RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 ATG16L1Q676U5 607 aa4.79□□□□□ -1.64
ATXN3-218ENST00000553309 THOC7Q6I9Y2 204 aaKnown RBP4.79□□□□□ -1.64
ATXN3-218ENST00000553309 BBS12Q6ZW61 710 aa4.79□□□□□ -1.64
ATXN3-218ENST00000553309 SHFQ7M4L6 423 aa4.79□□□□□ -1.64
ATXN3-218ENST00000553309 PLPPR4Q7Z2D5 763 aa4.79□□□□□ -1.64
ATXN3-218ENST00000553309 IQCA1Q86XH1 822 aa4.79□□□□□ -1.64
ATXN3-218ENST00000553309 CCDC60Q8IWA6 550 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-218ENST00000553309 GJC3Q8NFK1 279 aa4.79□□□□□ -1.64
ATXN3-218ENST00000553309 EXOC6Q8TAG9 804 aa4.79□□□□□ -1.64
ATXN3-218ENST00000553309 ZNF75CPQ92670 426 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-218ENST00000553309 TBC1D31Q96DN5 1066 aa4.79□□□□□ -1.64
ATXN3-218ENST00000553309 WBP1Q96G27 269 aa4.79□□□□□ -1.64
ATXN3-218ENST00000553309 C8orf76Q96K31 380 aa4.79□□□□□ -1.64
ATXN3-218ENST00000553309 ADGRG7Q96K78 797 aa4.79□□□□□ -1.64
ATXN3-218ENST00000553309 LRRC3BQ96PB8 259 aa4.79□□□□□ -1.64
ATXN3-218ENST00000553309 GAD1Q99259 594 aa4.79□□□□□ -1.64
ATXN3-218ENST00000553309 LGMNQ99538 433 aa4.79□□□□□ -1.64
ATXN3-218ENST00000553309 UBXN6Q9BZV1 441 aa4.79□□□□□ -1.64
ATXN3-218ENST00000553309 ABCG4Q9H172 646 aa4.79□□□□□ -1.64
ATXN3-218ENST00000553309 FBRSL1Q9HCM7 1045 aaKnown RBP4.79□□□□□ -1.64
ATXN3-218ENST00000553309 MIOSQ9NXC5 875 aa4.79□□□□□ -1.64
ATXN3-218ENST00000553309 TUBGCP4Q9UGJ1 667 aa4.79□□□□□ -1.64
ATXN3-218ENST00000553309 TBK1Q9UHD2 729 aa4.79□□□□□ -1.64
ATXN3-218ENST00000553309 PILRBQ9UKJ0 227 aa4.79□□□□□ -1.64
ATXN3-218ENST00000553309 GTF3C4Q9UKN8 822 aa4.79□□□□□ -1.64
ATXN3-218ENST00000553309 PAIP2BQ9ULR5 123 aaKnown RBP4.79□□□□□ -1.64
ATXN3-218ENST00000553309 SNX9Q9Y5X1 595 aa4.79□□□□□ -1.64
ATXN3-218ENST00000553309 F8P00451 2351 aa4.79□□□□□ -1.64
ATXN3-218ENST00000553309 ICE1Q9Y2F5 2266 aa4.79□□□□□ -1.64
ATXN3-218ENST00000553309 CABIN1Q9Y6J0 2220 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 COL1A2P08123 1366 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 NAV3Q8IVL0 2385 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 A0A0B4J203 849 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 MAGEA13PA6NCF6 341 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 ANTXRLA6NF34 631 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 M0QX08 132 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 CPLX1O14810 134 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 ZBTB5O15062 677 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 NEMFO60524 1076 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 GJB3O75712 270 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 ZNF432O94892 652 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 CCNE2O96020 404 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 PENKP01210 267 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-218ENST00000553309 SERPINF2P08697 491 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 PCNAP12004 261 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 PGM1P36871 562 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 DMPKQ09013 629 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 DLG1Q12959 904 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 ITGADQ13349 1161 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 DYNC1I2Q13409 638 aaKnown RBP4.78□□□□□ -1.64
ATXN3-218ENST00000553309 DRP2Q13474 957 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 DUOXA1Q1HG43 343 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 CCDC14Q49A88 953 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 STXBP5Q5T5C0 1151 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 IRGCQ6NXR0 463 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 FIP1L1Q6UN15 594 aaKnown RBP4.78□□□□□ -1.64
ATXN3-218ENST00000553309 GPAT4Q86UL3 456 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 HOOK3Q86VS8 718 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 ZC3HC1Q86WB0 502 aaKnown RBP4.78□□□□□ -1.64
ATXN3-218ENST00000553309 CPOQ8IVL8 374 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 CCDC50Q8IVM0 306 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 PARP16Q8N5Y8 322 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 ESX1Q8N693 406 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 KBTBD3Q8NAB2 608 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 TNIP2Q8NFZ5 429 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 LNX1Q8TBB1 728 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-218ENST00000553309 CTNNBL1Q8WYA6 563 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-218ENST00000553309 MTBPQ96DY7 904 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 ZC3HAV1LQ96H79 300 aaKnown RBP4.78□□□□□ -1.64
ATXN3-218ENST00000553309 CABS1Q96KC9 395 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 JPH2Q9BR39 696 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-218ENST00000553309 KAT14Q9H8E8 782 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 ADAM28Q9UKQ2 775 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 TNRC6BQ9UPQ9 1833 aaKnown RBP4.78□□□□□ -1.64
ATXN3-218ENST00000553309 PCNX1Q96RV3 2341 aa4.78□□□□□ -1.64
ATXN3-218ENST00000553309 HELZP42694 1942 aaKnown RBP4.78□□□□□ -1.64
ATXN3-218ENST00000553309 ZFHX3Q15911 3703 aa4.77□□□□□ -1.65
ATXN3-218ENST00000553309 NBASA2RRP1 2371 aa4.77□□□□□ -1.65
ATXN3-218ENST00000553309 ERICH2A1L162 156 aa4.77□□□□□ -1.65
ATXN3-218ENST00000553309 ARL5CA6NH57 179 aa4.77□□□□□ -1.65
ATXN3-218ENST00000553309 C2orf81A6NN90 581 aa4.77□□□□□ -1.65
ATXN3-218ENST00000553309 HSPB2A8KAH6 182 aa4.77□□□□□ -1.65
ATXN3-218ENST00000553309 TEX22C9J3V5 150 aa4.77□□□□□ -1.65
ATXN3-218ENST00000553309 PRRG1O14668 218 aa4.77□□□□□ -1.65
ATXN3-218ENST00000553309 LIN7AO14910 233 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-218ENST00000553309 CYTH3O43739 400 aa4.77□□□□□ -1.65
ATXN3-218ENST00000553309 ZIC3O60481 467 aa4.77□□□□□ -1.65
ATXN3-218ENST00000553309 TADA2AO75478 443 aa4.77□□□□□ -1.65
ATXN3-218ENST00000553309 IGHV4-30-4P0DP06 118 aa4.77□□□□□ -1.65
ATXN3-218ENST00000553309 ELAVL4P26378 380 aaKnown RBP4.77□□□□□ -1.65
ATXN3-218ENST00000553309 CCT6AP40227 531 aaKnown RBP4.77□□□□□ -1.65
ATXN3-218ENST00000553309 GPD2P43304 727 aa4.77□□□□□ -1.65
ATXN3-218ENST00000553309 CCR5P51681 352 aa4.77□□□□□ -1.65
ATXN3-218ENST00000553309 CLDN2P57739 230 aa4.77□□□□□ -1.65
ATXN3-218ENST00000553309 FCHO2Q0JRZ9 810 aa4.77□□□□□ -1.65
ATXN3-218ENST00000553309 MRPL28Q13084 256 aaKnown RBP4.77□□□□□ -1.65
ATXN3-218ENST00000553309 ITGB3BPQ13352 177 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-218ENST00000553309 CUL3Q13618 768 aa4.77□□□□□ -1.65
ATXN3-218ENST00000553309 HSPB2Q16082 182 aa4.77□□□□□ -1.65
ATXN3-218ENST00000553309 ITPRIPL2Q3MIP1 535 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms