RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	JAZF1	Q86VZ6	243 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	AMIGO1	Q86WK6	493 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	KIF18B	Q86Y91	864 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	SLC13A5	Q86YT5	568 aa	Predicted RBP	5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	TMTC1	Q8IUR5	882 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	PRSS58	Q8IYP2	241 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	BEST3	Q8N1M1	668 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	RPRML	Q8N4K4	120 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	TTC29	Q8NA56	475 aa	Predicted RBP	5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	POGLUT1	Q8NBL1	392 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	GPR26	Q8NDV2	337 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	LPCAT1	Q8NF37	534 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	PERP	Q96FX8	193 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	CCDC34	Q96HJ3	373 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	FERD3L	Q96RJ6	166 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	EIF3C	Q99613	913 aa	Known RBP	5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	OLFM1	Q99784	485 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	TTYH2	Q9BSA4	534 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	TUBB6	Q9BUF5	446 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	XPO4	Q9C0E2	1151 aa	Known RBP	5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	CLSTN2	Q9H4D0	955 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	ZNF304	Q9HCX3	659 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	CUTC	Q9NTM9	273 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	ANKRD10	Q9NXR5	420 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	FAM53C	Q9NYF3	392 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	ADAMTS6	Q9UKP5	1117 aa		5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	RPL26L1	Q9UNX3	145 aa	Known RBP	5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	5.66	□□□□□ -1.5
KPNB1-209	ENST00000580158	PKD1L1	Q8TDX9	2849 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158		A0A0G2JNJ9	132 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	TMEM238L	A0A1B0GVL6	79 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	KLHL33	A6NCF5	533 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	MBD3L4	A6NDZ8	208 aa	Predicted RBP	5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	LRRC10B	A6NIK2	292 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	MBD3L5	A6NJ08	208 aa	Predicted RBP	5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	ANKRD66	B4E2M5	251 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	HCRTR1	O43613	425 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	LSM8	O95777	96 aa	Known RBP	5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	KRT3	P12035	628 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	ERCC2	P18074	760 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	FPR1	P21462	350 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	ACVR2A	P27037	513 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	GABRA4	P48169	554 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	ARSE	P51690	589 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	CDH6	P55285	790 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	FASTK	Q14296	549 aa	Known RBP	5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	GRM7	Q14831	915 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	CAMK4	Q16566	473 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	GXYLT1	Q4G148	440 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	TCTE1	Q5JU00	501 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	ZNF585A	Q6P3V2	769 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	TRIM65	Q6PJ69	517 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	SARM1	Q6SZW1	724 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	B3GNT6	Q6ZMB0	384 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	LIX1L	Q8IVB5	337 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	JOSD2	Q8TAC2	188 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	CPA5	Q8WXQ8	436 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	ROBO4	Q8WZ75	1007 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	RNASE6	Q93091	150 aa	Known RBP	5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	RBM41	Q96IZ5	413 aa	Known RBP	5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	VPS35	Q96QK1	796 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	CCL19	Q99731	98 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	MESP1	Q9BRJ9	268 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	CCM2	Q9BSQ5	444 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	SELENOO	Q9BVL4	669 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	POLR1E	Q9GZS1	481 aa	Known RBP	5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	SCAND2P	Q9GZW5	306 aa	Predicted RBP	5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	ATG10	Q9H0Y0	220 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	TFB2M	Q9H5Q4	396 aa	Known RBP	5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	KCNK13	Q9HB14	408 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	PCDH9	Q9HC56	1237 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	NPHS2	Q9NP85	383 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	NT5M	Q9NPB1	228 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	RMND1	Q9NWS8	449 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	EURL	Q9NYK6	297 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158		Q9UFV3	132 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	MAU2	Q9Y6X3	613 aa		5.65	□□□□□ -1.5
KPNB1-209	ENST00000580158	TG	P01266	2768 aa		5.65	□□□□□ -1.51
KPNB1-209	ENST00000580158		A0A0J9YY10	115 aa		5.64	□□□□□ -1.51
KPNB1-209	ENST00000580158		A0A1B0GVL5	298 aa		5.64	□□□□□ -1.51
KPNB1-209	ENST00000580158		A0A1W2PQ72	361 aa		5.64	□□□□□ -1.51
KPNB1-209	ENST00000580158	MGAT4D	A6NG13	374 aa		5.64	□□□□□ -1.51
KPNB1-209	ENST00000580158	OR2AG2	A6NM03	316 aa		5.64	□□□□□ -1.51
KPNB1-209	ENST00000580158		A8MV72	311 aa	Predicted RBP	5.64	□□□□□ -1.51
KPNB1-209	ENST00000580158	NPIPA2	E9PIF3	369 aa		5.64	□□□□□ -1.51
KPNB1-209	ENST00000580158	NPIPA3	F8WFD2	350 aa		5.64	□□□□□ -1.51
KPNB1-209	ENST00000580158	KLRC4-KLRK1	H3BQV0	150 aa		5.64	□□□□□ -1.51
KPNB1-209	ENST00000580158	FOXN3	O00409	490 aa	Predicted RBP	5.64	□□□□□ -1.51
KPNB1-209	ENST00000580158	IFRD1	O00458	451 aa	Predicted RBP	5.64	□□□□□ -1.51
KPNB1-209	ENST00000580158	HS6ST1	O60243	411 aa		5.64	□□□□□ -1.51
KPNB1-209	ENST00000580158	PDE9A	O76083	593 aa		5.64	□□□□□ -1.51
KPNB1-209	ENST00000580158	GNA14	O95837	355 aa		5.64	□□□□□ -1.51
KPNB1-209	ENST00000580158	STATH	P02808	62 aa		5.64	□□□□□ -1.51
KPNB1-209	ENST00000580158	POLB	P06746	335 aa		5.64	□□□□□ -1.51
KPNB1-209	ENST00000580158	HEXB	P07686	556 aa		5.64	□□□□□ -1.51
KPNB1-209	ENST00000580158	GSTP1	P09211	210 aa	Known RBP	5.64	□□□□□ -1.51
KPNB1-209	ENST00000580158	GLI4	P10075	376 aa		5.64	□□□□□ -1.51
KPNB1-209	ENST00000580158	THBS2	P35442	1172 aa		5.64	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms