RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 CACNG2Q9Y698 323 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 CEP350Q5VT06 3117 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 NUP210Q8TEM1 1887 aaPredicted RBP3.47□□□□□ -1.85
SMG6-208ENST00000570874 MYO7AQ13402 2215 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 CCDC187A0A096LP49 1063 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 FAM237BA0A1B0GVD1 139 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 ELOVL7A1L3X0 281 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 OR2A25A4D2G3 310 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 HELTA6NFD8 242 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 TMEM191CA6NGB0 347 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 OR6C70A6NIJ9 312 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 A8MXQ7 604 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 KBTBD13C9JR72 458 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 K7EQM0 130 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 CYB561D2O14569 222 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 GPR171O14626 319 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 AIM2O14862 343 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 SLC30A4O14863 429 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 RGS13O14921 159 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 SYN3O14994 580 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 SHOXO15266 292 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 EIF3HO15372 352 aaKnown RBP eCLIP3.46□□□□□ -1.86
SMG6-208ENST00000570874 PAPSS1O43252 624 aaPredicted RBP3.46□□□□□ -1.86
SMG6-208ENST00000570874 DNPH1O43598 174 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 ADAM11O75078 769 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 PROSCO94903 275 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 OR6B1O95007 311 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 NSA2O95478 260 aaKnown RBP3.46□□□□□ -1.86
SMG6-208ENST00000570874 LSM8O95777 96 aaKnown RBP3.46□□□□□ -1.86
SMG6-208ENST00000570874 SYF2O95926 243 aaKnown RBP3.46□□□□□ -1.86
SMG6-208ENST00000570874 CALB1P05937 261 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 CD48P09326 243 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 PAEPP09466 180 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 OR4Q2P0C623 313 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 LCP1P13796 627 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 CPB1P15086 417 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 ACPPP15309 386 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 FOSL2P15408 326 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 SELPP16109 830 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 PTPN1P18031 435 aaKnown RBP3.46□□□□□ -1.86
SMG6-208ENST00000570874 EGR1P18146 543 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 TNFRSF1AP19438 455 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 NR1D1P20393 614 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 MSR1P21757 451 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 WARSP23381 471 aaKnown RBP3.46□□□□□ -1.86
SMG6-208ENST00000570874 ACP1P24666 158 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 POU1F1P28069 291 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 CRABP2P29373 138 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 HOXA9P31269 272 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 MC5RP33032 325 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 GRK3P35626 688 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 FRKP42685 505 aaPredicted RBP3.46□□□□□ -1.86
SMG6-208ENST00000570874 CRATP43155 626 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 GPR4P46093 362 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 SLC1A6P48664 564 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 PIK3CGP48736 1102 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 SLC9A3P48764 834 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 NDUFV1P49821 464 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 TAF6P49848 677 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 CLCN5P51795 746 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 EPHB3P54753 998 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 AIF1P55008 147 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 MTTPP55157 894 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 ITGA1P56199 1179 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 SESN2P58004 480 aaPredicted RBP3.46□□□□□ -1.86
SMG6-208ENST00000570874 LILRA4P59901 499 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 YWHAGP61981 247 aaKnown RBP eCLIP3.46□□□□□ -1.86
SMG6-208ENST00000570874 PITX1P78337 314 aaPredicted RBP3.46□□□□□ -1.86
SMG6-208ENST00000570874 CDC42EP1Q00587 391 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 PLOD1Q02809 727 aaPredicted RBP3.46□□□□□ -1.86
SMG6-208ENST00000570874 GUCY2DQ02846 1103 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 GLO1Q04760 184 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 PCDH1Q08174 1060 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 TGM3Q08188 693 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 ILF2Q12905 390 aaKnown RBP3.46□□□□□ -1.86
SMG6-208ENST00000570874 SLAQ13239 276 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 CUL3Q13618 768 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 IL10RAQ13651 578 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 GPR176Q14439 515 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 NR0B2Q15466 257 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 UAP1Q16222 522 aaPredicted RBP3.46□□□□□ -1.86
SMG6-208ENST00000570874 SSX2Q16385 188 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 SGCAQ16586 387 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 KYAT1Q16773 422 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 CDO1Q16878 200 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 KLHL38Q2WGJ6 581 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 SPATS1Q496A3 300 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 HIKESHIQ53FT3 197 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 TAF1BQ53T94 588 aaPredicted RBP3.46□□□□□ -1.86
SMG6-208ENST00000570874 ZNF789Q5FWF6 425 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 PAGE2BQ5JRK9 111 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 RALGPS1Q5JS13 557 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 SPANXN2Q5MJ10 180 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 PHYHD1Q5SRE7 291 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 CEP85LQ5SZL2 805 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 FAM102AQ5T9C2 384 aaPredicted RBP3.46□□□□□ -1.86
SMG6-208ENST00000570874 SEL1L2Q5TEA6 688 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 C6orf163Q5TEZ5 329 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 AGBL2Q5U5Z8 902 aa3.46□□□□□ -1.86
SMG6-208ENST00000570874 SIGIRRQ6IA17 410 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms