RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 PRAMEF33A0A0G2JMD5 474 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 CASTOR2A6NHX0 329 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 OR6C75A6NL08 312 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 BBIP1A8MTZ0 92 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 TARM1B6A8C7 271 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 E9PAM4 449 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 F2RL2O00254 374 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 TAF4O00268 1085 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 DFFAO00273 331 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 PRAMEF10O60809 474 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 USP12O75317 370 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 VPS4BO75351 444 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 ZFPL1O95159 310 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 OAZ2O95190 189 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 RTN3O95197 1032 aaPredicted RBP5.19□□□□□ -1.58
CAPN3-217ENST00000567817 PIGNO95427 931 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 IL33O95760 270 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 BAG2O95816 211 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 FGF1P05230 155 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 UQCRBP14927 111 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 ITGAXP20702 1163 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 OGNP20774 298 aaKnown RBP5.19□□□□□ -1.58
CAPN3-217ENST00000567817 ME2P23368 584 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 BDNFP23560 247 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 PIK3R1P27986 724 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 NMBRP28336 390 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 PBX3P40426 434 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 ARCN1P48444 511 aaKnown RBP5.19□□□□□ -1.58
CAPN3-217ENST00000567817 ACADVLP49748 655 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 NUDT2P50583 147 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 STARD6P59095 220 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 PITX1P78337 314 aaPredicted RBP5.19□□□□□ -1.58
CAPN3-217ENST00000567817 PIGFQ07326 219 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 ELAVL2Q12926 359 aaKnown RBP5.19□□□□□ -1.58
CAPN3-217ENST00000567817 GRIK2Q13002 908 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 CUL3Q13618 768 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 GRM3Q14832 879 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 GEN1Q17RS7 908 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 ARL13AQ5H913 290 aaPredicted RBP5.19□□□□□ -1.58
CAPN3-217ENST00000567817 COQ5Q5HYK3 327 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 CERCAMQ5T4B2 595 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 MARC1Q5VT66 337 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 CES4AQ5XG92 561 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 FAM45BPQ6NSW5 357 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 MRNIPQ6NTE8 343 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 PRMT9Q6P2P2 845 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 IZUMO2Q6UXV1 221 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 Q6ZNX1 250 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 USP45Q70EL2 814 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 PDSS2Q86YH6 399 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 ARHGAP12Q8IWW6 846 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 MAML2Q8IZL2 1156 aaPredicted RBP5.19□□□□□ -1.58
CAPN3-217ENST00000567817 NUP93Q8N1F7 819 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 LRRC43Q8N309 656 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 LNX2Q8N448 690 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 FSTL5Q8N475 847 aaPredicted RBP5.19□□□□□ -1.58
CAPN3-217ENST00000567817 SLC44A3Q8N4M1 653 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 TEX26Q8N6G2 289 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 ATP6V0D2Q8N8Y2 350 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 TMIEQ8NEW7 156 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 FAM45AQ8TCE6 357 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 SLC26A7Q8TE54 656 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 NDRG1Q92597 394 aaKnown RBP5.19□□□□□ -1.58
CAPN3-217ENST00000567817 RGMAQ96B86 450 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 HSPBAP1Q96EW2 488 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 IMP4Q96G21 291 aaKnown RBP5.19□□□□□ -1.58
CAPN3-217ENST00000567817 SLC39A13Q96H72 371 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 BTN2A3PQ96KV6 586 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 LRGUKQ96M69 825 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 ZNF558Q96NG5 402 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 KLHL5Q96PQ7 755 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 NELL2Q99435 816 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 CCT7Q99832 543 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 SLC25A23Q9BV35 468 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 FICDQ9BVA6 458 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 TRIM15Q9C019 465 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 ZCWPW1Q9H0M4 648 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 ZNF385DQ9H6B1 395 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 SYTL2Q9HCH5 934 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 PRMT8Q9NR22 394 aaPredicted RBP5.19□□□□□ -1.58
CAPN3-217ENST00000567817 TMEM248Q9NWD8 314 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 PLK2Q9NYY3 685 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 SPG21Q9NZD8 308 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 RALYQ9UKM9 306 aaKnown RBP5.19□□□□□ -1.58
CAPN3-217ENST00000567817 FBXO5Q9UKT4 447 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 RAB26Q9ULW5 256 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 PADI3Q9ULW8 664 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 NEU3Q9UQ49 428 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 RUVBL2Q9Y230 463 aaKnown RBP5.19□□□□□ -1.58
CAPN3-217ENST00000567817 ASB3Q9Y575 518 aa5.19□□□□□ -1.58
CAPN3-217ENST00000567817 ZFP37Q9Y6Q3 630 aaPredicted RBP5.19□□□□□ -1.58
CAPN3-217ENST00000567817 HELZ2Q9BYK8 2649 aaKnown RBP5.19□□□□□ -1.58
CAPN3-217ENST00000567817 IGF2RP11717 2491 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 NAV2Q8IVL1 2488 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 CACNA1IQ9P0X4 2223 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 IGLV3-10A0A075B6K4 115 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 TRGV11A0A075B6L2 103 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.18□□□□□ -1.58
CAPN3-217ENST00000567817 KANSL1LA0AUZ9 987 aa5.18□□□□□ -1.58
CAPN3-217ENST00000567817 FAM92AA1XBS5 289 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms