RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 MDC1Q14676 2089 aaKnown RBP12.58□□□□□ -0.4
ERBB2-220ENST00000584684 LOC105369274A0A096LPK9 316 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 LOC102723532A0A0G2JNH3 316 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 FAM187AA6NFU0 413 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 K7EM74 188 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 WISP1O95388 367 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 PDGFAP04085 211 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 UMODP07911 640 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 FDXRP22570 491 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 HRH2P25021 359 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 RPL21P46778 160 aaKnown RBP12.57□□□□□ -0.4
ERBB2-220ENST00000584684 CARSP49589 748 aaKnown RBP12.57□□□□□ -0.4
ERBB2-220ENST00000584684 ETF1P62495 437 aaKnown RBP12.57□□□□□ -0.4
ERBB2-220ENST00000584684 YBX1P67809 324 aaKnown RBP12.57□□□□□ -0.4
ERBB2-220ENST00000584684 TLE1Q04724 770 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 CHAF1BQ13112 559 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 MUM1Q2TAK8 710 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 MLIPQ5VWP3 458 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 FAM45BPQ6NSW5 357 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 PAQR3Q6TCH7 311 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 OR4N4Q8N0Y3 316 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 MYO1HQ8N1T3 1032 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 SPATA4Q8NEY3 305 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 FAM45AQ8TCE6 357 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 MCOLN3Q8TDD5 553 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 EEF1AKMT1Q8WVE0 214 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 MVB12AQ96EY5 273 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 C10orf90Q96M02 699 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 CCDC138Q96M89 665 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 PWWP2AQ96N64 755 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 OR2A5Q96R48 311 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 SPSB2Q99619 263 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 SLC25A23Q9BV35 468 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 PHACTR1Q9C0D0 580 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 PCBD2Q9H0N5 130 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 PARVBQ9HBI1 364 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 PPANQ9NQ55 473 aaKnown RBP12.57□□□□□ -0.4
ERBB2-220ENST00000584684 CCDC177Q9NQR7 707 aaPredicted RBP12.57□□□□□ -0.4
ERBB2-220ENST00000584684 MOCS1Q9NZB8 636 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 WHRNQ9P202 907 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 STOX2Q9P2F5 926 aaPredicted RBP12.57□□□□□ -0.4
ERBB2-220ENST00000584684 SLC17A6Q9P2U8 582 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 G3BP2Q9UN86 482 aaKnown RBP12.57□□□□□ -0.4
ERBB2-220ENST00000584684 PDE10AQ9Y233 779 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 CCDC88CQ9P219 2028 aa12.57□□□□□ -0.4
ERBB2-220ENST00000584684 A0A0J9YVX5 310 aa12.56□□□□□ -0.4
ERBB2-220ENST00000584684 HYKKA2RU49 373 aa12.56□□□□□ -0.4
ERBB2-220ENST00000584684 SYF2O95926 243 aaKnown RBP12.56□□□□□ -0.4
ERBB2-220ENST00000584684 NR1D1P20393 614 aa12.56□□□□□ -0.4
ERBB2-220ENST00000584684 ALAS2P22557 587 aa12.56□□□□□ -0.4
ERBB2-220ENST00000584684 MMP11P24347 488 aa12.56□□□□□ -0.4
ERBB2-220ENST00000584684 CCND1P24385 295 aa12.56□□□□□ -0.4
ERBB2-220ENST00000584684 OTX2P32243 289 aa12.56□□□□□ -0.4
ERBB2-220ENST00000584684 AP1S2P56377 157 aa12.56□□□□□ -0.4
ERBB2-220ENST00000584684 TBPL1P62380 186 aa12.56□□□□□ -0.4
ERBB2-220ENST00000584684 MGAT5Q09328 741 aa12.56□□□□□ -0.4
ERBB2-220ENST00000584684 PDIA2Q13087 525 aaKnown RBP12.56□□□□□ -0.4
ERBB2-220ENST00000584684 SLC9A5Q14940 896 aa12.56□□□□□ -0.4
ERBB2-220ENST00000584684 FASTKD3Q14CZ7 662 aaKnown RBP12.56□□□□□ -0.4
ERBB2-220ENST00000584684 DCAF10Q5QP82 559 aa12.56□□□□□ -0.4
ERBB2-220ENST00000584684 GARNL3Q5VVW2 1013 aa12.56□□□□□ -0.4
ERBB2-220ENST00000584684 FBXO42Q6P3S6 717 aa12.56□□□□□ -0.4
ERBB2-220ENST00000584684 ZNF572Q7Z3I7 529 aaPredicted RBP12.56□□□□□ -0.4
ERBB2-220ENST00000584684 MAATS1Q7Z4T9 603 aa12.56□□□□□ -0.4
ERBB2-220ENST00000584684 PPP1R32Q7Z5V6 425 aa12.56□□□□□ -0.4
ERBB2-220ENST00000584684 SLC26A11Q86WA9 606 aa12.56□□□□□ -0.4
ERBB2-220ENST00000584684 ARHGEF39Q8N4T4 335 aa12.56□□□□□ -0.4
ERBB2-220ENST00000584684 PPFIBP2Q8ND30 876 aa12.56□□□□□ -0.4
ERBB2-220ENST00000584684 FBXO36Q8NEA4 188 aa12.56□□□□□ -0.4
ERBB2-220ENST00000584684 LINGO1Q96FE5 620 aa12.56□□□□□ -0.4
ERBB2-220ENST00000584684 PDLIM5Q96HC4 596 aaKnown RBP12.56□□□□□ -0.4
ERBB2-220ENST00000584684 FER1L6-AS2Q96M78 137 aa12.56□□□□□ -0.4
ERBB2-220ENST00000584684 ERP44Q9BS26 406 aa12.56□□□□□ -0.4
ERBB2-220ENST00000584684 TRIM31Q9BZY9 425 aa12.56□□□□□ -0.4
ERBB2-220ENST00000584684 NSMCE4AQ9NXX6 385 aa12.56□□□□□ -0.4
ERBB2-220ENST00000584684 ZFATQ9P243 1243 aa12.56□□□□□ -0.4
ERBB2-220ENST00000584684 ADAMTS6Q9UKP5 1117 aa12.56□□□□□ -0.4
ERBB2-220ENST00000584684 RP1L1Q8IWN7 2480 aaPredicted RBP12.56□□□□□ -0.4
ERBB2-220ENST00000584684 IGLV3-12A0A075B6K2 115 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 KCNE1BA0A087WTH5 132 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 VSTM2BA6NLU5 285 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 H0YGG7 62 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 PEX12O00623 359 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 TXNDC9O14530 226 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 EIF3HO15372 352 aaKnown RBP eCLIP12.55□□□□□ -0.4
ERBB2-220ENST00000584684 KLHL41O60662 606 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 MED26O95402 600 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 ENO2P09104 434 aaPredicted RBP12.55□□□□□ -0.4
ERBB2-220ENST00000584684 ZNF37AP17032 561 aaPredicted RBP12.55□□□□□ -0.4
ERBB2-220ENST00000584684 CCL11P51671 97 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 SOX8P57073 446 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 IL2P60568 153 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 ARF3P61204 181 aaPredicted RBP12.55□□□□□ -0.4
ERBB2-220ENST00000584684 CALCOCO2Q13137 446 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 PDAP1Q13442 181 aaKnown RBP12.55□□□□□ -0.4
ERBB2-220ENST00000584684 NKG7Q16617 165 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 PHKG1Q16816 387 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 HP1BP3Q5SSJ5 553 aaPredicted RBP12.55□□□□□ -0.4
ERBB2-220ENST00000584684 HECTD2Q5U5R9 776 aa12.55□□□□□ -0.4
ERBB2-220ENST00000584684 PRAMEF13Q5VWM6 474 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms