RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 MMABQ96EY8 250 aaPredicted RBP13.48□□□□□ -0.25
ERCC1-205ENST00000587888 C10orf90Q96M02 699 aa13.48□□□□□ -0.25
ERCC1-205ENST00000587888 IL22Q9GZX6 179 aa13.48□□□□□ -0.25
ERCC1-205ENST00000587888 SPATA7Q9P0W8 599 aa13.48□□□□□ -0.25
ERCC1-205ENST00000587888 CDC14AQ9UNH5 594 aa13.48□□□□□ -0.25
ERCC1-205ENST00000587888 PRRC2CQ9Y520 2896 aaKnown RBP13.48□□□□□ -0.25
ERCC1-205ENST00000587888 IDSB3KWA1 339 aa13.47□□□□□ -0.25
ERCC1-205ENST00000587888 WFS1O76024 890 aa13.47□□□□□ -0.25
ERCC1-205ENST00000587888 USP1O94782 785 aa13.47□□□□□ -0.25
ERCC1-205ENST00000587888 HEXBP07686 556 aa13.47□□□□□ -0.25
ERCC1-205ENST00000587888 CELA2AP08217 269 aa13.47□□□□□ -0.25
ERCC1-205ENST00000587888 COX6A1P12074 109 aa13.47□□□□□ -0.25
ERCC1-205ENST00000587888 KCNK10P57789 538 aa13.47□□□□□ -0.25
ERCC1-205ENST00000587888 SRSF11Q05519 484 aaKnown RBP13.47□□□□□ -0.25
ERCC1-205ENST00000587888 RPS6KA1Q15418 735 aa13.47□□□□□ -0.25
ERCC1-205ENST00000587888 CCNG2Q16589 344 aa13.47□□□□□ -0.25
ERCC1-205ENST00000587888 HKDC1Q2TB90 917 aa13.47□□□□□ -0.25
ERCC1-205ENST00000587888 PRTGQ2VWP7 1150 aa13.47□□□□□ -0.25
ERCC1-205ENST00000587888 KLHL38Q2WGJ6 581 aa13.47□□□□□ -0.25
ERCC1-205ENST00000587888 ACSBG2Q5FVE4 666 aa13.47□□□□□ -0.25
ERCC1-205ENST00000587888 MRNIPQ6NTE8 343 aa13.47□□□□□ -0.25
ERCC1-205ENST00000587888 RPUSD3Q6P087 351 aaKnown RBP13.47□□□□□ -0.25
ERCC1-205ENST00000587888 LRRC8BQ6P9F7 803 aa13.47□□□□□ -0.25
ERCC1-205ENST00000587888 SLC34A3Q8N130 599 aa13.47□□□□□ -0.25
ERCC1-205ENST00000587888 CSNK1A1LQ8N752 337 aa13.47□□□□□ -0.25
ERCC1-205ENST00000587888 AMER2Q8N7J2 671 aa13.47□□□□□ -0.25
ERCC1-205ENST00000587888 SMPDL3AQ92484 453 aa13.47□□□□□ -0.25
ERCC1-205ENST00000587888 PSMF1Q92530 271 aa13.47□□□□□ -0.25
ERCC1-205ENST00000587888 PLCD4Q9BRC7 762 aa13.47□□□□□ -0.25
ERCC1-205ENST00000587888 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.47□□□□□ -0.25
ERCC1-205ENST00000587888 EIF2B3Q9NR50 452 aaKnown RBP13.47□□□□□ -0.25
ERCC1-205ENST00000587888 SYBUQ9NX95 663 aa13.47□□□□□ -0.25
ERCC1-205ENST00000587888 RUVBL1Q9Y265 456 aaKnown RBP13.47□□□□□ -0.25
ERCC1-205ENST00000587888 DRG1Q9Y295 367 aaKnown RBP13.47□□□□□ -0.25
ERCC1-205ENST00000587888 IGLV3-12A0A075B6K2 115 aa13.46□□□□□ -0.25
ERCC1-205ENST00000587888 A0A0A6YYC8 382 aaPredicted RBP13.46□□□□□ -0.25
ERCC1-205ENST00000587888 A0A1B0GUH1 482 aa13.46□□□□□ -0.25
ERCC1-205ENST00000587888 ARHGEF33A8MVX0 844 aa13.46□□□□□ -0.25
ERCC1-205ENST00000587888 I3L1I5 382 aaPredicted RBP13.46□□□□□ -0.25
ERCC1-205ENST00000587888 AP3B1O00203 1094 aa13.46□□□□□ -0.25
ERCC1-205ENST00000587888 PFDN6O15212 129 aa13.46□□□□□ -0.25
ERCC1-205ENST00000587888 VPS26AO75436 327 aa13.46□□□□□ -0.25
ERCC1-205ENST00000587888 ANXA5P08758 320 aa13.46□□□□□ -0.25
ERCC1-205ENST00000587888 ARNTP27540 789 aa13.46□□□□□ -0.25
ERCC1-205ENST00000587888 KCNJ1P48048 391 aa13.46□□□□□ -0.25
ERCC1-205ENST00000587888 NAA25Q14CX7 972 aa13.46□□□□□ -0.25
ERCC1-205ENST00000587888 SIX1Q15475 284 aaPredicted RBP13.46□□□□□ -0.25
ERCC1-205ENST00000587888 SYT16Q17RD7 645 aa13.46□□□□□ -0.25
ERCC1-205ENST00000587888 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.46□□□□□ -0.25
ERCC1-205ENST00000587888 C4orf22Q6V702 233 aa13.46□□□□□ -0.25
ERCC1-205ENST00000587888 TICAM1Q8IUC6 712 aa13.46□□□□□ -0.25
ERCC1-205ENST00000587888 PPFIBP2Q8ND30 876 aa13.46□□□□□ -0.25
ERCC1-205ENST00000587888 LPGAT1Q92604 370 aa13.46□□□□□ -0.25
ERCC1-205ENST00000587888 HAS2Q92819 552 aa13.46□□□□□ -0.25
ERCC1-205ENST00000587888 MARVELD3Q96A59 401 aa13.46□□□□□ -0.25
ERCC1-205ENST00000587888 TAAR6Q96RI8 345 aa13.46□□□□□ -0.25
ERCC1-205ENST00000587888 PKP4Q99569 1192 aa13.46□□□□□ -0.25
ERCC1-205ENST00000587888 SLX1AQ9BQ83 275 aa13.46□□□□□ -0.25
ERCC1-205ENST00000587888 KIFC1Q9BW19 673 aa13.46□□□□□ -0.25
ERCC1-205ENST00000587888 SYNPO2LQ9H987 977 aa13.46□□□□□ -0.25
ERCC1-205ENST00000587888 IGHV1-45A0A0A0MS14 117 aa13.45□□□□□ -0.26
ERCC1-205ENST00000587888 TRAV17A0A0B4J275 112 aa13.45□□□□□ -0.26
ERCC1-205ENST00000587888 IGKV1-8A0A0C4DH67 115 aa13.45□□□□□ -0.26
ERCC1-205ENST00000587888 TCRBV7S3A2A0A539 114 aa13.45□□□□□ -0.26
ERCC1-205ENST00000587888 E5RI56 91 aa13.45□□□□□ -0.26
ERCC1-205ENST00000587888 PRSS44E7EML9 344 aa13.45□□□□□ -0.26
ERCC1-205ENST00000587888 H3BMM5 538 aa13.45□□□□□ -0.26
ERCC1-205ENST00000587888 PRPF4O43172 522 aaKnown RBP eCLIP13.45□□□□□ -0.26
ERCC1-205ENST00000587888 AVILO75366 819 aa13.45□□□□□ -0.26
ERCC1-205ENST00000587888 BMP10O95393 424 aa13.45□□□□□ -0.26
ERCC1-205ENST00000587888 SYF2O95926 243 aaKnown RBP13.45□□□□□ -0.26
ERCC1-205ENST00000587888 ESR1P03372 595 aa13.45□□□□□ -0.26
ERCC1-205ENST00000587888 SERPINA7P05543 415 aa13.45□□□□□ -0.26
ERCC1-205ENST00000587888 STSP08842 583 aa13.45□□□□□ -0.26
ERCC1-205ENST00000587888 TNFSF10P50591 281 aa13.45□□□□□ -0.26
ERCC1-205ENST00000587888 PNLIPRP1P54315 467 aa13.45□□□□□ -0.26
ERCC1-205ENST00000587888 PRDX1Q06830 199 aaKnown RBP13.45□□□□□ -0.26
ERCC1-205ENST00000587888 DSG2Q14126 1118 aa13.45□□□□□ -0.26
ERCC1-205ENST00000587888 TRIP13Q15645 432 aaPredicted RBP13.45□□□□□ -0.26
ERCC1-205ENST00000587888 MEI1Q5TIA1 1274 aa13.45□□□□□ -0.26
ERCC1-205ENST00000587888 ZNF324BQ6AW86 544 aaPredicted RBP13.45□□□□□ -0.26
ERCC1-205ENST00000587888 ADCK2Q7Z695 626 aa13.45□□□□□ -0.26
ERCC1-205ENST00000587888 PAQR7Q86WK9 346 aa13.45□□□□□ -0.26
ERCC1-205ENST00000587888 SPNS2Q8IVW8 549 aa13.45□□□□□ -0.26
ERCC1-205ENST00000587888 AMER3Q8N944 861 aa13.45□□□□□ -0.26
ERCC1-205ENST00000587888 RERGQ96A58 199 aaPredicted RBP13.45□□□□□ -0.26
ERCC1-205ENST00000587888 TCF12Q99081 682 aa13.45□□□□□ -0.26
ERCC1-205ENST00000587888 STMN3Q9NZ72 180 aa13.45□□□□□ -0.26
ERCC1-205ENST00000587888 COPG2Q9UBF2 871 aa13.45□□□□□ -0.26
ERCC1-205ENST00000587888 TAC3Q9UHF0 121 aa13.45□□□□□ -0.26
ERCC1-205ENST00000587888 PCYOX1Q9UHG3 505 aa13.45□□□□□ -0.26
ERCC1-205ENST00000587888 MKL2Q9ULH7 1088 aa13.45□□□□□ -0.26
ERCC1-205ENST00000587888 MRPS2Q9Y399 296 aaKnown RBP13.45□□□□□ -0.26
ERCC1-205ENST00000587888 MYO1CO00159 1063 aa13.44□□□□□ -0.26
ERCC1-205ENST00000587888 HNRNPRO43390 633 aaKnown RBP13.44□□□□□ -0.26
ERCC1-205ENST00000587888 FOXS1O43638 330 aa13.44□□□□□ -0.26
ERCC1-205ENST00000587888 PSIP1O75475 530 aaKnown RBP13.44□□□□□ -0.26
ERCC1-205ENST00000587888 WDPCPO95876 746 aa13.44□□□□□ -0.26
ERCC1-205ENST00000587888 STATHP02808 62 aa13.44□□□□□ -0.26
ERCC1-205ENST00000587888 CATP04040 527 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms