RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 GBP5Q96PP8 586 aa16.51■□□□□ 0.23
PTPRO-209ENST00000543886 C9orf16Q9BUW7 83 aa16.51■□□□□ 0.23
PTPRO-209ENST00000543886 PAIP1Q9H074 479 aaKnown RBP16.51■□□□□ 0.23
PTPRO-209ENST00000543886 RSPH9Q9H1X1 276 aaPredicted RBP16.51■□□□□ 0.23
PTPRO-209ENST00000543886 PCDHB14Q9Y5E9 798 aa16.51■□□□□ 0.23
PTPRO-209ENST00000543886 CEP290O15078 2479 aa16.51■□□□□ 0.23
PTPRO-209ENST00000543886 TRBV5-3A0A0A0MS03 114 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 C7orf72A4D263 438 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 SOCS2O14508 198 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 PRMT3O60678 531 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 KIR3DL1P43629 444 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 GTDC1Q4AE62 458 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 LRIF1Q5T3J3 769 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 AGBL4Q5VU57 503 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 CWF19L1Q69YN2 538 aaKnown RBP16.5■□□□□ 0.23
PTPRO-209ENST00000543886 MED27Q6P2C8 311 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 XKR5Q6UX68 686 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 UNC5DQ6UXZ4 953 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 SLCO4C1Q6ZQN7 724 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 ANKRD46Q86W74 232 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 GALNT15Q8N3T1 639 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 ZNF513Q8N8E2 541 aaPredicted RBP16.5■□□□□ 0.23
PTPRO-209ENST00000543886 OR7G3Q8NG95 312 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 FIG4Q92562 907 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 NELL1Q92832 810 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 METTL2AQ96IZ6 378 aaKnown RBP16.5■□□□□ 0.23
PTPRO-209ENST00000543886 TRMT61BQ9BVS5 477 aaKnown RBP16.5■□□□□ 0.23
PTPRO-209ENST00000543886 IKZF5Q9H5V7 419 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 SERHLQ9NQF3 203 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 UBAP1Q9NZ09 502 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 PRKAB1Q9Y478 270 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 MAGEB17A8MXT2 336 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 AP1G1O43747 822 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 ADH1BP00325 375 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 ACADLP28330 430 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 CCT8P50990 548 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 CDK3Q00526 305 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 ATG9BQ674R7 924 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 CES5AQ6NT32 575 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 GCNT7Q6ZNI0 430 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 FAM83HQ6ZRV2 1179 aaPredicted RBP16.5■□□□□ 0.23
PTPRO-209ENST00000543886 AMZ2Q86W34 360 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 CBR4Q8N4T8 237 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 ZNF548Q8NEK5 533 aaPredicted RBP16.5■□□□□ 0.23
PTPRO-209ENST00000543886 HUS1BQ8NHY5 278 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 CDC26Q8NHZ8 85 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 STARD8Q92502 1023 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 FGF14Q92915 247 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 RNF145Q96MT1 663 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 INPP5KQ9BT40 448 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 TBCDQ9BTW9 1192 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 FAM192AQ9GZU8 254 aa16.5■□□□□ 0.23
PTPRO-209ENST00000543886 ELOVL7A1L3X0 281 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 RFXANKO14593 260 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 LDLRP01130 860 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 LAMP2P13473 410 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 COX7A2P14406 83 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 C5AR1P21730 350 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 SRSF11Q05519 484 aaKnown RBP16.49■□□□□ 0.23
PTPRO-209ENST00000543886 RPA4Q13156 261 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 CAMK2GQ13555 558 aaPredicted RBP16.49■□□□□ 0.23
PTPRO-209ENST00000543886 ATP6AP1Q15904 470 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 FAM98BQ52LJ0 330 aaKnown RBP16.49■□□□□ 0.23
PTPRO-209ENST00000543886 PAGE2BQ5JRK9 111 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 TMTC4Q5T4D3 741 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 OR4F3Q6IEY1 312 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 C11orf96Q7Z7L8 435 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 PDZD3Q86UT5 571 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 HDDC3Q8N4P3 179 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 CPPED1Q9BRF8 314 aaPredicted RBP16.49■□□□□ 0.23
PTPRO-209ENST00000543886 CENPKQ9BS16 269 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 CHID1Q9BWS9 393 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 SGPP1Q9BX95 441 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 GORASP2Q9H8Y8 452 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 CCDC177Q9NQR7 707 aaPredicted RBP16.49■□□□□ 0.23
PTPRO-209ENST00000543886 C8orf4Q9NR00 106 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 SLC6A13Q9NSD5 602 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 ASF1AQ9Y294 204 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 FAM220BPB1ANY3 271 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 GSNP06396 782 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 FAM58BPP0C7Q3 252 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 NPPBP16860 134 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 TAS2R38P59533 333 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 MTAPQ13126 283 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 ENPP2Q13822 863 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 SPIN4Q56A73 249 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 LRRTM4Q86VH4 590 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 EPHX4Q8IUS5 362 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 PHACTR4Q8IZ21 702 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 FAM120BQ96EK7 910 aaKnown RBP16.49■□□□□ 0.23
PTPRO-209ENST00000543886 HHIPQ96QV1 700 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 EFCAB11Q9BUY7 163 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 ZDHHC5Q9C0B5 715 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 OR52A5Q9H2C5 316 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 KAT8Q9H7Z6 458 aaKnown RBP16.49■□□□□ 0.23
PTPRO-209ENST00000543886 OAZ3Q9UMX2 235 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 CROCCQ5TZA2 2017 aa16.49■□□□□ 0.23
PTPRO-209ENST00000543886 RNF103-CHMP3A0A140T963 221 aa16.48■□□□□ 0.23
PTPRO-209ENST00000543886 ARHGAP10A1A4S6 786 aa16.48■□□□□ 0.23
PTPRO-209ENST00000543886 TNFAIP8O95379 198 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms