RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 HPDLQ96IR7 371 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 B3GALT6Q96L58 329 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 CBWD1Q9BRT8 395 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 C1QTNF1Q9BXJ1 281 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 S1PR5Q9H228 398 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 CXCL16Q9H2A7 254 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 MMP25Q9NPA2 562 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 HINT3Q9NQE9 182 aaKnown RBP3.92□□□□□ -1.78
NUP88-202ENST00000570937 DONSONQ9NYP3 566 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 MTRRQ9UBK8 725 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 CACNG4Q9UBN1 327 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 TRAF3IP3Q9Y228 551 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 CRYL1Q9Y2S2 319 aa3.92□□□□□ -1.78
NUP88-202ENST00000570937 PRRC2BQ5JSZ5 2229 aaKnown RBP3.92□□□□□ -1.78
NUP88-202ENST00000570937 A0A0G2JPF8 293 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 LOC730098B7Z3J9 87 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 HNRNPCL3B7ZW38 293 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 ZNF197O14709 1029 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 TGFB1I1O43294 461 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 DCXO43602 365 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 KLRC4O43908 158 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 HNRNPCL1O60812 293 aaKnown RBP3.91□□□□□ -1.78
NUP88-202ENST00000570937 FGFR1OPO95684 399 aaKnown RBP3.91□□□□□ -1.78
NUP88-202ENST00000570937 FTCDO95954 541 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 IGLV2-11P01706 119 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 HNRNPCL4P0DMR1 293 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 EPB41P11171 864 aaKnown RBP3.91□□□□□ -1.78
NUP88-202ENST00000570937 G6PDP11413 515 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 AMD1P17707 334 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 DGKAP23743 735 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 RRM1P23921 792 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 NR2F2P24468 414 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 EPHA8P29322 1005 aaPredicted RBP3.91□□□□□ -1.78
NUP88-202ENST00000570937 GTF2H1P32780 548 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 HOXD13P35453 343 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 BRCC3P46736 316 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 CLCNKAP51800 687 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 HNRNPH2P55795 449 aaKnown RBP3.91□□□□□ -1.78
NUP88-202ENST00000570937 KRTAP10-6P60371 365 aaPredicted RBP3.91□□□□□ -1.78
NUP88-202ENST00000570937 TNNC1P63316 161 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 FKBP3Q00688 224 aaKnown RBP3.91□□□□□ -1.78
NUP88-202ENST00000570937 MYL7Q01449 175 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 LRRC63Q05C16 580 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 CYP24A1Q07973 514 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 CETN1Q12798 172 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 PNOCQ13519 176 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 NAE1Q13564 534 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 PSMD6Q15008 389 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 CTF1Q16619 201 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 EIF2S3LQ2VIR3 472 aaKnown RBP3.91□□□□□ -1.78
NUP88-202ENST00000570937 ZNF628Q5EBL2 1059 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 C6orf141Q5SZD1 244 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 CYP4A22Q5TCH4 519 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 GGNBP1Q5YKI7 109 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 KCTD18Q6PI47 426 aaPredicted RBP3.91□□□□□ -1.78
NUP88-202ENST00000570937 CD300LGQ6UXG3 332 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 C9orf139Q6ZV77 190 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 SMIM29Q86T20 159 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 ITIH5Q86UX2 942 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 CBWD2Q8IUF1 395 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 ARMC8Q8IUR7 673 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 UBALD2Q8IYN6 164 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 TTC39CQ8N584 583 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 TRIML1Q8N9V2 468 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 TDRD5Q8NAT2 981 aaKnown RBP3.91□□□□□ -1.78
NUP88-202ENST00000570937 KIAA0895Q8NCT3 520 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 CADM4Q8NFZ8 388 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 SUSD6Q92537 303 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 RND1Q92730 232 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 TAF4BQ92750 862 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 DHTKD1Q96HY7 919 aaPredicted RBP3.91□□□□□ -1.78
NUP88-202ENST00000570937 RPGRIP1Q96KN7 1286 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 SENP8Q96LD8 212 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 ACBD6Q9BR61 282 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 GPR88Q9GZN0 384 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 PAIP1Q9H074 479 aaKnown RBP3.91□□□□□ -1.78
NUP88-202ENST00000570937 GOLPH3LQ9H4A5 285 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 TXLNGQ9NUQ3 528 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 GDAP2Q9NXN4 497 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 EHD2Q9NZN4 543 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 FBXL5Q9UKA1 691 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 FBXW11Q9UKB1 542 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 ERVK-11Q9UQG0 969 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 NAALADL1Q9UQQ1 740 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 ASB3Q9Y575 518 aa3.91□□□□□ -1.78
NUP88-202ENST00000570937 COL4A4P53420 1690 aaPredicted RBP3.9□□□□□ -1.78
NUP88-202ENST00000570937 TDRD15B5MCY1 1934 aaKnown RBP3.9□□□□□ -1.78
NUP88-202ENST00000570937 LRRC53A6NM62 1247 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 PI4K2BG5E9Z4 385 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 CCL16O15467 120 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 SEC31AO94979 1220 aaKnown RBP3.9□□□□□ -1.79
NUP88-202ENST00000570937 GNA14O95837 355 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 GNL1P36915 607 aaPredicted RBP3.9□□□□□ -1.79
NUP88-202ENST00000570937 PRCPP42785 496 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 VAMP7P51809 220 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 EIF3BP55884 814 aaKnown RBP3.9□□□□□ -1.79
NUP88-202ENST00000570937 RPL10AP62906 217 aaKnown RBP3.9□□□□□ -1.79
NUP88-202ENST00000570937 SORDQ00796 357 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 ROR1Q01973 937 aa3.9□□□□□ -1.79
NUP88-202ENST00000570937 ARL16Q0P5N6 197 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms