RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 KLHL20Q9Y2M5 609 aa13.2□□□□□ -0.3
TNFSF13B-206ENST00000542136 SNRNP200O75643 2136 aaKnown RBP13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 LOC101059948A0A1B0GTJ6 334 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 ZNF891A8MT65 544 aaPredicted RBP13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 PHGDHO43175 533 aaKnown RBP13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 RIPK2O43353 540 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 ITGB2P05107 769 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 LTA4HP09960 611 aaKnown RBP13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 FAM153BP0C7A2 387 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 COL6A2P12110 1019 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 LIFP15018 202 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 CD1DP15813 335 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 TCN2P20062 427 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 AGXTP21549 392 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 MSH2P43246 934 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 RHDQ02161 417 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 GPS2Q13227 327 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 EFTUD2Q15029 972 aaKnown RBP eCLIP13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 TGFBIQ15582 683 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 TSNQ15631 228 aaKnown RBP13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 FAM83EQ2M2I3 478 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 ZXDCQ2QGD7 858 aaPredicted RBP13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 FAM153CQ494X1 144 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 MROH9Q5TGP6 573 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 ZNF385CQ66K41 422 aaPredicted RBP13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 SULT1C3Q6IMI6 304 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 C19orf48Q6RUI8 117 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 C17orf64Q86WR6 236 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 GPSM1Q86YR5 675 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 SPNS2Q8IVW8 549 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 PPFIBP2Q8ND30 876 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 LRRN4CLQ8ND94 238 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 RHEBL1Q8TAI7 183 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 CLIP3Q96DZ5 547 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 WBP1Q96G27 269 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 OR2A5Q96R48 311 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 PAFAH2Q99487 392 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 SELENOSQ9BQE4 189 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 DHRS4Q9BTZ2 278 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 CAPS2Q9BXY5 557 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 NLNQ9BYT8 704 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 SPRTNQ9H040 489 aaPredicted RBP13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 CNOT10Q9H9A5 744 aaKnown RBP13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 PPCSQ9HAB8 311 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 CPNE5Q9HCH3 593 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 PCMTD2Q9NV79 361 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 TLK1Q9UKI8 766 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 IKZF3Q9UKT9 509 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 LHX6Q9UPM6 363 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 PCDHGA4Q9Y5G9 962 aa13.19□□□□□ -0.3
TNFSF13B-206ENST00000542136 ITPR1Q14643 2758 aa13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 NPEPPSL1A6NEC2 478 aa13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 KRT37O76014 449 aa13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 IPO13O94829 963 aaKnown RBP13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 SLU7O95391 586 aaKnown RBP13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 ALDOAP04075 364 aaKnown RBP13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 C2P06681 752 aa13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 PIM1P11309 404 aaPredicted RBP13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 TYK2P29597 1187 aa13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 DLSTP36957 453 aa13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 MAGEA12P43365 314 aa13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 SERPINB8P50452 374 aa13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 RPS15AP62244 130 aaKnown RBP13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 RPS15P62841 145 aaKnown RBP13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 CXADRP78310 365 aa13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 DCDP81605 110 aaKnown RBP13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 TSTA3Q13630 321 aaPredicted RBP13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 ACAP2Q15057 778 aa13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 TAF1BQ53T94 588 aaPredicted RBP13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 TEX35Q5T0J7 233 aa13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 GARNL3Q5VVW2 1013 aa13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 ADGRD1Q6QNK2 874 aa13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 MBOAT1Q6ZNC8 495 aa13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 RAPH1Q70E73 1250 aa13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 FRA10AC1Q70Z53 315 aa13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 ISCA2Q86U28 154 aa13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 VASH2Q86V25 355 aa13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 DCAKDQ8WVC6 231 aa13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 RHBDF1Q96CC6 855 aa13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 MTBPQ96DY7 904 aa13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 MED8Q96G25 268 aa13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 CATSPER2Q96P56 530 aa13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 CCDC77Q9BR77 488 aa13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 SLC7A5P2Q9GIP4 190 aa13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 ATG10Q9H0Y0 220 aa13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 SNX15Q9NRS6 342 aa13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 CROTQ9UKG9 612 aa13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 KCNE2Q9Y6J6 123 aa13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 PTPRQQ9UMZ3 2332 aa13.18□□□□□ -0.3
TNFSF13B-206ENST00000542136 CACNA1BQ00975 2339 aa13.17□□□□□ -0.3
TNFSF13B-206ENST00000542136 EXOC1LA0A1B0GW35 172 aa13.17□□□□□ -0.3
TNFSF13B-206ENST00000542136 H7BY64 318 aa13.17□□□□□ -0.3
TNFSF13B-206ENST00000542136 KLHL2O95198 593 aa13.17□□□□□ -0.3
TNFSF13B-206ENST00000542136 GUCA1CO95843 209 aa13.17□□□□□ -0.3
TNFSF13B-206ENST00000542136 SNRPAP09012 282 aaKnown RBP13.17□□□□□ -0.3
TNFSF13B-206ENST00000542136 PTPN4P29074 926 aa13.17□□□□□ -0.3
TNFSF13B-206ENST00000542136 GRK3P35626 688 aa13.17□□□□□ -0.3
TNFSF13B-206ENST00000542136 SLC6A12P48065 614 aa13.17□□□□□ -0.3
TNFSF13B-206ENST00000542136 CCR8P51685 355 aa13.17□□□□□ -0.3
TNFSF13B-206ENST00000542136 YBX1P67809 324 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms