RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 YAP1P46937 504 aaKnown RBP17.94■□□□□ 0.46
PRPF40B-208ENST00000548436 GRHL2Q6ISB3 625 aa17.94■□□□□ 0.46
PRPF40B-208ENST00000548436 MSANTD1Q6ZTZ1 278 aa17.94■□□□□ 0.46
PRPF40B-208ENST00000548436 TMEM179BQ7Z7N9 219 aa17.94■□□□□ 0.46
PRPF40B-208ENST00000548436 ATL1Q8WXF7 558 aa17.94■□□□□ 0.46
PRPF40B-208ENST00000548436 NELL1Q92832 810 aa17.94■□□□□ 0.46
PRPF40B-208ENST00000548436 ZNF707Q96C28 371 aaPredicted RBP17.94■□□□□ 0.46
PRPF40B-208ENST00000548436 MAGIXQ9H6Y5 334 aa17.94■□□□□ 0.46
PRPF40B-208ENST00000548436 ETHE1O95571 254 aa17.94■□□□□ 0.46
PRPF40B-208ENST00000548436 SOD1P00441 154 aa17.94■□□□□ 0.46
PRPF40B-208ENST00000548436 HPRP00739 348 aa17.94■□□□□ 0.46
PRPF40B-208ENST00000548436 ASLP04424 464 aa17.94■□□□□ 0.46
PRPF40B-208ENST00000548436 PCSK2P16519 638 aa17.94■□□□□ 0.46
PRPF40B-208ENST00000548436 ZNF33BQ06732 778 aa17.94■□□□□ 0.46
PRPF40B-208ENST00000548436 DUOXA1Q1HG43 343 aa17.94■□□□□ 0.46
PRPF40B-208ENST00000548436 ZNF658BQ4V348 819 aaPredicted RBP17.94■□□□□ 0.46
PRPF40B-208ENST00000548436 TMEM240Q5SV17 173 aa17.94■□□□□ 0.46
PRPF40B-208ENST00000548436 CES5AQ6NT32 575 aa17.94■□□□□ 0.46
PRPF40B-208ENST00000548436 TRIM74Q86UV6 250 aa17.94■□□□□ 0.46
PRPF40B-208ENST00000548436 KLHDC8AQ8IYD2 350 aa17.94■□□□□ 0.46
PRPF40B-208ENST00000548436 NRSN1Q8IZ57 195 aa17.94■□□□□ 0.46
PRPF40B-208ENST00000548436 OR56A3Q8NH54 315 aa17.94■□□□□ 0.46
PRPF40B-208ENST00000548436 NXPE3Q969Y0 559 aa17.94■□□□□ 0.46
PRPF40B-208ENST00000548436 C11orf24Q96F05 449 aaPredicted RBP17.94■□□□□ 0.46
PRPF40B-208ENST00000548436 DTD2Q96FN9 168 aa17.94■□□□□ 0.46
PRPF40B-208ENST00000548436 COQ10AQ96MF6 247 aa17.94■□□□□ 0.46
PRPF40B-208ENST00000548436 OSBPL10Q9BXB5 764 aa17.94■□□□□ 0.46
PRPF40B-208ENST00000548436 NPLQ9BXD5 320 aaPredicted RBP17.94■□□□□ 0.46
PRPF40B-208ENST00000548436 TOR3AQ9H497 397 aa17.94■□□□□ 0.46
PRPF40B-208ENST00000548436 MRPS23Q9Y3D9 190 aaKnown RBP17.94■□□□□ 0.46
PRPF40B-208ENST00000548436 MAGEB17A8MXT2 336 aa17.93■□□□□ 0.46
PRPF40B-208ENST00000548436 PRRT4C9JH25 899 aa17.93■□□□□ 0.46
PRPF40B-208ENST00000548436 H0YIV9 168 aa17.93■□□□□ 0.46
PRPF40B-208ENST00000548436 GNGT2O14610 69 aa17.93■□□□□ 0.46
PRPF40B-208ENST00000548436 FPGTO14772 594 aa17.93■□□□□ 0.46
PRPF40B-208ENST00000548436 YY2O15391 372 aa17.93■□□□□ 0.46
PRPF40B-208ENST00000548436 NOBOXO60393 691 aa17.93■□□□□ 0.46
PRPF40B-208ENST00000548436 SH3BGRLO75368 114 aa17.93■□□□□ 0.46
PRPF40B-208ENST00000548436 TRMUO75648 421 aaKnown RBP17.93■□□□□ 0.46
PRPF40B-208ENST00000548436 ELK4P28324 431 aa17.93■□□□□ 0.46
PRPF40B-208ENST00000548436 HNRNPFP52597 415 aaKnown RBP17.93■□□□□ 0.46
PRPF40B-208ENST00000548436 PPP2R2BQ00005 443 aa17.93■□□□□ 0.46
PRPF40B-208ENST00000548436 CCNYL2Q5T2Q4 361 aa17.93■□□□□ 0.46
PRPF40B-208ENST00000548436 GPR141Q7Z602 305 aa17.93■□□□□ 0.46
PRPF40B-208ENST00000548436 NLRP8Q86W28 1048 aa17.93■□□□□ 0.46
PRPF40B-208ENST00000548436 CELF5Q8N6W0 485 aaKnown RBP17.93■□□□□ 0.46
PRPF40B-208ENST00000548436 PYURFQ96I23 114 aa17.93■□□□□ 0.46
PRPF40B-208ENST00000548436 PANX1Q96RD7 426 aa17.93■□□□□ 0.46
PRPF40B-208ENST00000548436 LIN28AQ9H9Z2 209 aaKnown RBP17.93■□□□□ 0.46
PRPF40B-208ENST00000548436 SGK2Q9HBY8 427 aa17.93■□□□□ 0.46
PRPF40B-208ENST00000548436 LTB4R2Q9NPC1 389 aa17.93■□□□□ 0.46
PRPF40B-208ENST00000548436 CDH23Q9H251 3354 aa17.93■□□□□ 0.46
PRPF40B-208ENST00000548436 K7ESM1 405 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 HLA-EP13747 358 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 IL1RNP18510 177 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 HNF4AP41235 474 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 VIPR2P41587 438 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 TRPC1P48995 793 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 ST8SIA6P61647 398 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 RAE1P78406 368 aaKnown RBP17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 SRSF11Q05519 484 aaKnown RBP17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 PPIGQ13427 754 aaKnown RBP eCLIP17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 DPY19L1Q2PZI1 675 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 ZBED5Q49AG3 693 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 ANKRD26P1Q6NSI1 321 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 CHST15Q7LFX5 561 aaPredicted RBP17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 SVOPLQ8N434 492 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 CDC26Q8NHZ8 85 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 SDCCAG3Q96C92 435 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 MBOAT4Q96T53 435 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 RUVBL1Q9Y265 456 aaKnown RBP17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 BTBD3Q9Y2F9 522 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 CLIC1O00299 241 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 ZNF197O14709 1029 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 B4GAT1O43505 415 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 PRMT3O60678 531 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 COX7A2P14406 83 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 ENGP17813 658 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 CTBSQ01459 385 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 PCDH1Q08174 1060 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 ACSM2AQ08AH3 577 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 VAC14Q08AM6 782 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 ACSM2BQ68CK6 577 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 SPESP1Q6UW49 350 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 SERPINA11Q86U17 422 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 CLECL1Q8IZS7 167 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 ZCCHC7Q8N3Z6 543 aaKnown RBP17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 OR8J2Q8NGG1 315 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 WFIKKN2Q8TEU8 576 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 ARMC5Q96C12 935 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 YTHDF1Q9BYJ9 559 aaKnown RBP17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 IFT80Q9P2H3 777 aaPredicted RBP17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 SLC27A6Q9Y2P4 619 aa17.92■□□□□ 0.46
PRPF40B-208ENST00000548436 A0A1B0GVG6 124 aa17.91■□□□□ 0.46
PRPF40B-208ENST00000548436 LINC01553A4QN01 128 aa17.91■□□□□ 0.46
PRPF40B-208ENST00000548436 EVPLLA8MZ36 301 aa17.91■□□□□ 0.46
PRPF40B-208ENST00000548436 PSMD11O00231 422 aa17.91■□□□□ 0.46
PRPF40B-208ENST00000548436 PLK4O00444 970 aa17.91■□□□□ 0.46
PRPF40B-208ENST00000548436 HOXC11O43248 304 aaPredicted RBP17.91■□□□□ 0.46
PRPF40B-208ENST00000548436 RECQL5O94762 991 aaPredicted RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms