72□□□□□ -0.37
POLR2J3-219ENST00000608621 TRIP13Q15645 432 aaPredicted RBP12.72□□□□□ -0.37
POLR2J3-219ENST00000608621 ZRSR2Q15696 482 aaKnown RBP12.72□□□□□ -0.37
POLR2J3-219ENST00000608621 ICE2Q659A1 982 aa12.72□□□□□ -0.37
POLR2J3-219ENST00000608621 KIAA0930Q6ICG6 404 aaPredicted RBP12.72□□□□□ -0.37
POLR2J3-219ENST00000608621 NEPROQ6NW34 567 aa12.72□□□□□ -0.37
POLR2J3-219ENST00000608621 SPNS2Q8IVW8 549 aa12.72□□□□□ -0.37
POLR2J3-219ENST00000608621 REXO1L1PQ8IX06 675 aa12.72□□□□□ -0.37
POLR2J3-219ENST00000608621 CSNK1A1LQ8N752 337 aa12.72□□□□□ -0.37
POLR2J3-219ENST00000608621 AMER2Q8N7J2 671 aa12.72□□□□□ -0.37
POLR2J3-219ENST00000608621 BCORP1Q8N888 145 aa12.72□□□□□ -0.37
POLR2J3-219ENST00000608621 AMER3Q8N944 861 aa12.72□□□□□ -0.37
POLR2J3-219ENST00000608621 PPFIBP2Q8ND30 876 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms