RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 PAQR3Q6TCH7 311 aa16.47■□□□□ 0.23
PHRF1-204ENST00000532550 ADCK2Q7Z695 626 aa16.47■□□□□ 0.23
PHRF1-204ENST00000532550 MRGPREQ86SM8 312 aa16.47■□□□□ 0.23
PHRF1-204ENST00000532550 ANKMY2Q8IV38 441 aa16.47■□□□□ 0.23
PHRF1-204ENST00000532550 BBOF1Q8ND07 529 aa16.47■□□□□ 0.23
PHRF1-204ENST00000532550 COL26A1Q96A83 441 aa16.47■□□□□ 0.23
PHRF1-204ENST00000532550 ZNF304Q9HCX3 659 aa16.47■□□□□ 0.23
PHRF1-204ENST00000532550 MLXIPLQ9NP71 852 aa16.47■□□□□ 0.23
PHRF1-204ENST00000532550 VWA7Q9Y334 891 aa16.47■□□□□ 0.23
PHRF1-204ENST00000532550 SNX24Q9Y343 169 aa16.47■□□□□ 0.23
PHRF1-204ENST00000532550 ZNF451Q9Y4E5 1061 aa16.47■□□□□ 0.23
PHRF1-204ENST00000532550 PCDHGB7Q9Y5F8 929 aa16.47■□□□□ 0.23
PHRF1-204ENST00000532550 MDC1Q14676 2089 aaKnown RBP16.47■□□□□ 0.23
PHRF1-204ENST00000532550 H0YGG7 62 aa16.46■□□□□ 0.23
PHRF1-204ENST00000532550 SLC16A5O15375 505 aa16.46■□□□□ 0.23
PHRF1-204ENST00000532550 CEACAM4O75871 244 aa16.46■□□□□ 0.23
PHRF1-204ENST00000532550 HIST1H2AGP0C0S8 130 aaPredicted RBP16.46■□□□□ 0.23
PHRF1-204ENST00000532550 HIST1H2ADP20671 130 aa16.46■□□□□ 0.23
PHRF1-204ENST00000532550 ITGAXP20702 1163 aa16.46■□□□□ 0.23
PHRF1-204ENST00000532550 IMPA1P29218 277 aa16.46■□□□□ 0.23
PHRF1-204ENST00000532550 CASQ1P31415 396 aa16.46■□□□□ 0.23
PHRF1-204ENST00000532550 CDKN2DP55273 166 aa16.46■□□□□ 0.23
PHRF1-204ENST00000532550 IL2P60568 153 aa16.46■□□□□ 0.23
PHRF1-204ENST00000532550 ARF3P61204 181 aaPredicted RBP16.46■□□□□ 0.23
PHRF1-204ENST00000532550 PDIA2Q13087 525 aaKnown RBP16.46■□□□□ 0.23
PHRF1-204ENST00000532550 PDAP1Q13442 181 aaKnown RBP16.46■□□□□ 0.23
PHRF1-204ENST00000532550 NKG7Q16617 165 aa16.46■□□□□ 0.23
PHRF1-204ENST00000532550 MUM1Q2TAK8 710 aa16.46■□□□□ 0.23
PHRF1-204ENST00000532550 STEAP4Q687X5 459 aa16.46■□□□□ 0.23
PHRF1-204ENST00000532550 PRMT9Q6P2P2 845 aa16.46■□□□□ 0.23
PHRF1-204ENST00000532550 MAATS1Q7Z4T9 603 aa16.46■□□□□ 0.23
PHRF1-204ENST00000532550 PAQR7Q86WK9 346 aa16.46■□□□□ 0.23
PHRF1-204ENST00000532550 LRRC56Q8IYG6 542 aaPredicted RBP16.46■□□□□ 0.23
PHRF1-204ENST00000532550 METTL27Q8N6F8 245 aaPredicted RBP16.46■□□□□ 0.23
PHRF1-204ENST00000532550 GPATCH11Q8N954 259 aa16.46■□□□□ 0.23
PHRF1-204ENST00000532550 CLEC1AQ8NC01 280 aa16.46■□□□□ 0.23
PHRF1-204ENST00000532550 FDCSPQ8NFU4 85 aa16.46■□□□□ 0.23
PHRF1-204ENST00000532550 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.46■□□□□ 0.23
PHRF1-204ENST00000532550 RERGQ96A58 199 aaPredicted RBP16.46■□□□□ 0.23
PHRF1-204ENST00000532550 NACC2Q96BF6 587 aa16.46■□□□□ 0.23
PHRF1-204ENST00000532550 CABS1Q96KC9 395 aa16.46■□□□□ 0.23
PHRF1-204ENST00000532550 HIST1H2AHQ96KK5 128 aa16.46■□□□□ 0.23
PHRF1-204ENST00000532550 HIST1H2AJQ99878 128 aa16.46■□□□□ 0.23
PHRF1-204ENST00000532550 H2AFJQ9BTM1 129 aa16.46■□□□□ 0.23
PHRF1-204ENST00000532550 SLC26A1Q9H2B4 701 aa16.46■□□□□ 0.23
PHRF1-204ENST00000532550 WDR54Q9H977 334 aa16.46■□□□□ 0.23
PHRF1-204ENST00000532550 PARVBQ9HBI1 364 aa16.46■□□□□ 0.23
PHRF1-204ENST00000532550 PLAC1Q9HBJ0 212 aa16.46■□□□□ 0.23
PHRF1-204ENST00000532550 P4HTMQ9NXG6 502 aa16.46■□□□□ 0.23
PHRF1-204ENST00000532550 GPR83Q9NYM4 423 aa16.46■□□□□ 0.23
PHRF1-204ENST00000532550 ADAMTS6Q9UKP5 1117 aa16.46■□□□□ 0.23
PHRF1-204ENST00000532550 CORO1CQ9ULV4 474 aaPredicted RBP16.46■□□□□ 0.23
PHRF1-204ENST00000532550 MAU2Q9Y6X3 613 aa16.46■□□□□ 0.23
PHRF1-204ENST00000532550 IGKV1-8A0A0C4DH67 115 aa16.45■□□□□ 0.22
PHRF1-204ENST00000532550 PABPN1LA6NDY0 278 aaKnown RBP16.45■□□□□ 0.22
PHRF1-204ENST00000532550 TXNDC9O14530 226 aa16.45■□□□□ 0.22
PHRF1-204ENST00000532550 UMODP07911 640 aa16.45■□□□□ 0.22
PHRF1-204ENST00000532550 RPL21P46778 160 aaKnown RBP16.45■□□□□ 0.22
PHRF1-204ENST00000532550 FOXL2P58012 376 aa16.45■□□□□ 0.22
PHRF1-204ENST00000532550 RELAQ04206 551 aa16.45■□□□□ 0.22
PHRF1-204ENST00000532550 SP140Q13342 867 aa16.45■□□□□ 0.22
PHRF1-204ENST00000532550 FRG1Q14331 258 aaKnown RBP16.45■□□□□ 0.22
PHRF1-204ENST00000532550 HECTD2Q5U5R9 776 aa16.45■□□□□ 0.22
PHRF1-204ENST00000532550 ZNF425Q6IV72 752 aa16.45■□□□□ 0.22
PHRF1-204ENST00000532550 TRMT10BQ6PF06 316 aaKnown RBP16.45■□□□□ 0.22
PHRF1-204ENST00000532550 FBXO36Q8NEA4 188 aa16.45■□□□□ 0.22
PHRF1-204ENST00000532550 LINGO1Q96FE5 620 aa16.45■□□□□ 0.22
PHRF1-204ENST00000532550 PCBD2Q9H0N5 130 aa16.45■□□□□ 0.22
PHRF1-204ENST00000532550 CCDC177Q9NQR7 707 aaPredicted RBP16.45■□□□□ 0.22
PHRF1-204ENST00000532550 ZFATQ9P243 1243 aa16.45■□□□□ 0.22
PHRF1-204ENST00000532550 STOX2Q9P2F5 926 aaPredicted RBP16.45■□□□□ 0.22
PHRF1-204ENST00000532550 SLC17A6Q9P2U8 582 aa16.45■□□□□ 0.22
PHRF1-204ENST00000532550 CDC23Q9UJX2 597 aa16.45■□□□□ 0.22
PHRF1-204ENST00000532550 NXT1Q9UKK6 140 aaKnown RBP16.45■□□□□ 0.22
PHRF1-204ENST00000532550 CDC14AQ9UNH5 594 aa16.45■□□□□ 0.22
PHRF1-204ENST00000532550 PDE10AQ9Y233 779 aa16.45■□□□□ 0.22
PHRF1-204ENST00000532550 MYO18BQ8IUG5 2567 aa16.45■□□□□ 0.22
PHRF1-204ENST00000532550 TENM4Q6N022 2769 aa16.44■□□□□ 0.22
PHRF1-204ENST00000532550 FAM187AA6NFU0 413 aa16.44■□□□□ 0.22
PHRF1-204ENST00000532550 H7BY64 318 aa16.44■□□□□ 0.22
PHRF1-204ENST00000532550 FANCGO15287 622 aa16.44■□□□□ 0.22
PHRF1-204ENST00000532550 KLHL41O60662 606 aa16.44■□□□□ 0.22
PHRF1-204ENST00000532550 EZRP15311 586 aaKnown RBP16.44■□□□□ 0.22
PHRF1-204ENST00000532550 MMP11P24347 488 aa16.44■□□□□ 0.22
PHRF1-204ENST00000532550 HRH2P25021 359 aa16.44■□□□□ 0.22
PHRF1-204ENST00000532550 EMP3P54852 163 aa16.44■□□□□ 0.22
PHRF1-204ENST00000532550 MRPS25P82663 173 aaKnown RBP16.44■□□□□ 0.22
PHRF1-204ENST00000532550 OCA2Q04671 838 aa16.44■□□□□ 0.22
PHRF1-204ENST00000532550 MGAT5Q09328 741 aa16.44■□□□□ 0.22
PHRF1-204ENST00000532550 CALCOCO2Q13137 446 aa16.44■□□□□ 0.22
PHRF1-204ENST00000532550 PRTGQ2VWP7 1150 aa16.44■□□□□ 0.22
PHRF1-204ENST00000532550 DCAF10Q5QP82 559 aa16.44■□□□□ 0.22
PHRF1-204ENST00000532550 FAM45BPQ6NSW5 357 aa16.44■□□□□ 0.22
PHRF1-204ENST00000532550 COX15Q7KZN9 410 aa16.44■□□□□ 0.22
PHRF1-204ENST00000532550 PPP1R32Q7Z5V6 425 aa16.44■□□□□ 0.22
PHRF1-204ENST00000532550 HPS6Q86YV9 775 aa16.44■□□□□ 0.22
PHRF1-204ENST00000532550 CSNK1A1LQ8N752 337 aa16.44■□□□□ 0.22
PHRF1-204ENST00000532550 SPATA4Q8NEY3 305 aa16.44■□□□□ 0.22
PHRF1-204ENST00000532550 FAM45AQ8TCE6 357 aa16.44■□□□□ 0.22
PHRF1-204ENST00000532550 PRAP1Q96NZ9 151 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms