RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 MTERF1Q99551 399 aaKnown RBP16.06■□□□□ 0.16
PRKCSH-217ENST00000592741 FAM120CQ9NX05 1096 aaKnown RBP16.06■□□□□ 0.16
PRKCSH-217ENST00000592741 SAMD4AQ9UPU9 718 aaKnown RBP16.06■□□□□ 0.16
PRKCSH-217ENST00000592741 HCFC2Q9Y5Z7 792 aa16.06■□□□□ 0.16
PRKCSH-217ENST00000592741 H0YIV9 168 aa16.05■□□□□ 0.16
PRKCSH-217ENST00000592741 EPN2O95208 641 aa16.05■□□□□ 0.16
PRKCSH-217ENST00000592741 ELK4P28324 431 aa16.05■□□□□ 0.16
PRKCSH-217ENST00000592741 YAP1P46937 504 aaKnown RBP16.05■□□□□ 0.16
PRKCSH-217ENST00000592741 DGKGP49619 791 aa16.05■□□□□ 0.16
PRKCSH-217ENST00000592741 ST8SIA6P61647 398 aa16.05■□□□□ 0.16
PRKCSH-217ENST00000592741 ACSM2AQ08AH3 577 aa16.05■□□□□ 0.16
PRKCSH-217ENST00000592741 PMS2P3Q13401 168 aa16.05■□□□□ 0.16
PRKCSH-217ENST00000592741 DHCR24Q15392 516 aa16.05■□□□□ 0.16
PRKCSH-217ENST00000592741 UGT8Q16880 541 aa16.05■□□□□ 0.16
PRKCSH-217ENST00000592741 ACSM2BQ68CK6 577 aa16.05■□□□□ 0.16
PRKCSH-217ENST00000592741 ZNF773Q6PK81 442 aa16.05■□□□□ 0.16
PRKCSH-217ENST00000592741 TMEM220Q6QAJ8 160 aa16.05■□□□□ 0.16
PRKCSH-217ENST00000592741 PARS2Q7L3T8 475 aaKnown RBP16.05■□□□□ 0.16
PRKCSH-217ENST00000592741 TERB1Q8NA31 727 aa16.05■□□□□ 0.16
PRKCSH-217ENST00000592741 CDC26Q8NHZ8 85 aa16.05■□□□□ 0.16
PRKCSH-217ENST00000592741 WFIKKN2Q8TEU8 576 aa16.05■□□□□ 0.16
PRKCSH-217ENST00000592741 MBOAT4Q96T53 435 aa16.05■□□□□ 0.16
PRKCSH-217ENST00000592741 CXorf21Q9HAI6 301 aa16.05■□□□□ 0.16
PRKCSH-217ENST00000592741 BRF2Q9HAW0 419 aa16.05■□□□□ 0.16
PRKCSH-217ENST00000592741 SGK2Q9HBY8 427 aa16.05■□□□□ 0.16
PRKCSH-217ENST00000592741 PRM3Q9NNZ6 103 aa16.05■□□□□ 0.16
PRKCSH-217ENST00000592741 FAM118AQ9NWS6 357 aa16.05■□□□□ 0.16
PRKCSH-217ENST00000592741 PSMD11O00231 422 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 NOBOXO60393 691 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 FGBP02675 491 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 HNRNPA1P09651 372 aaKnown RBP eCLIP16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 PBLDP30039 288 aaPredicted RBP16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 BMPR1AP36894 532 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 C21orf58P58505 322 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 RAB39AQ14964 217 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 RBM48Q5RL73 367 aaKnown RBP16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 HIPK1Q86Z02 1210 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 HS3ST5Q8IZT8 346 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 OR8J2Q8NGG1 315 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 ING5Q8WYH8 240 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 PKP4Q99569 1192 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 LIN28AQ9H9Z2 209 aaKnown RBP16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 EBF1Q9UH73 591 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 FBXO10Q9UK96 956 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 MAGEB17A8MXT2 336 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 CLIC1O00299 241 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 HS6ST1O60243 411 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 ADH5P11766 374 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 EPCAMP16422 314 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 CEBPBP17676 345 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 ENGP17813 658 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 EEF1B2P24534 225 aaKnown RBP16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 IMPA1P29218 277 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 DCTP40126 519 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 GJA8P48165 433 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 WNT3P56703 355 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 PCDH1Q08174 1060 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 SLC14A1Q13336 389 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 GRIN2CQ14957 1233 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 CCSMST1Q4G0I0 132 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 ERICH5Q6P6B1 374 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 GRASPQ7Z6J2 395 aaPredicted RBP16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 LILRA3Q8N6C8 439 aaPredicted RBP16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 ZNF366Q8N895 744 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 OR56A3Q8NH54 315 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 ZNF420Q8TAQ5 688 aaPredicted RBP16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 FOXJ1Q92949 421 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 TUBA1CQ9BQE3 449 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 C3orf18Q9UK00 162 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 ITM2BQ9Y287 266 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 ORC6Q9Y5N6 252 aa16.04■□□□□ 0.16
PRKCSH-217ENST00000592741 NOTCH4Q99466 2003 aa16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 KPNA3O00505 521 aaPredicted RBP16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 ZNF682O95780 498 aa16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 CYP17A1P05093 508 aa16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 CISD3P0C7P0 127 aa16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 ASMTP46597 345 aa16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 NUP107P57740 925 aa16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 BIRC2Q13490 618 aa16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 LRRC23Q53EV4 343 aaPredicted RBP16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 BROXQ5VW32 411 aa16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 ZCCHC8Q6NZY4 707 aaKnown RBP16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 ZNF621Q6ZSS3 439 aa16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 ZNF551Q7Z340 670 aaPredicted RBP16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 ZDHHC21Q8IVQ6 265 aa16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 SPPL3Q8TCT6 385 aa16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 C12orf43Q96C57 262 aaKnown RBP16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 OR4K3Q96R72 315 aa16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 WRAP53Q9BUR4 548 aaKnown RBP16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 AASDHPPTQ9NRN7 309 aa16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 CIDEBQ9UHD4 219 aa16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 MAPRE3Q9UPY8 281 aa16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 A0A1B0GVG6 124 aa16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 ZNF197O14709 1029 aa16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 CPSF4O95639 269 aaKnown RBP16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 SLC16A8O95907 504 aa16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 MAGEA2P43356 314 aa16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 SPIDRQ14159 915 aa16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 CBX2Q14781 532 aaPredicted RBP16.03■□□□□ 0.16
PRKCSH-217ENST00000592741 NEDD8Q15843 81 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms