RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 LMF1Q96S06 567 aa17.94■□□□□ 0.46
CDKN3-209ENST00000556102 PLCD4Q9BRC7 762 aa17.94■□□□□ 0.46
CDKN3-209ENST00000556102 MESP1Q9BRJ9 268 aa17.94■□□□□ 0.46
CDKN3-209ENST00000556102 ZNF160Q9HCG1 818 aa17.94■□□□□ 0.46
CDKN3-209ENST00000556102 MRPS30Q9NP92 439 aaKnown RBP17.94■□□□□ 0.46
CDKN3-209ENST00000556102 FAM114A2Q9NRY5 505 aa17.94■□□□□ 0.46
CDKN3-209ENST00000556102 STOX2Q9P2F5 926 aaPredicted RBP17.94■□□□□ 0.46
CDKN3-209ENST00000556102 CDC14AQ9UNH5 594 aa17.94■□□□□ 0.46
CDKN3-209ENST00000556102 CRYL1Q9Y2S2 319 aa17.94■□□□□ 0.46
CDKN3-209ENST00000556102 TCRBV7S3A2A0A539 114 aa17.93■□□□□ 0.46
CDKN3-209ENST00000556102 H0YGG7 62 aa17.93■□□□□ 0.46
CDKN3-209ENST00000556102 MYO1CO00159 1063 aa17.93■□□□□ 0.46
CDKN3-209ENST00000556102 PRPF4O43172 522 aaKnown RBP eCLIP17.93■□□□□ 0.46
CDKN3-209ENST00000556102 PSIP1O75475 530 aaKnown RBP17.93■□□□□ 0.46
CDKN3-209ENST00000556102 KLHL18O94889 574 aa17.93■□□□□ 0.46
CDKN3-209ENST00000556102 FGGP02679 453 aa17.93■□□□□ 0.46
CDKN3-209ENST00000556102 EDN3P14138 238 aa17.93■□□□□ 0.46
CDKN3-209ENST00000556102 CHRM3P20309 590 aa17.93■□□□□ 0.46
CDKN3-209ENST00000556102 RPA3P35244 121 aaPredicted RBP17.93■□□□□ 0.46
CDKN3-209ENST00000556102 DCTP40126 519 aa17.93■□□□□ 0.46
CDKN3-209ENST00000556102 KCNJ1P48048 391 aa17.93■□□□□ 0.46
CDKN3-209ENST00000556102 ARF3P61204 181 aaPredicted RBP17.93■□□□□ 0.46
CDKN3-209ENST00000556102 ARHGAP19Q14CB8 494 aa17.93■□□□□ 0.46
CDKN3-209ENST00000556102 KLHL38Q2WGJ6 581 aa17.93■□□□□ 0.46
CDKN3-209ENST00000556102 VWA2Q5GFL6 755 aa17.93■□□□□ 0.46
CDKN3-209ENST00000556102 ARMC3Q5W041 872 aa17.93■□□□□ 0.46
CDKN3-209ENST00000556102 ATG9BQ674R7 924 aa17.93■□□□□ 0.46
CDKN3-209ENST00000556102 SUSD1Q6UWL2 747 aa17.93■□□□□ 0.46
CDKN3-209ENST00000556102 LINC00696Q6ZRV3 163 aa17.93■□□□□ 0.46
CDKN3-209ENST00000556102 FAR1Q8WVX9 515 aa17.93■□□□□ 0.46
CDKN3-209ENST00000556102 C8orf44Q96CB5 159 aa17.93■□□□□ 0.46
CDKN3-209ENST00000556102 MVB12AQ96EY5 273 aa17.93■□□□□ 0.46
CDKN3-209ENST00000556102 CELSR2Q9HCU4 2923 aa17.92■□□□□ 0.46
CDKN3-209ENST00000556102 E5RI56 91 aa17.92■□□□□ 0.46
CDKN3-209ENST00000556102 USP1O94782 785 aa17.92■□□□□ 0.46
CDKN3-209ENST00000556102 CATP04040 527 aaKnown RBP17.92■□□□□ 0.46
CDKN3-209ENST00000556102 PKMP14618 531 aaKnown RBP17.92■□□□□ 0.46
CDKN3-209ENST00000556102 PAMP19021 973 aa17.92■□□□□ 0.46
CDKN3-209ENST00000556102 HSD17B2P37059 387 aa17.92■□□□□ 0.46
CDKN3-209ENST00000556102 DSG2Q14126 1118 aa17.92■□□□□ 0.46
CDKN3-209ENST00000556102 ACSBG2Q5FVE4 666 aa17.92■□□□□ 0.46
CDKN3-209ENST00000556102 PAQR7Q86WK9 346 aa17.92■□□□□ 0.46
CDKN3-209ENST00000556102 KBTBD2Q8IY47 623 aa17.92■□□□□ 0.46
CDKN3-209ENST00000556102 C14orf105Q9NVL8 296 aa17.92■□□□□ 0.46
CDKN3-209ENST00000556102 GALPQ9UBC7 116 aa17.92■□□□□ 0.46
CDKN3-209ENST00000556102 RUVBL1Q9Y265 456 aaKnown RBP17.92■□□□□ 0.46
CDKN3-209ENST00000556102 VPS9D1Q9Y2B5 631 aa17.92■□□□□ 0.46
CDKN3-209ENST00000556102 CROCCQ5TZA2 2017 aa17.91■□□□□ 0.46
CDKN3-209ENST00000556102 NSG1A0A0A6YYJ2 146 aa17.91■□□□□ 0.46
CDKN3-209ENST00000556102 IGKV1-8A0A0C4DH67 115 aa17.91■□□□□ 0.46
CDKN3-209ENST00000556102 A0A1W2PQ72 361 aa17.91■□□□□ 0.46
CDKN3-209ENST00000556102 ZNF839A8K0R7 811 aa17.91■□□□□ 0.46
CDKN3-209ENST00000556102 CCNDBP1O95273 360 aa17.91■□□□□ 0.46
CDKN3-209ENST00000556102 COX6A1P12074 109 aa17.91■□□□□ 0.46
CDKN3-209ENST00000556102 FDXRP22570 491 aa17.91■□□□□ 0.46
CDKN3-209ENST00000556102 PNLIPRP1P54315 467 aa17.91■□□□□ 0.46
CDKN3-209ENST00000556102 EMP2P54851 167 aa17.91■□□□□ 0.46
CDKN3-209ENST00000556102 SARNPP82979 210 aaKnown RBP17.91■□□□□ 0.46
CDKN3-209ENST00000556102 TSTA3Q13630 321 aaPredicted RBP17.91■□□□□ 0.46
CDKN3-209ENST00000556102 KCNJ11Q14654 390 aa17.91■□□□□ 0.46
CDKN3-209ENST00000556102 GARNL3Q5VVW2 1013 aa17.91■□□□□ 0.46
CDKN3-209ENST00000556102 ICE2Q659A1 982 aa17.91■□□□□ 0.46
CDKN3-209ENST00000556102 RPUSD3Q6P087 351 aaKnown RBP17.91■□□□□ 0.46
CDKN3-209ENST00000556102 NEK10Q6ZWH5 1172 aa17.91■□□□□ 0.46
CDKN3-209ENST00000556102 CENPUQ71F23 418 aa17.91■□□□□ 0.46
CDKN3-209ENST00000556102 NDUFAF7Q7L592 441 aa17.91■□□□□ 0.46
CDKN3-209ENST00000556102 LAPTM4BQ86VI4 370 aa17.91■□□□□ 0.46
CDKN3-209ENST00000556102 CILP2Q8IUL8 1156 aa17.91■□□□□ 0.46
CDKN3-209ENST00000556102 CSNK1A1LQ8N752 337 aa17.91■□□□□ 0.46
CDKN3-209ENST00000556102 PKP4Q99569 1192 aa17.91■□□□□ 0.46
CDKN3-209ENST00000556102 HOMER3Q9NSC5 361 aa17.91■□□□□ 0.46
CDKN3-209ENST00000556102 INTS10Q9NVR2 710 aaKnown RBP17.91■□□□□ 0.46
CDKN3-209ENST00000556102 UTP6Q9NYH9 597 aaKnown RBP17.91■□□□□ 0.46
CDKN3-209ENST00000556102 TRPC4Q9UBN4 977 aa17.91■□□□□ 0.46
CDKN3-209ENST00000556102 TAC3Q9UHF0 121 aa17.91■□□□□ 0.46
CDKN3-209ENST00000556102 IDSB3KWA1 339 aa17.9■□□□□ 0.46
CDKN3-209ENST00000556102 PRR35P0CG20 571 aa17.9■□□□□ 0.46
CDKN3-209ENST00000556102 CXCR2P25025 360 aa17.9■□□□□ 0.46
CDKN3-209ENST00000556102 SOX11P35716 441 aa17.9■□□□□ 0.46
CDKN3-209ENST00000556102 MAGEA6P43360 314 aa17.9■□□□□ 0.46
CDKN3-209ENST00000556102 PER3P56645 1201 aa17.9■□□□□ 0.46
CDKN3-209ENST00000556102 PRDX1Q06830 199 aaKnown RBP17.9■□□□□ 0.46
CDKN3-209ENST00000556102 HKDC1Q2TB90 917 aa17.9■□□□□ 0.46
CDKN3-209ENST00000556102 TTLL9Q3SXZ7 439 aa17.9■□□□□ 0.46
CDKN3-209ENST00000556102 ZNF425Q6IV72 752 aa17.9■□□□□ 0.46
CDKN3-209ENST00000556102 NEPROQ6NW34 567 aa17.9■□□□□ 0.46
CDKN3-209ENST00000556102 FAM180AQ6UWF9 173 aa17.9■□□□□ 0.46
CDKN3-209ENST00000556102 ZNF662Q6ZS27 426 aa17.9■□□□□ 0.46
CDKN3-209ENST00000556102 CATSPER1Q8NEC5 780 aa17.9■□□□□ 0.46
CDKN3-209ENST00000556102 SLX1AQ9BQ83 275 aa17.9■□□□□ 0.46
CDKN3-209ENST00000556102 TRIM56Q9BRZ2 755 aaKnown RBP17.9■□□□□ 0.46
CDKN3-209ENST00000556102 YIPF2Q9BWQ6 316 aa17.9■□□□□ 0.46
CDKN3-209ENST00000556102 SYNPO2LQ9H987 977 aa17.9■□□□□ 0.46
CDKN3-209ENST00000556102 OSGIN2Q9Y236 505 aa17.9■□□□□ 0.46
CDKN3-209ENST00000556102 CPAMD8Q8IZJ3 1885 aa17.9■□□□□ 0.46
CDKN3-209ENST00000556102 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.89■□□□□ 0.45
CDKN3-209ENST00000556102 IGHV1-45A0A0A0MS14 117 aa17.89■□□□□ 0.45
CDKN3-209ENST00000556102 FFAR3O14843 346 aa17.89■□□□□ 0.45
CDKN3-209ENST00000556102 PCDH17O14917 1159 aa17.89■□□□□ 0.45
CDKN3-209ENST00000556102 GPR42O15529 346 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms