RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 SLC6A20Q9NP91 592 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 SOHLH2Q9NX45 425 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 SNX7Q9UNH6 387 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 ANGPTL3Q9Y5C1 460 aa16.44■□□□□ 0.22
NUP88-210ENST00000574867 KATNA1O75449 491 aa16.43■□□□□ 0.22
NUP88-210ENST00000574867 JUPP14923 745 aa16.43■□□□□ 0.22
NUP88-210ENST00000574867 PVRP15151 417 aa16.43■□□□□ 0.22
NUP88-210ENST00000574867 CSTF2P33240 577 aaKnown RBP eCLIP16.43■□□□□ 0.22
NUP88-210ENST00000574867 HSP90B2PQ58FF3 399 aa16.43■□□□□ 0.22
NUP88-210ENST00000574867 FAM20CQ8IXL6 584 aa16.43■□□□□ 0.22
NUP88-210ENST00000574867 ABHD11Q8NFV4 315 aa16.43■□□□□ 0.22
NUP88-210ENST00000574867 SREK1Q8WXA9 508 aaKnown RBP16.43■□□□□ 0.22
NUP88-210ENST00000574867 NEIL2Q969S2 332 aa16.43■□□□□ 0.22
NUP88-210ENST00000574867 TMEM237Q96Q45 408 aa16.43■□□□□ 0.22
NUP88-210ENST00000574867 CMKLR1Q99788 373 aa16.43■□□□□ 0.22
NUP88-210ENST00000574867 PELI2Q9HAT8 420 aa16.43■□□□□ 0.22
NUP88-210ENST00000574867 PDE7BQ9NP56 450 aa16.43■□□□□ 0.22
NUP88-210ENST00000574867 OXSMQ9NWU1 459 aa16.43■□□□□ 0.22
NUP88-210ENST00000574867 PCTPQ9UKL6 214 aa16.43■□□□□ 0.22
NUP88-210ENST00000574867 PTPRBP23467 1997 aa16.43■□□□□ 0.22
NUP88-210ENST00000574867 IGKV1-8A0A0C4DH67 115 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 IMPDH1P20839 514 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 MLLT3P42568 568 aaPredicted RBP16.42■□□□□ 0.22
NUP88-210ENST00000574867 SEPHS1P49903 392 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 DNAJB13P59910 316 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 GPS2Q13227 327 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 C16orf72Q14CZ0 275 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 ZNF678Q5SXM1 525 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 TMTC4Q5T4D3 741 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 LIPMQ5VYY2 423 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 ZNF425Q6IV72 752 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 FIGLAQ6QHK4 219 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 D2HGDHQ8N465 521 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 PLCD4Q9BRC7 762 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 EHD1Q9H4M9 534 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 MED4Q9NPJ6 270 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 TMEM184CQ9NVA4 438 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 CUEDC1Q9NWM3 386 aaPredicted RBP16.42■□□□□ 0.22
NUP88-210ENST00000574867 NKIRAS1Q9NYS0 192 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 SH2B3Q9UQQ2 575 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 CCDC187A0A096LP49 1063 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 OR2A25A4D2G3 310 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 CLGNO14967 610 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 CDH1P12830 882 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 EZRP15311 586 aaKnown RBP16.42■□□□□ 0.22
NUP88-210ENST00000574867 CCR8P51685 355 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 RELAQ04206 551 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 GTF2H2Q13888 395 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 GTF2H2CQ6P1K8 395 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 CYB5D1Q6P9G0 228 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 DGLUCYQ7Z3D6 616 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 ADCK2Q7Z695 626 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 TMPRSS11BQ86T26 416 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 TEX9Q8N6V9 391 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 SELENOSQ9BQE4 189 aa16.42■□□□□ 0.22
NUP88-210ENST00000574867 LRRC14BA6NHZ5 514 aa16.41■□□□□ 0.22
NUP88-210ENST00000574867 E7EQ34 232 aa16.41■□□□□ 0.22
NUP88-210ENST00000574867 MSL3P1P0C860 447 aa16.41■□□□□ 0.22
NUP88-210ENST00000574867 YBX1P67809 324 aaKnown RBP16.41■□□□□ 0.22
NUP88-210ENST00000574867 PCDH1Q08174 1060 aa16.41■□□□□ 0.22
NUP88-210ENST00000574867 TARDBPQ13148 414 aaKnown RBP eCLIP16.41■□□□□ 0.22
NUP88-210ENST00000574867 MPP2Q14168 576 aa16.41■□□□□ 0.22
NUP88-210ENST00000574867 FCRL6Q6DN72 434 aa16.41■□□□□ 0.22
NUP88-210ENST00000574867 GOLGA7Q7Z5G4 137 aa16.41■□□□□ 0.22
NUP88-210ENST00000574867 PAQR7Q86WK9 346 aa16.41■□□□□ 0.22
NUP88-210ENST00000574867 C10orf107Q8IVU9 208 aa16.41■□□□□ 0.22
NUP88-210ENST00000574867 CHCHD4Q8N4Q1 142 aa16.41■□□□□ 0.22
NUP88-210ENST00000574867 PPP4R1Q8TF05 950 aa16.41■□□□□ 0.22
NUP88-210ENST00000574867 ZNF483Q8TF39 744 aaPredicted RBP16.41■□□□□ 0.22
NUP88-210ENST00000574867 KLHL25Q9H0H3 589 aa16.41■□□□□ 0.22
NUP88-210ENST00000574867 KLHL20Q9Y2M5 609 aa16.41■□□□□ 0.22
NUP88-210ENST00000574867 H7BY64 318 aa16.41■□□□□ 0.22
NUP88-210ENST00000574867 TRIM13O60858 407 aa16.41■□□□□ 0.22
NUP88-210ENST00000574867 DHRS4L1P0CG22 281 aa16.41■□□□□ 0.22
NUP88-210ENST00000574867 HPDP32754 393 aaPredicted RBP16.41■□□□□ 0.22
NUP88-210ENST00000574867 GRK3P35626 688 aa16.41■□□□□ 0.22
NUP88-210ENST00000574867 SERPINB4P48594 390 aa16.41■□□□□ 0.22
NUP88-210ENST00000574867 ZIC1Q15915 447 aa16.41■□□□□ 0.22
NUP88-210ENST00000574867 ATG9BQ674R7 924 aa16.41■□□□□ 0.22
NUP88-210ENST00000574867 NXPE4Q6UWF7 544 aa16.41■□□□□ 0.22
NUP88-210ENST00000574867 ANKRD42Q8N9B4 389 aa16.41■□□□□ 0.22
NUP88-210ENST00000574867 PRAP1Q96NZ9 151 aa16.41■□□□□ 0.22
NUP88-210ENST00000574867 SIDT1Q9NXL6 827 aaKnown RBP16.41■□□□□ 0.22
NUP88-210ENST00000574867 STK38LQ9Y2H1 464 aa16.41■□□□□ 0.22
NUP88-210ENST00000574867 LOXL2Q9Y4K0 774 aa16.41■□□□□ 0.22
NUP88-210ENST00000574867 HEATR5BQ9P2D3 2071 aa16.4■□□□□ 0.22
NUP88-210ENST00000574867 BIRC5O15392 142 aa16.4■□□□□ 0.22
NUP88-210ENST00000574867 SUPT7LO94864 414 aa16.4■□□□□ 0.22
NUP88-210ENST00000574867 BPGMP07738 259 aa16.4■□□□□ 0.22
NUP88-210ENST00000574867 EPORP19235 508 aa16.4■□□□□ 0.22
NUP88-210ENST00000574867 ALDH3A1P30838 453 aa16.4■□□□□ 0.22
NUP88-210ENST00000574867 CSNK1G2P78368 415 aa16.4■□□□□ 0.22
NUP88-210ENST00000574867 ACY1Q03154 408 aa16.4■□□□□ 0.22
NUP88-210ENST00000574867 TBCCQ15814 346 aa16.4■□□□□ 0.22
NUP88-210ENST00000574867 ZC3H12BQ5HYM0 836 aaKnown RBP16.4■□□□□ 0.22
NUP88-210ENST00000574867 SLCO4C1Q6ZQN7 724 aa16.4■□□□□ 0.22
NUP88-210ENST00000574867 RNF44Q7L0R7 432 aa16.4■□□□□ 0.22
NUP88-210ENST00000574867 RAB11FIP2Q7L804 512 aa16.4■□□□□ 0.22
NUP88-210ENST00000574867 TBC1D19Q8N5T2 526 aa16.4■□□□□ 0.22
NUP88-210ENST00000574867 OR4K1Q8NGD4 311 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms