RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 OR2A25A4D2G3 310 aa12.36□□□□□ -0.43
SF3B3-202ENST00000562722 IDSB3KWA1 339 aa12.36□□□□□ -0.43
SF3B3-202ENST00000562722 GOLGA8KD6RF30 607 aa12.36□□□□□ -0.43
SF3B3-202ENST00000562722 H0YGG7 62 aa12.36□□□□□ -0.43
SF3B3-202ENST00000562722 GOLGA8TH3BQL2 631 aa12.36□□□□□ -0.43
SF3B3-202ENST00000562722 NIPSNAP2O75323 286 aa12.36□□□□□ -0.43
SF3B3-202ENST00000562722 VAPBO95292 243 aa12.36□□□□□ -0.43
SF3B3-202ENST00000562722 SERPINA7P05543 415 aa12.36□□□□□ -0.43
SF3B3-202ENST00000562722 CHRM3P20309 590 aa12.36□□□□□ -0.43
SF3B3-202ENST00000562722 FDXRP22570 491 aa12.36□□□□□ -0.43
SF3B3-202ENST00000562722 RPL22P35268 128 aaKnown RBP12.36□□□□□ -0.43
SF3B3-202ENST00000562722 ARF3P61204 181 aaPredicted RBP12.36□□□□□ -0.43
SF3B3-202ENST00000562722 YBX1P67809 324 aaKnown RBP12.36□□□□□ -0.43
SF3B3-202ENST00000562722 DSG2Q14126 1118 aa12.36□□□□□ -0.43
SF3B3-202ENST00000562722 ANKRD20A4Q4UJ75 823 aa12.36□□□□□ -0.43
SF3B3-202ENST00000562722 CTSL3PQ5NE16 218 aa12.36□□□□□ -0.43
SF3B3-202ENST00000562722 RNF187Q5TA31 235 aaPredicted RBP12.36□□□□□ -0.43
SF3B3-202ENST00000562722 ATG9BQ674R7 924 aa12.36□□□□□ -0.43
SF3B3-202ENST00000562722 RPUSD3Q6P087 351 aaKnown RBP12.36□□□□□ -0.43
SF3B3-202ENST00000562722 SUSD1Q6UWL2 747 aa12.36□□□□□ -0.43
SF3B3-202ENST00000562722 CES3Q6UWW8 571 aa12.36□□□□□ -0.43
SF3B3-202ENST00000562722 GFRALQ6UXV0 394 aa12.36□□□□□ -0.43
SF3B3-202ENST00000562722 ADCK2Q7Z695 626 aa12.36□□□□□ -0.43
SF3B3-202ENST00000562722 LAPTM4BQ86VI4 370 aa12.36□□□□□ -0.43
SF3B3-202ENST00000562722 OR9A1PQ8NGU1 263 aa12.36□□□□□ -0.43
SF3B3-202ENST00000562722 SMPDL3AQ92484 453 aa12.36□□□□□ -0.43
SF3B3-202ENST00000562722 MOCOSQ96EN8 888 aa12.36□□□□□ -0.43
SF3B3-202ENST00000562722 EIF2B3Q9NR50 452 aaKnown RBP12.36□□□□□ -0.43
SF3B3-202ENST00000562722 FAM114A2Q9NRY5 505 aa12.36□□□□□ -0.43
SF3B3-202ENST00000562722 TREX1Q9NSU2 369 aa12.36□□□□□ -0.43
SF3B3-202ENST00000562722 C14orf105Q9NVL8 296 aa12.36□□□□□ -0.43
SF3B3-202ENST00000562722 RIC8BQ9NVN3 520 aa12.36□□□□□ -0.43
SF3B3-202ENST00000562722 UTP6Q9NYH9 597 aaKnown RBP12.36□□□□□ -0.43
SF3B3-202ENST00000562722 RUVBL1Q9Y265 456 aaKnown RBP12.36□□□□□ -0.43
SF3B3-202ENST00000562722 MRPS2Q9Y399 296 aaKnown RBP12.36□□□□□ -0.43
SF3B3-202ENST00000562722 CROCCQ5TZA2 2017 aa12.36□□□□□ -0.43
SF3B3-202ENST00000562722 ANKRD12Q6UB98 2062 aa12.36□□□□□ -0.43
SF3B3-202ENST00000562722 TRGV8A0A0C4DH27 118 aa12.35□□□□□ -0.43
SF3B3-202ENST00000562722 E5RI56 91 aa12.35□□□□□ -0.43
SF3B3-202ENST00000562722 H3BMM5 538 aa12.35□□□□□ -0.43
SF3B3-202ENST00000562722 AP3B1O00203 1094 aa12.35□□□□□ -0.43
SF3B3-202ENST00000562722 PHF2O75151 1096 aa12.35□□□□□ -0.43
SF3B3-202ENST00000562722 CCNDBP1O95273 360 aa12.35□□□□□ -0.43
SF3B3-202ENST00000562722 CATP04040 527 aaKnown RBP12.35□□□□□ -0.43
SF3B3-202ENST00000562722 STSP08842 583 aa12.35□□□□□ -0.43
SF3B3-202ENST00000562722 MGAT1P26572 445 aa12.35□□□□□ -0.43
SF3B3-202ENST00000562722 SOX11P35716 441 aa12.35□□□□□ -0.43
SF3B3-202ENST00000562722 NPY2RP49146 381 aa12.35□□□□□ -0.43
SF3B3-202ENST00000562722 TNFSF10P50591 281 aa12.35□□□□□ -0.43
SF3B3-202ENST00000562722 TERF1P54274 439 aa12.35□□□□□ -0.43
SF3B3-202ENST00000562722 INAQ16352 499 aa12.35□□□□□ -0.43
SF3B3-202ENST00000562722 HKDC1Q2TB90 917 aa12.35□□□□□ -0.43
SF3B3-202ENST00000562722 PRTGQ2VWP7 1150 aa12.35□□□□□ -0.43
SF3B3-202ENST00000562722 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.35□□□□□ -0.43
SF3B3-202ENST00000562722 SP5Q6BEB4 398 aaPredicted RBP12.35□□□□□ -0.43
SF3B3-202ENST00000562722 FBXO42Q6P3S6 717 aa12.35□□□□□ -0.43
SF3B3-202ENST00000562722 RNF10Q8N5U6 811 aaKnown RBP12.35□□□□□ -0.43
SF3B3-202ENST00000562722 SUN3Q8TAQ9 357 aa12.35□□□□□ -0.43
SF3B3-202ENST00000562722 NR4A3Q92570 626 aa12.35□□□□□ -0.43
SF3B3-202ENST00000562722 MVB12AQ96EY5 273 aa12.35□□□□□ -0.43
SF3B3-202ENST00000562722 PLCD4Q9BRC7 762 aa12.35□□□□□ -0.43
SF3B3-202ENST00000562722 TRIM56Q9BRZ2 755 aaKnown RBP12.35□□□□□ -0.43
SF3B3-202ENST00000562722 UNKQ9C0B0 810 aaKnown RBP12.35□□□□□ -0.43
SF3B3-202ENST00000562722 RUBCNLQ9H714 662 aa12.35□□□□□ -0.43
SF3B3-202ENST00000562722 SUCOQ9UBS9 1254 aaKnown RBP12.35□□□□□ -0.43
SF3B3-202ENST00000562722 TAC3Q9UHF0 121 aa12.35□□□□□ -0.43
SF3B3-202ENST00000562722 GUCA1BQ9UMX6 200 aa12.35□□□□□ -0.43
SF3B3-202ENST00000562722 DRG1Q9Y295 367 aaKnown RBP12.35□□□□□ -0.43
SF3B3-202ENST00000562722 CRYL1Q9Y2S2 319 aa12.35□□□□□ -0.43
SF3B3-202ENST00000562722 MDC1Q14676 2089 aaKnown RBP12.34□□□□□ -0.43
SF3B3-202ENST00000562722 IGLV3-12A0A075B6K2 115 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 IGHV1-45A0A0A0MS14 117 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 A0A0A6YYC8 382 aaPredicted RBP12.34□□□□□ -0.43
SF3B3-202ENST00000562722 ZNF839A8K0R7 811 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 ARHGEF33A8MVX0 844 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 I3L1I5 382 aaPredicted RBP12.34□□□□□ -0.43
SF3B3-202ENST00000562722 PCDH17O14917 1159 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 UNC5CO95185 931 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 BMP10O95393 424 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 MATN4O95460 622 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 SYF2O95926 243 aaKnown RBP12.34□□□□□ -0.43
SF3B3-202ENST00000562722 ESR1P03372 595 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 CELA2AP08217 269 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 PRF1P14222 555 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 PKMP14618 531 aaKnown RBP12.34□□□□□ -0.43
SF3B3-202ENST00000562722 ATP5DP30049 168 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 EMP3P54852 163 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 AP2B1P63010 937 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 ZNF33BQ06732 778 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 KLHL38Q2WGJ6 581 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 ACSBG2Q5FVE4 666 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 THEMIS2Q5TEJ8 643 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 MFSD4BQ5TF39 518 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 ABHD17BQ5VST6 288 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 HIBCHQ6NVY1 386 aaPredicted RBP12.34□□□□□ -0.43
SF3B3-202ENST00000562722 LRRC8BQ6P9F7 803 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 PAQR7Q86WK9 346 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 PPFIBP2Q8ND30 876 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 PSMF1Q92530 271 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 LPGAT1Q92604 370 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms