RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 FAM86C1Q9NVL1 165 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 SOHLH2Q9NX45 425 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 VTI1BQ9UEU0 232 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 TFR2Q9UP52 801 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 TMEM5Q9Y2B1 443 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 COQ6Q9Y2Z9 468 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 OR1A2Q9Y585 309 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 PCDHGB7Q9Y5F8 929 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 OAS3Q9Y6K5 1087 aaKnown RBP3.47□□□□□ -1.85
PTPN22-211ENST00000538253 OR5K3A6NET4 321 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 USP27XA6NNY8 438 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 ISM1B1AKI9 464 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 SLCO1B7G3V0H7 640 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 STX16-NPEPL1H3BU86 382 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 COPEO14579 308 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 STX16O14662 325 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 ZNF185O15231 689 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 FFAR2O15552 330 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 USP12O75317 370 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 KRT6AP02538 564 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 KRT6BP04259 564 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 NUDT17P0C025 328 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 CD59P13987 128 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 HSD3B1P14060 373 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 PORP16435 677 aaPredicted RBP3.47□□□□□ -1.85
PTPN22-211ENST00000538253 TMEM11P17152 192 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 IL32P24001 234 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 PSMA4P25789 261 aaKnown RBP3.47□□□□□ -1.85
PTPN22-211ENST00000538253 PTGS2P35354 604 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 KRT6CP48668 564 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 ACADVLP49748 655 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 PCBP4P57723 403 aaKnown RBP3.47□□□□□ -1.85
PTPN22-211ENST00000538253 UBE2IP63279 158 aaKnown RBP3.47□□□□□ -1.85
PTPN22-211ENST00000538253 HSD11B2P80365 405 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 TBL3Q12788 808 aaKnown RBP3.47□□□□□ -1.85
PTPN22-211ENST00000538253 SF3A2Q15428 464 aaKnown RBP3.47□□□□□ -1.85
PTPN22-211ENST00000538253 UAP1Q16222 522 aaPredicted RBP3.47□□□□□ -1.85
PTPN22-211ENST00000538253 DEPDC1Q5TB30 811 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 ATG16L1Q676U5 607 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 ZNF704Q6ZNC4 412 aaPredicted RBP3.47□□□□□ -1.85
PTPN22-211ENST00000538253 UBE2R2Q712K3 238 aaPredicted RBP3.47□□□□□ -1.85
PTPN22-211ENST00000538253 ASCL5Q7RTU5 278 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 APLFQ8IW19 511 aaPredicted RBP3.47□□□□□ -1.85
PTPN22-211ENST00000538253 ZNF248Q8NDW4 579 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 RAB3IL1Q8TBN0 382 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 TM9SF4Q92544 642 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 SGK3Q96BR1 496 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 LRFN5Q96NI6 719 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 PIP5K1AQ99755 562 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 TUBA1CQ9BQE3 449 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 ORAI3Q9BRQ5 295 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 LRRC1Q9BTT6 524 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 NDC1Q9BTX1 674 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 CCDC106Q9BWC9 280 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 GHITMQ9H3K2 345 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 SEMA6CQ9H3T2 930 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 NEK6Q9HC98 313 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 FBXO8Q9NRD0 319 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 DNAJC11Q9NVH1 559 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 C14orf105Q9NVL8 296 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 CD274Q9NZQ7 290 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 ABI3Q9P2A4 366 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 CD84Q9UIB8 345 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 PNMA8BQ9ULN7 279 aaPredicted RBP3.47□□□□□ -1.85
PTPN22-211ENST00000538253 C15orf41Q9Y2V0 281 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 MSRB2Q9Y3D2 182 aa3.47□□□□□ -1.85
PTPN22-211ENST00000538253 ATXN2Q99700 1313 aaKnown RBP3.47□□□□□ -1.85
PTPN22-211ENST00000538253 TCRBV7S2A1N4TA0A589 114 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 C21orf140B9A014 251 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 BIRC5O15392 142 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 CBFA2T3O75081 653 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 VPS4BO75351 444 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 GPC4O75487 556 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 DXOO77932 396 aaKnown RBP3.46□□□□□ -1.86
PTPN22-211ENST00000538253 TMEM63AO94886 807 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 SCGB1D2O95969 90 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 RPLP0P05388 317 aaKnown RBP3.46□□□□□ -1.86
PTPN22-211ENST00000538253 ENO1P06733 434 aaKnown RBP3.46□□□□□ -1.86
PTPN22-211ENST00000538253 RHOXF2BP0C7M4 288 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 SLC35G6P0C7Q6 338 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 PIRTP0C851 137 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 GNAZP19086 355 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 JAK1P23458 1154 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 NMBRP28336 390 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 PRKAR1BP31321 381 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 KRT20P35900 424 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 ATP6V1E1P36543 226 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 TSFMP43897 325 aaKnown RBP3.46□□□□□ -1.86
PTPN22-211ENST00000538253 CDKN1CP49918 316 aaPredicted RBP3.46□□□□□ -1.86
PTPN22-211ENST00000538253 CCR8P51685 355 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 PKNOX1P55347 436 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 RPS15P62841 145 aaKnown RBP3.46□□□□□ -1.86
PTPN22-211ENST00000538253 NFKB2Q00653 900 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 MESP2Q0VG99 397 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 MAD2L1Q13257 205 aaPredicted RBP3.46□□□□□ -1.86
PTPN22-211ENST00000538253 TMEM35AQ53FP2 167 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 ARTNQ5T4W7 220 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 PHF19Q5T6S3 580 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 NDUFAF5Q5TEU4 345 aa3.46□□□□□ -1.86
PTPN22-211ENST00000538253 CACHD1Q5VU97 1274 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms