RNA–Protein interactions for RNA: ENST00000531872.5

NXF1-212, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 390 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-212ENST00000531872 DCUN1D3Q8IWE4 304 aa7.38□□□□□ -1.23
NXF1-212ENST00000531872 ZC3H7AQ8IWR0 971 aaKnown RBP7.38□□□□□ -1.23
NXF1-212ENST00000531872 SLC22A15Q8IZD6 547 aa7.38□□□□□ -1.23
NXF1-212ENST00000531872 ARHGEF39Q8N4T4 335 aa7.38□□□□□ -1.23
NXF1-212ENST00000531872 P3H4Q92791 437 aa7.38□□□□□ -1.23
NXF1-212ENST00000531872 CDKN2AIPNLQ96HQ2 116 aa7.38□□□□□ -1.23
NXF1-212ENST00000531872 UTP23Q9BRU9 249 aaKnown RBP7.38□□□□□ -1.23
NXF1-212ENST00000531872 UCK2Q9BZX2 261 aa7.38□□□□□ -1.23
NXF1-212ENST00000531872 SLC24A3Q9HC58 644 aa7.38□□□□□ -1.23
NXF1-212ENST00000531872 KLHL1Q9NR64 748 aa7.38□□□□□ -1.23
NXF1-212ENST00000531872 NLE1Q9NVX2 485 aaPredicted RBP7.38□□□□□ -1.23
NXF1-212ENST00000531872 ZNF358Q9NW07 568 aa7.38□□□□□ -1.23
NXF1-212ENST00000531872 DDX56Q9NY93 547 aaKnown RBP7.38□□□□□ -1.23
NXF1-212ENST00000531872 RNF6Q9Y252 685 aa7.38□□□□□ -1.23
NXF1-212ENST00000531872 AAR2Q9Y312 384 aaKnown RBP7.38□□□□□ -1.23
NXF1-212ENST00000531872 HRH3Q9Y5N1 445 aa7.38□□□□□ -1.23
NXF1-212ENST00000531872 FN1P02751 2386 aaKnown RBP7.37□□□□□ -1.23
NXF1-212ENST00000531872 OR2A25A4D2G3 310 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 CDK2AP1O14519 115 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 FOXS1O43638 330 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 CTAG2O75638 210 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 NEURL1O76050 574 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 ZWINTO95229 277 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 RPN2P04844 631 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 EIF2S1P05198 315 aaKnown RBP7.37□□□□□ -1.23
NXF1-212ENST00000531872 SP1P08047 785 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 CYC1P08574 325 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 OR56A5P0C7T3 313 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 TMEM253P0C7T8 217 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 C8orf89P0DMQ9 161 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 PSMA3P25788 255 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 PSMB5P28074 263 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 RBL1P28749 1068 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 ADAM8P78325 824 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 ZBED6P86452 979 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 TYRO3Q06418 890 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 FASTKQ14296 549 aaKnown RBP7.37□□□□□ -1.23
NXF1-212ENST00000531872 CEBPEQ15744 281 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 MEP1AQ16819 746 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 ODF2Q5BJF6 829 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 RNFT1Q5M7Z0 435 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 GARNL3Q5VVW2 1013 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 KAZNQ674X7 775 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 FCRLBQ6BAA4 426 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 ITPRIPL1Q6GPH6 555 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 TMEM211Q6ICI0 200 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 SLC25A25Q6KCM7 469 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 UNC5DQ6UXZ4 953 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 CEP128Q6ZU80 1094 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 CPEB2Q7Z5Q1 589 aaKnown RBP7.37□□□□□ -1.23
NXF1-212ENST00000531872 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.37□□□□□ -1.23
NXF1-212ENST00000531872 CRLF3Q8IUI8 442 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 VRK3Q8IV63 474 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 KLHDC8BQ8IXV7 354 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 TAB3Q8N5C8 712 aaPredicted RBP7.37□□□□□ -1.23
NXF1-212ENST00000531872 FAM98AQ8NCA5 519 aaKnown RBP7.37□□□□□ -1.23
NXF1-212ENST00000531872 OR2L3Q8NG85 312 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 OR2A1Q8NGT9 310 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 HMGCLL1Q8TB92 370 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 SLC35G2Q8TBE7 412 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 FAM57AQ8TBR7 257 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 NANOS1Q8WY41 292 aaKnown RBP7.37□□□□□ -1.23
NXF1-212ENST00000531872 MMABQ96EY8 250 aaPredicted RBP7.37□□□□□ -1.23
NXF1-212ENST00000531872 CABS1Q96KC9 395 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 ALPK1Q96QP1 1244 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 MDFIQ99750 246 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 OLFM1Q99784 485 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 MIPEPQ99797 713 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 ZFYVE21Q9BQ24 234 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 YIPF2Q9BWQ6 316 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 RAB11FIP5Q9BXF6 653 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 LIME1Q9H400 295 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 SYNPO2LQ9H987 977 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 KCNJ16Q9NPI9 418 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 LMBRD1Q9NUN5 540 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 ANKRD10Q9NXR5 420 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 DNAJB12Q9NXW2 375 aaKnown RBP7.37□□□□□ -1.23
NXF1-212ENST00000531872 CIDEBQ9UHD4 219 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 FEZ2Q9UHY8 353 aaPredicted RBP7.37□□□□□ -1.23
NXF1-212ENST00000531872 SLC39A10Q9ULF5 831 aa7.37□□□□□ -1.23
NXF1-212ENST00000531872 ANK3Q12955 4377 aaKnown RBP7.37□□□□□ -1.23
NXF1-212ENST00000531872 CSPG4Q6UVK1 2322 aa7.36□□□□□ -1.23
NXF1-212ENST00000531872 hCG_1818297A0A087WSY0 165 aa7.36□□□□□ -1.23
NXF1-212ENST00000531872 IGHV3-20A0A0C4DH32 117 aa7.36□□□□□ -1.23
NXF1-212ENST00000531872 A0A1W2PPV9 198 aa7.36□□□□□ -1.23
NXF1-212ENST00000531872 FAM90A27PA6NNH2 459 aa7.36□□□□□ -1.23
NXF1-212ENST00000531872 H0YGG7 62 aa7.36□□□□□ -1.23
NXF1-212ENST00000531872 PROM1O43490 865 aa7.36□□□□□ -1.23
NXF1-212ENST00000531872 KLK8O60259 260 aa7.36□□□□□ -1.23
NXF1-212ENST00000531872 MAN1A2O60476 641 aa7.36□□□□□ -1.23
NXF1-212ENST00000531872 SEC24DO94855 1032 aaPredicted RBP7.36□□□□□ -1.23
NXF1-212ENST00000531872 SUN1O94901 812 aa7.36□□□□□ -1.23
NXF1-212ENST00000531872 TPOP07202 933 aa7.36□□□□□ -1.23
NXF1-212ENST00000531872 ERVK-10P10266 1014 aa7.36□□□□□ -1.23
NXF1-212ENST00000531872 ZNF24P17028 368 aa7.36□□□□□ -1.23
NXF1-212ENST00000531872 PSMB4P28070 264 aa7.36□□□□□ -1.23
NXF1-212ENST00000531872 CCR7P32248 378 aa7.36□□□□□ -1.23
NXF1-212ENST00000531872 FOXN2P32314 431 aa7.36□□□□□ -1.23
NXF1-212ENST00000531872 PTGER1P34995 402 aa7.36□□□□□ -1.23
NXF1-212ENST00000531872 PTGS2P35354 604 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms