RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 C8orf82Q6P1X6 216 aaPredicted RBP16.53■□□□□ 0.24
HDDC3-206ENST00000561036 SUSD1Q6UWL2 747 aa16.53■□□□□ 0.24
HDDC3-206ENST00000561036 C17orf64Q86WR6 236 aa16.53■□□□□ 0.24
HDDC3-206ENST00000561036 DCP2Q8IU60 420 aaKnown RBP16.53■□□□□ 0.24
HDDC3-206ENST00000561036 KRT78Q8N1N4 520 aa16.53■□□□□ 0.24
HDDC3-206ENST00000561036 CADM4Q8NFZ8 388 aa16.53■□□□□ 0.24
HDDC3-206ENST00000561036 OR2L8Q8NGY9 312 aa16.53■□□□□ 0.24
HDDC3-206ENST00000561036 TSACCQ96A04 125 aaPredicted RBP16.53■□□□□ 0.24
HDDC3-206ENST00000561036 CLPTM1LQ96KA5 538 aa16.53■□□□□ 0.24
HDDC3-206ENST00000561036 CDRT15Q96T59 188 aa16.53■□□□□ 0.24
HDDC3-206ENST00000561036 ACTL8Q9H568 366 aa16.53■□□□□ 0.24
HDDC3-206ENST00000561036 NT5DC2Q9H857 520 aa16.53■□□□□ 0.24
HDDC3-206ENST00000561036 PRDM8Q9NQV8 689 aa16.53■□□□□ 0.24
HDDC3-206ENST00000561036 IMP3Q9NV31 184 aaKnown RBP16.53■□□□□ 0.24
HDDC3-206ENST00000561036 GEMIN8Q9NWZ8 242 aaKnown RBP16.53■□□□□ 0.24
HDDC3-206ENST00000561036 BAIAP2L1Q9UHR4 511 aa16.53■□□□□ 0.24
HDDC3-206ENST00000561036 LEF1Q9UJU2 399 aaPredicted RBP16.53■□□□□ 0.24
HDDC3-206ENST00000561036 CROTQ9UKG9 612 aa16.53■□□□□ 0.24
HDDC3-206ENST00000561036 PIPSLA2A3N6 862 aa16.52■□□□□ 0.24
HDDC3-206ENST00000561036 CCDC154A6NI56 674 aa16.52■□□□□ 0.24
HDDC3-206ENST00000561036 CFLARO15519 480 aa16.52■□□□□ 0.24
HDDC3-206ENST00000561036 NDUFS2O75306 463 aa16.52■□□□□ 0.24
HDDC3-206ENST00000561036 BCKDHAP12694 445 aa16.52■□□□□ 0.24
HDDC3-206ENST00000561036 AMD1P17707 334 aa16.52■□□□□ 0.24
HDDC3-206ENST00000561036 SERPINB1P30740 379 aa16.52■□□□□ 0.24
HDDC3-206ENST00000561036 ACTR3P61158 418 aa16.52■□□□□ 0.24
HDDC3-206ENST00000561036 PHEXP78562 749 aa16.52■□□□□ 0.24
HDDC3-206ENST00000561036 KPNB1Q14974 876 aaKnown RBP16.52■□□□□ 0.24
HDDC3-206ENST00000561036 SPATS1Q496A3 300 aa16.52■□□□□ 0.24
HDDC3-206ENST00000561036 VPS26BQ4G0F5 336 aa16.52■□□□□ 0.24
HDDC3-206ENST00000561036 PIGGQ5H8A4 983 aa16.52■□□□□ 0.24
HDDC3-206ENST00000561036 PRR23BQ6ZRT6 265 aa16.52■□□□□ 0.24
HDDC3-206ENST00000561036 LIX1Q8N485 282 aa16.52■□□□□ 0.24
HDDC3-206ENST00000561036 MINDY1Q8N5J2 469 aa16.52■□□□□ 0.24
HDDC3-206ENST00000561036 ABHD11Q8NFV4 315 aa16.52■□□□□ 0.24
HDDC3-206ENST00000561036 PJA1Q8NG27 643 aa16.52■□□□□ 0.24
HDDC3-206ENST00000561036 OR13H1Q8NG92 308 aa16.52■□□□□ 0.24
HDDC3-206ENST00000561036 MAFAQ8NHW3 353 aaPredicted RBP16.52■□□□□ 0.24
HDDC3-206ENST00000561036 SH3KBP1Q96B97 665 aa16.52■□□□□ 0.24
HDDC3-206ENST00000561036 TEX37Q96LM6 180 aa16.52■□□□□ 0.24
HDDC3-206ENST00000561036 DPY30Q9C005 99 aa16.52■□□□□ 0.24
HDDC3-206ENST00000561036 MAPRE3Q9UPY8 281 aa16.52■□□□□ 0.24
HDDC3-206ENST00000561036 PCDHGA7Q9Y5G6 932 aa16.52■□□□□ 0.24
HDDC3-206ENST00000561036 XIRP2A4UGR9 3374 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 PRMT3O60678 531 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 MYO1DO94832 1006 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 RASGRP1O95267 797 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 PCNAP12004 261 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 CDH1P12830 882 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 CD27P26842 260 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 IL12AP29459 219 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 HNRNPH1P31943 449 aaKnown RBP16.51■□□□□ 0.23
HDDC3-206ENST00000561036 CCR8P51685 355 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 CLNS1AP54105 237 aaKnown RBP16.51■□□□□ 0.23
HDDC3-206ENST00000561036 CLDN8P56748 225 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 ILF3Q12906 894 aaKnown RBP eCLIP16.51■□□□□ 0.23
HDDC3-206ENST00000561036 TLR1Q15399 786 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 CATSPEREQ5SY80 951 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 C1orf146Q5VVC0 180 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 DUS1LQ6P1R4 473 aaKnown RBP16.51■□□□□ 0.23
HDDC3-206ENST00000561036 RIPOR1Q6ZS17 1223 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 RD3Q7Z3Z2 195 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 RETREG3Q86VR2 466 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 FAM129CQ86XR2 697 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 HID1Q8IV36 788 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 DPP10Q8N608 796 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 HUS1BQ8NHY5 278 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 WDR60Q8WVS4 1066 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 ZFPM2Q8WW38 1151 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 ORAI3Q9BRQ5 295 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 GPATCH1Q9BRR8 931 aaKnown RBP16.51■□□□□ 0.23
HDDC3-206ENST00000561036 TMEM168Q9H0V1 697 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 DCLRE1BQ9H816 532 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 SPAG4Q9NPE6 437 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 SIRT5Q9NXA8 310 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 MAP10Q9P2G4 905 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 TBC1D29Q9UFV1 150 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 BCAP29Q9UHQ4 241 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 SH2B3Q9UQQ2 575 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 RUVBL1Q9Y265 456 aaKnown RBP16.51■□□□□ 0.23
HDDC3-206ENST00000561036 PCDHB11Q9Y5F2 797 aa16.51■□□□□ 0.23
HDDC3-206ENST00000561036 SPTY2D1-AS1A0A0U1RR47 76 aa16.5■□□□□ 0.23
HDDC3-206ENST00000561036 A0A1W2PPV9 198 aa16.5■□□□□ 0.23
HDDC3-206ENST00000561036 A6NCN8 305 aa16.5■□□□□ 0.23
HDDC3-206ENST00000561036 METTL12A8MUP2 240 aa16.5■□□□□ 0.23
HDDC3-206ENST00000561036 IL6P05231 212 aa16.5■□□□□ 0.23
HDDC3-206ENST00000561036 ME2P23368 584 aa16.5■□□□□ 0.23
HDDC3-206ENST00000561036 ACTR1BP42025 376 aa16.5■□□□□ 0.23
HDDC3-206ENST00000561036 C21orf58P58505 322 aa16.5■□□□□ 0.23
HDDC3-206ENST00000561036 ACTR1AP61163 376 aa16.5■□□□□ 0.23
HDDC3-206ENST00000561036 ZNF423Q2M1K9 1284 aa16.5■□□□□ 0.23
HDDC3-206ENST00000561036 SPIN4Q56A73 249 aa16.5■□□□□ 0.23
HDDC3-206ENST00000561036 NOXRED1Q6NXP6 359 aa16.5■□□□□ 0.23
HDDC3-206ENST00000561036 TMIGD1Q6UXZ0 262 aa16.5■□□□□ 0.23
HDDC3-206ENST00000561036 SLC22A18ASQ8N1D0 253 aa16.5■□□□□ 0.23
HDDC3-206ENST00000561036 LINC01555Q8NAE3 123 aa16.5■□□□□ 0.23
HDDC3-206ENST00000561036 OR4K1Q8NGD4 311 aa16.5■□□□□ 0.23
HDDC3-206ENST00000561036 OR52E1Q8NGJ3 308 aa16.5■□□□□ 0.23
HDDC3-206ENST00000561036 GPBAR1Q8TDU6 330 aa16.5■□□□□ 0.23
HDDC3-206ENST00000561036 CHTF18Q8WVB6 975 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms