RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 SLC17A6Q9P2U8 582 aa7.21□□□□□ -1.26
LINC00640-201ENST00000554409 DHCR7Q9UBM7 475 aaKnown RBP7.21□□□□□ -1.26
LINC00640-201ENST00000554409 TAC3Q9UHF0 121 aa7.21□□□□□ -1.26
LINC00640-201ENST00000554409 MAN2B2Q9Y2E5 1009 aa7.21□□□□□ -1.26
LINC00640-201ENST00000554409 SNX24Q9Y343 169 aa7.21□□□□□ -1.26
LINC00640-201ENST00000554409 PCSK5Q92824 1860 aa7.21□□□□□ -1.26
LINC00640-201ENST00000554409 HEATR5BQ9P2D3 2071 aa7.21□□□□□ -1.26
LINC00640-201ENST00000554409 ATRXP46100 2492 aa7.21□□□□□ -1.26
LINC00640-201ENST00000554409 MDC1Q14676 2089 aaKnown RBP7.2□□□□□ -1.26
LINC00640-201ENST00000554409 IGKV1-8A0A0C4DH67 115 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 MKRN2OSH3BPM6 223 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 DSCR3O14972 297 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 SUV39H1O43463 412 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 TSPAN12O95859 305 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 SYF2O95926 243 aaKnown RBP7.2□□□□□ -1.26
LINC00640-201ENST00000554409 ALBP02768 609 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 EZRP15311 586 aaKnown RBP7.2□□□□□ -1.26
LINC00640-201ENST00000554409 ITGAXP20702 1163 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 CCND1P24385 295 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 HRH2P25021 359 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 IMPA1P29218 277 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 ABATP80404 500 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 CAV1Q03135 178 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 C2orf54Q08AI8 447 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 MGAT5Q09328 741 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 FAM214AQ32MH5 1076 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 NKAIN1Q4KMZ8 207 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 WASHC2DQ5SRD0 308 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 HP1BP3Q5SSJ5 553 aaPredicted RBP7.2□□□□□ -1.26
LINC00640-201ENST00000554409 HECTD2Q5U5R9 776 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 C1orf189Q5VU69 101 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 FRMPD2BQ6IN97 320 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 TCTN3Q6NUS6 607 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 TTLL10Q6ZVT0 673 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 CYS1Q717R9 158 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 ZC3HC1Q86WB0 502 aaKnown RBP7.2□□□□□ -1.26
LINC00640-201ENST00000554409 PAQR7Q86WK9 346 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 RAB43Q86YS6 212 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 PALM2Q8IXS6 379 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 ZBED8Q8IZ13 594 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 TTC29Q8NA56 475 aaPredicted RBP7.2□□□□□ -1.26
LINC00640-201ENST00000554409 PPFIBP2Q8ND30 876 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 OR2Y1Q8NGV0 311 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 MCOLN3Q8TDD5 553 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 NACC2Q96BF6 587 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 ABHD17AQ96GS6 310 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 PDLIM5Q96HC4 596 aaKnown RBP7.2□□□□□ -1.26
LINC00640-201ENST00000554409 CCDC138Q96M89 665 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 IP6K3Q96PC2 410 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 OLFM1Q99784 485 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 MCMBPQ9BTE3 642 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 ACAT2Q9BWD1 397 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 RAB17Q9H0T7 212 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 DPH5Q9H2P9 285 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 WDR54Q9H977 334 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 PARVBQ9HBI1 364 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 CUTCQ9NTM9 273 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 IRAK4Q9NWZ3 460 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 UTP6Q9NYH9 597 aaKnown RBP7.2□□□□□ -1.26
LINC00640-201ENST00000554409 ZFATQ9P243 1243 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 STOX2Q9P2F5 926 aaPredicted RBP7.2□□□□□ -1.26
LINC00640-201ENST00000554409 IFT80Q9P2H3 777 aaPredicted RBP7.2□□□□□ -1.26
LINC00640-201ENST00000554409 NDOR1Q9UHB4 597 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 GPN3Q9UHW5 284 aaPredicted RBP7.2□□□□□ -1.26
LINC00640-201ENST00000554409 ADAMTS6Q9UKP5 1117 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 PDE10AQ9Y233 779 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 VWA7Q9Y334 891 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 UTP11Q9Y3A2 253 aaKnown RBP7.2□□□□□ -1.26
LINC00640-201ENST00000554409 HEMK1Q9Y5R4 338 aaPredicted RBP7.2□□□□□ -1.26
LINC00640-201ENST00000554409 CCDC88CQ9P219 2028 aa7.2□□□□□ -1.26
LINC00640-201ENST00000554409 SMG1Q96Q15 3661 aaKnown RBP7.19□□□□□ -1.26
LINC00640-201ENST00000554409 LOC105369274A0A096LPK9 316 aa7.19□□□□□ -1.26
LINC00640-201ENST00000554409 LOC102723532A0A0G2JNH3 316 aa7.19□□□□□ -1.26
LINC00640-201ENST00000554409 A0A0J9YVX5 310 aa7.19□□□□□ -1.26
LINC00640-201ENST00000554409 NRP2O60462 931 aa7.19□□□□□ -1.26
LINC00640-201ENST00000554409 CNOT3O75175 753 aaKnown RBP7.19□□□□□ -1.26
LINC00640-201ENST00000554409 CEACAM4O75871 244 aa7.19□□□□□ -1.26
LINC00640-201ENST00000554409 ENO2P09104 434 aaPredicted RBP7.19□□□□□ -1.26
LINC00640-201ENST00000554409 GSTA2P09210 222 aa7.19□□□□□ -1.26
LINC00640-201ENST00000554409 PIM1P11309 404 aaPredicted RBP7.19□□□□□ -1.26
LINC00640-201ENST00000554409 ZNF37AP17032 561 aaPredicted RBP7.19□□□□□ -1.26
LINC00640-201ENST00000554409 VARSP26640 1264 aaKnown RBP7.19□□□□□ -1.26
LINC00640-201ENST00000554409 FOLR3P41439 243 aa7.19□□□□□ -1.26
LINC00640-201ENST00000554409 RRADP55042 308 aa7.19□□□□□ -1.26
LINC00640-201ENST00000554409 AP1S2P56377 157 aa7.19□□□□□ -1.26
LINC00640-201ENST00000554409 VSX2P58304 361 aaPredicted RBP7.19□□□□□ -1.26
LINC00640-201ENST00000554409 IL2P60568 153 aa7.19□□□□□ -1.26
LINC00640-201ENST00000554409 TBPL1P62380 186 aa7.19□□□□□ -1.26
LINC00640-201ENST00000554409 YBX1P67809 324 aaKnown RBP7.19□□□□□ -1.26
LINC00640-201ENST00000554409 MRPS25P82663 173 aaKnown RBP7.19□□□□□ -1.26
LINC00640-201ENST00000554409 NFKB2Q00653 900 aa7.19□□□□□ -1.26
LINC00640-201ENST00000554409 CKAP4Q07065 602 aaKnown RBP7.19□□□□□ -1.26
LINC00640-201ENST00000554409 SSPNQ14714 243 aa7.19□□□□□ -1.26
LINC00640-201ENST00000554409 PHKG1Q16816 387 aa7.19□□□□□ -1.26
LINC00640-201ENST00000554409 PRTGQ2VWP7 1150 aa7.19□□□□□ -1.26
LINC00640-201ENST00000554409 LACTB2Q53H82 288 aaPredicted RBP7.19□□□□□ -1.26
LINC00640-201ENST00000554409 PRAMEF13Q5VWM6 474 aa7.19□□□□□ -1.26
LINC00640-201ENST00000554409 PRMT9Q6P2P2 845 aa7.19□□□□□ -1.26
LINC00640-201ENST00000554409 FBXO42Q6P3S6 717 aa7.19□□□□□ -1.26
LINC00640-201ENST00000554409 MED25Q71SY5 747 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms