RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 TCAF2A6NFQ2 919 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 B9A039 149 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 F8W036 122 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 H3BMM5 538 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 H7C0S8 307 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 NEMP1O14524 444 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 NPHS1O60500 1241 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 CLDN11O75508 207 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 KRT34O76011 436 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 IPO13O94829 963 aaKnown RBP4.96□□□□□ -1.62
TMEM260-210ENST00000556422 PSMG1O95456 288 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 NDST3O95803 873 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 OPN1MWP04001 364 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 FCER2P06734 321 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 OPN1MW2P0DN77 364 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 OPN1MW3P0DN78 364 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 HNRNPLP14866 589 aaKnown RBP eCLIP4.96□□□□□ -1.62
TMEM260-210ENST00000556422 PCSK2P16519 638 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 ZNF37AP17032 561 aaPredicted RBP4.96□□□□□ -1.62
TMEM260-210ENST00000556422 PCGF2P35227 344 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 HTR3AP46098 478 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 SLC11A2P49281 568 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 PRIM2P49643 509 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 STC1P52823 247 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 PLK1P53350 603 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 TRA2BP62995 288 aaKnown RBP4.96□□□□□ -1.62
TMEM260-210ENST00000556422 RAD51Q06609 339 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 DNAL1Q4LDG9 190 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 PIWIL4Q7Z3Z4 852 aaKnown RBP4.96□□□□□ -1.62
TMEM260-210ENST00000556422 OR52N1Q8NH53 320 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 LHFPL5Q8TAF8 219 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 NANPQ8TBE9 248 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 SPPL3Q8TCT6 385 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 GATA6Q92908 595 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 VOPP1Q96AW1 172 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 CYP2S1Q96SQ9 504 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 CCM2Q9BSQ5 444 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 NTMT1Q9BV86 223 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 RNF208Q9H0X6 261 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 GSTO2Q9H4Y5 243 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 IL21Q9HBE4 155 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 TIGARQ9NQ88 270 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 POU2F3Q9UKI9 436 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 RPH3ALQ9UNE2 315 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 MAN2B2Q9Y2E5 1009 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 V9GYQ6 96 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 LINC00587B1AMM8 73 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 CD3EAPO15446 510 aaKnown RBP4.96□□□□□ -1.62
TMEM260-210ENST00000556422 INSIG1O15503 277 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 GMDSO60547 372 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 TSPAN3O60637 253 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 SNAP91O60641 907 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 RPP40O75818 363 aaKnown RBP4.96□□□□□ -1.62
TMEM260-210ENST00000556422 LINC00271P0C7V0 271 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 ZNF806P0C7X5 589 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 IRF1P10914 325 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 COX4I1P13073 169 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 CCL5P13501 91 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 MTHFD2P13995 350 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 CD1DP15813 335 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 AHCYP23526 432 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 VHLP40337 213 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 RECQLP46063 649 aaPredicted RBP4.96□□□□□ -1.62
TMEM260-210ENST00000556422 PITPNBP48739 271 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 CCR9P51686 369 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 HNRNPFP52597 415 aaKnown RBP4.96□□□□□ -1.62
TMEM260-210ENST00000556422 TPTEP56180 551 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 GMFBP60983 142 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 TSTA3Q13630 321 aaPredicted RBP4.96□□□□□ -1.62
TMEM260-210ENST00000556422 FAM83EQ2M2I3 478 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 LINGO4Q6UY18 593 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 RNF111Q6ZNA4 994 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 CHST9Q7L1S5 443 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 NET1Q7Z628 596 aaPredicted RBP4.96□□□□□ -1.62
TMEM260-210ENST00000556422 PELI3Q8N2H9 469 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 TERB1Q8NA31 727 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 MARC2Q969Z3 335 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 ZUFSPQ96AP4 578 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 IFT43Q96FT9 208 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 CCDC120Q96HB5 630 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 CDKN2AIPNLQ96HQ2 116 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 TOX2Q96NM4 488 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 NCKIPSDQ9NZQ3 722 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 CD274Q9NZQ7 290 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 SEPT3Q9UH03 358 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 ZNF229Q9UJW7 825 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 IKZF3Q9UKT9 509 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 OR51B4Q9Y5P0 310 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 A0A1W2PPH5 198 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 A0A1W2PPW3 197 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 LOC390937A0A1W2PQ73 354 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 NPIPA7E9PJI5 369 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 CBX4O00257 560 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 SDHDO14521 159 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 GPR39O43194 453 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 CCNT2O60583 730 aaKnown RBP4.96□□□□□ -1.62
TMEM260-210ENST00000556422 C1RP00736 705 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 STAG3L3P0CL85 134 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 NPIPA8P0DM63 369 aa4.96□□□□□ -1.62
TMEM260-210ENST00000556422 F8A1P23610 371 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms