RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	ARHGEF39	Q8N4T4	335 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	FAM45A	Q8TCE6	357 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	MCOLN3	Q8TDD5	553 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	ANKRD7	Q92527	254 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	MVB12A	Q96EY5	273 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	OR2A5	Q96R48	311 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	SPSB2	Q99619	263 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	ACAT2	Q9BWD1	397 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	PHACTR1	Q9C0D0	580 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	PCBD2	Q9H0N5	130 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	PARVB	Q9HBI1	364 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	ACSS2	Q9NR19	701 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	WHRN	Q9P202	907 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	TAC3	Q9UHF0	121 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	NXT1	Q9UKK6	140 aa	Known RBP	12.81	□□□□□ -0.36
POLE-222	ENST00000545015	PDE10A	Q9Y233	779 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	VWA7	Q9Y334	891 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	PTRH2	Q9Y3E5	179 aa	Known RBP	12.81	□□□□□ -0.36
POLE-222	ENST00000545015		A0A0J9YVX5	310 aa		12.8	□□□□□ -0.36
POLE-222	ENST00000545015	HYKK	A2RU49	373 aa		12.8	□□□□□ -0.36
POLE-222	ENST00000545015	VSTM2B	A6NLU5	285 aa		12.8	□□□□□ -0.36
POLE-222	ENST00000545015		H0YGG7	62 aa		12.8	□□□□□ -0.36
POLE-222	ENST00000545015	EIF3H	O15372	352 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
POLE-222	ENST00000545015	NRP2	O60462	931 aa		12.8	□□□□□ -0.36
POLE-222	ENST00000545015	WISP1	O95388	367 aa		12.8	□□□□□ -0.36
POLE-222	ENST00000545015	PDGFA	P04085	211 aa		12.8	□□□□□ -0.36
POLE-222	ENST00000545015	ALAS2	P22557	587 aa		12.8	□□□□□ -0.36
POLE-222	ENST00000545015	CCND1	P24385	295 aa		12.8	□□□□□ -0.36
POLE-222	ENST00000545015	CSRP3	P50461	194 aa		12.8	□□□□□ -0.36
POLE-222	ENST00000545015	IL2	P60568	153 aa		12.8	□□□□□ -0.36
POLE-222	ENST00000545015	ARF3	P61204	181 aa	Predicted RBP	12.8	□□□□□ -0.36
POLE-222	ENST00000545015	ATP1A4	Q13733	1029 aa		12.8	□□□□□ -0.36
POLE-222	ENST00000545015	MUM1	Q2TAK8	710 aa		12.8	□□□□□ -0.36
POLE-222	ENST00000545015	HECTD2	Q5U5R9	776 aa		12.8	□□□□□ -0.36
POLE-222	ENST00000545015	GARNL3	Q5VVW2	1013 aa		12.8	□□□□□ -0.36
POLE-222	ENST00000545015	DUPD1	Q68J44	220 aa		12.8	□□□□□ -0.36
POLE-222	ENST00000545015	ASB18	Q6ZVZ8	466 aa		12.8	□□□□□ -0.36
POLE-222	ENST00000545015	SPNS2	Q8IVW8	549 aa		12.8	□□□□□ -0.36
POLE-222	ENST00000545015	MYO1H	Q8N1T3	1032 aa		12.8	□□□□□ -0.36
POLE-222	ENST00000545015	PPFIBP2	Q8ND30	876 aa		12.8	□□□□□ -0.36
POLE-222	ENST00000545015	FBXO36	Q8NEA4	188 aa		12.8	□□□□□ -0.36
POLE-222	ENST00000545015	CFAP36	Q96G28	342 aa		12.8	□□□□□ -0.36
POLE-222	ENST00000545015	C10orf90	Q96M02	699 aa		12.8	□□□□□ -0.36
POLE-222	ENST00000545015	FER1L6-AS2	Q96M78	137 aa		12.8	□□□□□ -0.36
POLE-222	ENST00000545015	MCMBP	Q9BTE3	642 aa		12.8	□□□□□ -0.36
POLE-222	ENST00000545015	SLC25A23	Q9BV35	468 aa		12.8	□□□□□ -0.36
POLE-222	ENST00000545015	NSMCE4A	Q9NXX6	385 aa		12.8	□□□□□ -0.36
POLE-222	ENST00000545015	STOX2	Q9P2F5	926 aa	Predicted RBP	12.8	□□□□□ -0.36
POLE-222	ENST00000545015	ADAMTS6	Q9UKP5	1117 aa		12.8	□□□□□ -0.36
POLE-222	ENST00000545015	SNX24	Q9Y343	169 aa		12.8	□□□□□ -0.36
POLE-222	ENST00000545015	IGLV3-12	A0A075B6K2	115 aa		12.79	□□□□□ -0.36
POLE-222	ENST00000545015	KCNE1B	A0A087WTH5	132 aa		12.79	□□□□□ -0.36
POLE-222	ENST00000545015	TXNDC9	O14530	226 aa		12.79	□□□□□ -0.36
POLE-222	ENST00000545015	MED26	O95402	600 aa		12.79	□□□□□ -0.36
POLE-222	ENST00000545015	SYF2	O95926	243 aa	Known RBP	12.79	□□□□□ -0.36
POLE-222	ENST00000545015	MMP11	P24347	488 aa		12.79	□□□□□ -0.36
POLE-222	ENST00000545015	CASQ1	P31415	396 aa		12.79	□□□□□ -0.36
POLE-222	ENST00000545015	AP1S2	P56377	157 aa		12.79	□□□□□ -0.36
POLE-222	ENST00000545015	PDIA2	Q13087	525 aa	Known RBP	12.79	□□□□□ -0.36
POLE-222	ENST00000545015	CHAF1B	Q13112	559 aa		12.79	□□□□□ -0.36
POLE-222	ENST00000545015	PDAP1	Q13442	181 aa	Known RBP	12.79	□□□□□ -0.36
POLE-222	ENST00000545015	FASTKD3	Q14CZ7	662 aa	Known RBP	12.79	□□□□□ -0.36
POLE-222	ENST00000545015	NKG7	Q16617	165 aa		12.79	□□□□□ -0.36
POLE-222	ENST00000545015	DCAF10	Q5QP82	559 aa		12.79	□□□□□ -0.36
POLE-222	ENST00000545015	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	12.79	□□□□□ -0.36
POLE-222	ENST00000545015	PPP1R32	Q7Z5V6	425 aa		12.79	□□□□□ -0.36
POLE-222	ENST00000545015	THAP11	Q96EK4	314 aa		12.79	□□□□□ -0.36
POLE-222	ENST00000545015	LINGO1	Q96FE5	620 aa		12.79	□□□□□ -0.36
POLE-222	ENST00000545015	SMAD5	Q99717	465 aa	Known RBP	12.79	□□□□□ -0.36
POLE-222	ENST00000545015	SGPP1	Q9BX95	441 aa		12.79	□□□□□ -0.36
POLE-222	ENST00000545015	TRIM31	Q9BZY9	425 aa		12.79	□□□□□ -0.36
POLE-222	ENST00000545015	EPN3	Q9H201	632 aa		12.79	□□□□□ -0.36
POLE-222	ENST00000545015	SYNPO2L	Q9H987	977 aa		12.79	□□□□□ -0.36
POLE-222	ENST00000545015	PPAN	Q9NQ55	473 aa	Known RBP	12.79	□□□□□ -0.36
POLE-222	ENST00000545015	CCDC177	Q9NQR7	707 aa	Predicted RBP	12.79	□□□□□ -0.36
POLE-222	ENST00000545015	TMEM184C	Q9NVA4	438 aa		12.79	□□□□□ -0.36
POLE-222	ENST00000545015	ZFAT	Q9P243	1243 aa		12.79	□□□□□ -0.36
POLE-222	ENST00000545015	SLC17A6	Q9P2U8	582 aa		12.79	□□□□□ -0.36
POLE-222	ENST00000545015	NOVA2	Q9UNW9	492 aa	Known RBP	12.79	□□□□□ -0.36
POLE-222	ENST00000545015	PCSK5	Q92824	1860 aa		12.78	□□□□□ -0.36
POLE-222	ENST00000545015	PEX12	O00623	359 aa		12.78	□□□□□ -0.36
POLE-222	ENST00000545015	RAD51C	O43502	376 aa		12.78	□□□□□ -0.36
POLE-222	ENST00000545015	KLHL41	O60662	606 aa		12.78	□□□□□ -0.36
POLE-222	ENST00000545015	ENO2	P09104	434 aa	Predicted RBP	12.78	□□□□□ -0.36
POLE-222	ENST00000545015	NR1D1	P20393	614 aa		12.78	□□□□□ -0.36
POLE-222	ENST00000545015	OTX2	P32243	289 aa		12.78	□□□□□ -0.36
POLE-222	ENST00000545015	CCL11	P51671	97 aa		12.78	□□□□□ -0.36
POLE-222	ENST00000545015	PGD	P52209	483 aa		12.78	□□□□□ -0.36
POLE-222	ENST00000545015	TBPL1	P62380	186 aa		12.78	□□□□□ -0.36
POLE-222	ENST00000545015	TLE1	Q04724	770 aa		12.78	□□□□□ -0.36
POLE-222	ENST00000545015	CALCOCO2	Q13137	446 aa		12.78	□□□□□ -0.36
POLE-222	ENST00000545015	FAM53B	Q14153	422 aa		12.78	□□□□□ -0.36
POLE-222	ENST00000545015	SLC9A5	Q14940	896 aa		12.78	□□□□□ -0.36
POLE-222	ENST00000545015	PHKG1	Q16816	387 aa		12.78	□□□□□ -0.36
POLE-222	ENST00000545015	PRAMEF13	Q5VWM6	474 aa		12.78	□□□□□ -0.36
POLE-222	ENST00000545015	AGTRAP	Q6RW13	159 aa		12.78	□□□□□ -0.36
POLE-222	ENST00000545015	LCTL	Q6UWM7	567 aa		12.78	□□□□□ -0.36
POLE-222	ENST00000545015	ZC3HC1	Q86WB0	502 aa	Known RBP	12.78	□□□□□ -0.36
POLE-222	ENST00000545015	PALM2	Q8IXS6	379 aa		12.78	□□□□□ -0.36
POLE-222	ENST00000545015	CSNK1A1L	Q8N752	337 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms