RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 MIPOL1Q8TD10 442 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 SNX19Q92543 992 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 ELMO1Q92556 727 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 PPWD1Q96BP3 646 aaKnown RBP12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 BIRC7Q96CA5 298 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 CENPNQ96H22 339 aaPredicted RBP12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 TEX37Q96LM6 180 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 TMEM79Q9BSE2 394 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 IL1RL2Q9HB29 575 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 TNPO3Q9Y5L0 923 aaKnown RBP12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 hCG_2014768A0A024R1R8 64 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 TCRBV5S2A0A599 114 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 CCDC154A6NI56 674 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 TRIM64CA6NLI5 447 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 IFRD1O00458 451 aaPredicted RBP12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 DLGAP1O14490 977 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 SOCS2O14508 198 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 GIPC1O14908 333 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 LATO43561 262 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 CKMT2P17540 419 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 FASP25445 335 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 HTR1EP28566 365 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 GSK3BP49841 420 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 POLR2JP52435 117 aaKnown RBP12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 UFM1P61960 85 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 NFYCQ13952 458 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 CAPRIN1Q14444 709 aaKnown RBP12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 ATP6AP1Q15904 470 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 PAGE3Q5JUK9 113 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 C6orf136Q5SQH8 315 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 GCNT7Q6ZNI0 430 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 RNF165Q6ZSG1 346 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 Q6ZSR9 355 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 NLRP8Q86W28 1048 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 MYO1HQ8N1T3 1032 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 TSPAN14Q8NG11 270 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 OR2T11Q8NH01 316 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 GAB3Q8WWW8 586 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 C9orf16Q9BUW7 83 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 TRIM39Q9HCM9 518 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 DDX18Q9NVP1 670 aaKnown RBP12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 MYRFQ9Y2G1 1151 aa12.56□□□□□ -0.4
CDK5RAP3-202ENST00000536708 NCF1BA6NI72 391 aaPredicted RBP12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 NCF1CA8MVU1 366 aaPredicted RBP12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 PFDN1O60925 122 aa12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 ENO2P09104 434 aaPredicted RBP12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 MYCLP1P12525 358 aaPredicted RBP12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 NCF1P14598 390 aaPredicted RBP12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 HNRNPA2B1P22626 353 aaKnown RBP12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 SLC5A2P31639 672 aa12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 CXCL12P48061 93 aa12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 CCT8P50990 548 aa12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 ERVPABLB-1P60509 514 aa12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 YBX1P67809 324 aaKnown RBP12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 EMX2Q04743 252 aa12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 RBBP7Q16576 425 aa12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 AASDHQ4L235 1098 aaPredicted RBP12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 KIAA0895LQ68EN5 471 aa12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 C11orf96Q7Z7L8 435 aa12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 ADAMTSL2Q86TH1 951 aa12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 ZFAND4Q86XD8 727 aa12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 PROSER1Q86XN7 944 aa12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 EPHX4Q8IUS5 362 aa12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 EDAQ92838 391 aa12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 ZCCHC2Q9C0B9 1178 aaKnown RBP12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 ALG2Q9H553 416 aa12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 FGF22Q9HCT0 170 aa12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 TUBA8Q9NY65 449 aaPredicted RBP12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 CD274Q9NZQ7 290 aa12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 EGFL7Q9UHF1 273 aa12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 PTBP2Q9UKA9 531 aaKnown RBP12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 PNMA8BQ9ULN7 279 aaPredicted RBP12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 CEPT1Q9Y6K0 416 aa12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 AK5Q9Y6K8 562 aa12.55□□□□□ -0.4
CDK5RAP3-202ENST00000536708 TRIM64A6NGJ6 449 aa12.54□□□□□ -0.4
CDK5RAP3-202ENST00000536708 AP2A2O94973 939 aa12.54□□□□□ -0.4
CDK5RAP3-202ENST00000536708 OR4F21O95013 312 aa12.54□□□□□ -0.4
CDK5RAP3-202ENST00000536708 FTH1P02794 183 aa12.54□□□□□ -0.4
CDK5RAP3-202ENST00000536708 BCKDHBP21953 392 aa12.54□□□□□ -0.4
CDK5RAP3-202ENST00000536708 MYF6P23409 242 aa12.54□□□□□ -0.4
CDK5RAP3-202ENST00000536708 IL12AP29459 219 aa12.54□□□□□ -0.4
CDK5RAP3-202ENST00000536708 PDHA2P29803 388 aa12.54□□□□□ -0.4
CDK5RAP3-202ENST00000536708 EMP3P54852 163 aa12.54□□□□□ -0.4
CDK5RAP3-202ENST00000536708 LIPEQ05469 1076 aa12.54□□□□□ -0.4
CDK5RAP3-202ENST00000536708 SFSWAPQ12872 951 aaKnown RBP12.54□□□□□ -0.4
CDK5RAP3-202ENST00000536708 DCTN2Q13561 401 aaKnown RBP12.54□□□□□ -0.4
CDK5RAP3-202ENST00000536708 PHKG1Q16816 387 aa12.54□□□□□ -0.4
CDK5RAP3-202ENST00000536708 KCTD21Q4G0X4 260 aa12.54□□□□□ -0.4
CDK5RAP3-202ENST00000536708 ZNF658BQ4V348 819 aaPredicted RBP12.54□□□□□ -0.4
CDK5RAP3-202ENST00000536708 TJAP1Q5JTD0 557 aa12.54□□□□□ -0.4
CDK5RAP3-202ENST00000536708 SBSNQ6UWP8 590 aa12.54□□□□□ -0.4
CDK5RAP3-202ENST00000536708 MBOAT1Q6ZNC8 495 aa12.54□□□□□ -0.4
CDK5RAP3-202ENST00000536708 FAM83HQ6ZRV2 1179 aaPredicted RBP12.54□□□□□ -0.4
CDK5RAP3-202ENST00000536708 GALNT13Q8IUC8 556 aa12.54□□□□□ -0.4
CDK5RAP3-202ENST00000536708 PDPRQ8NCN5 879 aa12.54□□□□□ -0.4
CDK5RAP3-202ENST00000536708 PROKR1Q8TCW9 393 aa12.54□□□□□ -0.4
CDK5RAP3-202ENST00000536708 ADAMTS16Q8TE57 1224 aa12.54□□□□□ -0.4
CDK5RAP3-202ENST00000536708 PDXPQ96GD0 296 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms