RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 A8MU76 341 aa16.75■□□□□ 0.27
TUBB3-211ENST00000556536 NRP2O60462 931 aa16.75■□□□□ 0.27
TUBB3-211ENST00000556536 PRAMEF4O60810 478 aa16.75■□□□□ 0.27
TUBB3-211ENST00000556536 RASSF9O75901 435 aa16.75■□□□□ 0.27
TUBB3-211ENST00000556536 THRAP10827 490 aa16.75■□□□□ 0.27
TUBB3-211ENST00000556536 CDH1P12830 882 aa16.75■□□□□ 0.27
TUBB3-211ENST00000556536 ST6GAL1P15907 406 aa16.75■□□□□ 0.27
TUBB3-211ENST00000556536 TSPAN8P19075 237 aa16.75■□□□□ 0.27
TUBB3-211ENST00000556536 CDH3P22223 829 aa16.75■□□□□ 0.27
TUBB3-211ENST00000556536 CMPK1P30085 196 aa16.75■□□□□ 0.27
TUBB3-211ENST00000556536 GRIA3P42263 894 aa16.75■□□□□ 0.27
TUBB3-211ENST00000556536 NAGLUP54802 743 aa16.75■□□□□ 0.27
TUBB3-211ENST00000556536 FOXC1Q12948 553 aa16.75■□□□□ 0.27
TUBB3-211ENST00000556536 CDC16Q13042 620 aa16.75■□□□□ 0.27
TUBB3-211ENST00000556536 GPS2Q13227 327 aa16.75■□□□□ 0.27
TUBB3-211ENST00000556536 ZIC1Q15915 447 aa16.75■□□□□ 0.27
TUBB3-211ENST00000556536 PDK4Q16654 411 aa16.75■□□□□ 0.27
TUBB3-211ENST00000556536 HHATQ5VTY9 493 aa16.75■□□□□ 0.27
TUBB3-211ENST00000556536 CACHD1Q5VU97 1274 aa16.75■□□□□ 0.27
TUBB3-211ENST00000556536 PRAMEF9Q5VWM5 478 aa16.75■□□□□ 0.27
TUBB3-211ENST00000556536 LIPMQ5VYY2 423 aa16.75■□□□□ 0.27
TUBB3-211ENST00000556536 RBM44Q6ZP01 1051 aaKnown RBP16.75■□□□□ 0.27
TUBB3-211ENST00000556536 C17orf64Q86WR6 236 aa16.75■□□□□ 0.27
TUBB3-211ENST00000556536 CCNYL1Q8N7R7 359 aa16.75■□□□□ 0.27
TUBB3-211ENST00000556536 NEIL2Q969S2 332 aa16.75■□□□□ 0.27
TUBB3-211ENST00000556536 CCDC74BQ96LY2 380 aa16.75■□□□□ 0.27
TUBB3-211ENST00000556536 TRAPPC9Q96Q05 1148 aa16.75■□□□□ 0.27
TUBB3-211ENST00000556536 CD180Q99467 661 aa16.75■□□□□ 0.27
TUBB3-211ENST00000556536 HAUS8Q9BT25 410 aa16.75■□□□□ 0.27
TUBB3-211ENST00000556536 GATA5Q9BWX5 397 aaPredicted RBP16.75■□□□□ 0.27
TUBB3-211ENST00000556536 MRPS30Q9NP92 439 aaKnown RBP16.75■□□□□ 0.27
TUBB3-211ENST00000556536 WASF3Q9UPY6 502 aa16.75■□□□□ 0.27
TUBB3-211ENST00000556536 DYRK1BQ9Y463 629 aa16.75■□□□□ 0.27
TUBB3-211ENST00000556536 E7EQ34 232 aa16.74■□□□□ 0.27
TUBB3-211ENST00000556536 PPP6CO00743 305 aa16.74■□□□□ 0.27
TUBB3-211ENST00000556536 TRIM13O60858 407 aa16.74■□□□□ 0.27
TUBB3-211ENST00000556536 SUPT7LO94864 414 aa16.74■□□□□ 0.27
TUBB3-211ENST00000556536 CCNDBP1O95273 360 aa16.74■□□□□ 0.27
TUBB3-211ENST00000556536 FGF3P11487 239 aaPredicted RBP16.74■□□□□ 0.27
TUBB3-211ENST00000556536 NR1D1P20393 614 aa16.74■□□□□ 0.27
TUBB3-211ENST00000556536 MAGP20916 626 aa16.74■□□□□ 0.27
TUBB3-211ENST00000556536 CCR10P46092 362 aa16.74■□□□□ 0.27
TUBB3-211ENST00000556536 CDH13P55290 713 aa16.74■□□□□ 0.27
TUBB3-211ENST00000556536 ABATP80404 500 aa16.74■□□□□ 0.27
TUBB3-211ENST00000556536 ZFP36L1Q07352 338 aaKnown RBP16.74■□□□□ 0.27
TUBB3-211ENST00000556536 GTF2H2Q13888 395 aa16.74■□□□□ 0.27
TUBB3-211ENST00000556536 CATSPEREQ5SY80 951 aa16.74■□□□□ 0.27
TUBB3-211ENST00000556536 FCRL6Q6DN72 434 aa16.74■□□□□ 0.27
TUBB3-211ENST00000556536 GTF2H2CQ6P1K8 395 aa16.74■□□□□ 0.27
TUBB3-211ENST00000556536 METTL2BQ6P1Q9 378 aaKnown RBP16.74■□□□□ 0.27
TUBB3-211ENST00000556536 ZCCHC23Q6ZST2 131 aa16.74■□□□□ 0.27
TUBB3-211ENST00000556536 PRSS42Q7Z5A4 293 aa16.74■□□□□ 0.27
TUBB3-211ENST00000556536 NUDCD3Q8IVD9 361 aa16.74■□□□□ 0.27
TUBB3-211ENST00000556536 RCBTB1Q8NDN9 531 aa16.74■□□□□ 0.27
TUBB3-211ENST00000556536 SLC5A11Q8WWX8 675 aa16.74■□□□□ 0.27
TUBB3-211ENST00000556536 DPH7Q9BTV6 452 aa16.74■□□□□ 0.27
TUBB3-211ENST00000556536 GSTO2Q9H4Y5 243 aa16.74■□□□□ 0.27
TUBB3-211ENST00000556536 ZBTB26Q9HCK0 441 aa16.74■□□□□ 0.27
TUBB3-211ENST00000556536 C1GALT1Q9NS00 363 aa16.74■□□□□ 0.27
TUBB3-211ENST00000556536 SEMA5BQ9P283 1151 aa16.74■□□□□ 0.27
TUBB3-211ENST00000556536 ANGPTL3Q9Y5C1 460 aa16.74■□□□□ 0.27
TUBB3-211ENST00000556536 KCNE2Q9Y6J6 123 aa16.74■□□□□ 0.27
TUBB3-211ENST00000556536 RP1P56715 2156 aa16.74■□□□□ 0.27
TUBB3-211ENST00000556536 H7BY64 318 aa16.73■□□□□ 0.27
TUBB3-211ENST00000556536 AGRPO00253 132 aa16.73■□□□□ 0.27
TUBB3-211ENST00000556536 OR7A17O14581 309 aa16.73■□□□□ 0.27
TUBB3-211ENST00000556536 BIRC5O15392 142 aa16.73■□□□□ 0.27
TUBB3-211ENST00000556536 MT-CO3P00414 261 aa16.73■□□□□ 0.27
TUBB3-211ENST00000556536 CDK4P11802 303 aa16.73■□□□□ 0.27
TUBB3-211ENST00000556536 CHN1P15882 459 aa16.73■□□□□ 0.27
TUBB3-211ENST00000556536 EPB42P16452 691 aa16.73■□□□□ 0.27
TUBB3-211ENST00000556536 VARSP26640 1264 aaKnown RBP16.73■□□□□ 0.27
TUBB3-211ENST00000556536 SEPHS1P49903 392 aa16.73■□□□□ 0.27
TUBB3-211ENST00000556536 PHF19Q5T6S3 580 aa16.73■□□□□ 0.27
TUBB3-211ENST00000556536 HES3Q5TGS1 186 aa16.73■□□□□ 0.27
TUBB3-211ENST00000556536 CES4AQ5XG92 561 aa16.73■□□□□ 0.27
TUBB3-211ENST00000556536 FIGLAQ6QHK4 219 aa16.73■□□□□ 0.27
TUBB3-211ENST00000556536 NXPE4Q6UWF7 544 aa16.73■□□□□ 0.27
TUBB3-211ENST00000556536 SLCO4C1Q6ZQN7 724 aa16.73■□□□□ 0.27
TUBB3-211ENST00000556536 ARHGAP22Q7Z5H3 698 aa16.73■□□□□ 0.27
TUBB3-211ENST00000556536 TRPC4APQ8TEL6 797 aa16.73■□□□□ 0.27
TUBB3-211ENST00000556536 KLHL6Q8WZ60 621 aa16.73■□□□□ 0.27
TUBB3-211ENST00000556536 PRAP1Q96NZ9 151 aa16.73■□□□□ 0.27
TUBB3-211ENST00000556536 TMEM121BQ9BXQ6 578 aaPredicted RBP16.73■□□□□ 0.27
TUBB3-211ENST00000556536 NOL11Q9H8H0 719 aaKnown RBP16.73■□□□□ 0.27
TUBB3-211ENST00000556536 IPPKQ9H8X2 491 aa16.73■□□□□ 0.27
TUBB3-211ENST00000556536 SEMA4BQ9NPR2 832 aaPredicted RBP16.73■□□□□ 0.27
TUBB3-211ENST00000556536 GPRC5BQ9NZH0 403 aa16.73■□□□□ 0.27
TUBB3-211ENST00000556536 KLK4Q9Y5K2 254 aa16.73■□□□□ 0.27
TUBB3-211ENST00000556536 A0A1B0GTL3 188 aa16.72■□□□□ 0.27
TUBB3-211ENST00000556536 CLGNO14967 610 aa16.72■□□□□ 0.27
TUBB3-211ENST00000556536 TOX3O15405 576 aaPredicted RBP16.72■□□□□ 0.27
TUBB3-211ENST00000556536 FKBP9O95302 570 aa16.72■□□□□ 0.27
TUBB3-211ENST00000556536 GNAZP19086 355 aa16.72■□□□□ 0.27
TUBB3-211ENST00000556536 ATP1A2P50993 1020 aa16.72■□□□□ 0.27
TUBB3-211ENST00000556536 INHBCP55103 352 aa16.72■□□□□ 0.27
TUBB3-211ENST00000556536 CSNK1G2P78368 415 aa16.72■□□□□ 0.27
TUBB3-211ENST00000556536 MEF2AQ02078 507 aaPredicted RBP16.72■□□□□ 0.27
TUBB3-211ENST00000556536 CLCQ05315 142 aa16.72■□□□□ 0.27
TUBB3-211ENST00000556536 ZNF425Q6IV72 752 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms