RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 PRAMEF14Q5SWL7 426 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.36□□□□□ -1.55
CD44-236ENST00000533222 CCNYL2Q5T2Q4 361 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 LCE4AQ5TA78 99 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 RSBN1Q5VWQ0 802 aaPredicted RBP5.36□□□□□ -1.55
CD44-236ENST00000533222 FAM160B1Q5W0V3 765 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 TYW3Q6IPR3 259 aaKnown RBP5.36□□□□□ -1.55
CD44-236ENST00000533222 ARMC6Q6NXE6 501 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 NOTUMQ6P988 496 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 NAPRTQ6XQN6 538 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 COPS6Q7L5N1 327 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 OVCH2Q7RTZ1 564 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 CLNKQ7Z7G1 428 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 TMEM200AQ86VY9 491 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 CIR1Q86X95 450 aaPredicted RBP5.36□□□□□ -1.55
CD44-236ENST00000533222 FOXP4Q8IVH2 680 aaPredicted RBP5.36□□□□□ -1.55
CD44-236ENST00000533222 ARID3BQ8IVW6 561 aaPredicted RBP5.36□□□□□ -1.55
CD44-236ENST00000533222 TIGD4Q8IY51 512 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 CMTM4Q8IZR5 234 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 EID3Q8N140 333 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 ANKRD35Q8N283 1001 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 SPATA6LQ8N4H0 392 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 SLC15A4Q8N697 577 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 MFSD9Q8NBP5 474 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 OR5M3Q8NGP4 307 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 SLC30A5Q8TAD4 765 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 SETD6Q8TBK2 473 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 ACTRT1Q8TDG2 376 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 HTR3CQ8WXA8 447 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 PROX1Q92786 737 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 HAS1Q92839 578 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 RPL3LQ92901 407 aaKnown RBP5.36□□□□□ -1.55
CD44-236ENST00000533222 KAT5Q92993 513 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 R3HDM4Q96D70 268 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 SH3YL1Q96HL8 342 aaPredicted RBP5.36□□□□□ -1.55
CD44-236ENST00000533222 ELMO2Q96JJ3 720 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 BTN2A3PQ96KV6 586 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 CASD1Q96PB1 797 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 PPP1R2P1Q96PQ5 205 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 PRMT1Q99873 361 aaKnown RBP5.36□□□□□ -1.55
CD44-236ENST00000533222 EIF2AK1Q9BQI3 630 aaKnown RBP5.36□□□□□ -1.55
CD44-236ENST00000533222 PDCD2LQ9BRP1 358 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 PDCD10Q9BUL8 212 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 PTDSS2Q9BVG9 487 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 MND1Q9BWT6 205 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 OSBPL11Q9BXB4 747 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 PITPNM3Q9BZ71 974 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 OSBPL8Q9BZF1 889 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 CCDC90BQ9GZT6 254 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 WWP1Q9H0M0 922 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 SLC26A1Q9H2B4 701 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 RHBGQ9H310 441 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 ASB8Q9H765 288 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 CYP3A43Q9HB55 503 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 SARS2Q9NP81 518 aaKnown RBP5.36□□□□□ -1.55
CD44-236ENST00000533222 ASCL3Q9NQ33 180 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 SETD4Q9NVD3 440 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 PRMT7Q9NVM4 692 aaPredicted RBP5.36□□□□□ -1.55
CD44-236ENST00000533222 ERAP1Q9NZ08 941 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 MPP6Q9NZW5 540 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 DNMT3BQ9UBC3 853 aaKnown RBP5.36□□□□□ -1.55
CD44-236ENST00000533222 HAO1Q9UJM8 370 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 KLHL21Q9UJP4 597 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 NOB1Q9ULX3 412 aaKnown RBP5.36□□□□□ -1.55
CD44-236ENST00000533222 SLC22A14Q9Y267 594 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 SLC9A8Q9Y2E8 581 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 SNX24Q9Y343 169 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 NEU2Q9Y3R4 380 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 PCDHA13Q9Y5I0 950 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 SLC22A7Q9Y694 548 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 ARHGAP23Q9P227 1491 aa5.36□□□□□ -1.55
CD44-236ENST00000533222 MYH8P13535 1937 aa5.35□□□□□ -1.55
CD44-236ENST00000533222 PREX2Q70Z35 1606 aa5.35□□□□□ -1.55
CD44-236ENST00000533222 C1orf167Q5SNV9 1468 aa5.35□□□□□ -1.55
CD44-236ENST00000533222 BCL9LQ86UU0 1499 aa5.35□□□□□ -1.55
CD44-236ENST00000533222 NCAPD2Q15021 1401 aa5.35□□□□□ -1.55
CD44-236ENST00000533222 CNTNAP1P78357 1384 aa5.35□□□□□ -1.55
CD44-236ENST00000533222 ABHD14A-ACY1A0A1B0GW23 586 aa5.35□□□□□ -1.55
CD44-236ENST00000533222 A0A1W2PPC1 479 aa5.35□□□□□ -1.55
CD44-236ENST00000533222 MFSD2BA6NFX1 497 aa5.35□□□□□ -1.55
CD44-236ENST00000533222 RHPN2P1A8MT19 583 aa5.35□□□□□ -1.55
CD44-236ENST00000533222 IQCF5A8MTL0 148 aa5.35□□□□□ -1.55
CD44-236ENST00000533222 NPIPA2E9PIF3 369 aa5.35□□□□□ -1.55
CD44-236ENST00000533222 SLC30A4O14863 429 aa5.35□□□□□ -1.55
CD44-236ENST00000533222 B4GAT1O43505 415 aa5.35□□□□□ -1.55
CD44-236ENST00000533222 FAM189A1O60320 539 aa5.35□□□□□ -1.55
CD44-236ENST00000533222 SMPD2O60906 423 aa5.35□□□□□ -1.55
CD44-236ENST00000533222 PPP6R2O75170 966 aa5.35□□□□□ -1.55
CD44-236ENST00000533222 RFPL1O75677 317 aa5.35□□□□□ -1.55
CD44-236ENST00000533222 SLC22A5O76082 557 aa5.35□□□□□ -1.55
CD44-236ENST00000533222 BCL10O95999 233 aa5.35□□□□□ -1.55
CD44-236ENST00000533222 ERBB2P04626 1255 aa5.35□□□□□ -1.55
CD44-236ENST00000533222 PSKH1P11801 424 aa5.35□□□□□ -1.55
CD44-236ENST00000533222 MYCLP12524 364 aaPredicted RBP5.35□□□□□ -1.55
CD44-236ENST00000533222 ATP1A3P13637 1013 aa5.35□□□□□ -1.55
CD44-236ENST00000533222 PRPS1L1P21108 318 aa5.35□□□□□ -1.55
CD44-236ENST00000533222 FPR1P21462 350 aa5.35□□□□□ -1.55
CD44-236ENST00000533222 CALML3P27482 149 aa5.35□□□□□ -1.55
CD44-236ENST00000533222 GCAP28676 217 aa5.35□□□□□ -1.55
CD44-236ENST00000533222 ALDH4A1P30038 563 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms