RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 MXD4Q14582 209 aaPredicted RBP1.55□□□□□ -2.16
CD44-212ENST00000524922 ZNF234Q14588 700 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 KRT72Q14CN4 511 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 CTF1Q16619 201 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 CLPPQ16740 277 aaPredicted RBP1.55□□□□□ -2.16
CD44-212ENST00000524922 EDRF1Q3B7T1 1238 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 CEP55Q53EZ4 464 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 XKR4Q5GH76 650 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 FAM78AQ5JUQ0 283 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 EOGTQ5NDL2 527 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 JAKMIP3Q5VZ66 844 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 BRAT1Q6PJG6 821 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 TSSK4Q6SA08 328 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 MOXD1Q6UVY6 613 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 VITQ6UXI7 678 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 CEACAM20Q6UY09 585 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 RAD9BQ6WBX8 426 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 KRBA2Q6ZNG9 492 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 QSOX2Q6ZRP7 698 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 KCTD8Q6ZWB6 473 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 TIPARPQ7Z3E1 657 aaKnown RBP1.55□□□□□ -2.16
CD44-212ENST00000524922 ITIH5Q86UX2 942 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 AACSQ86V21 672 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 ZSCAN30Q86W11 494 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 HPS6Q86YV9 775 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 CHCHD4Q8N4Q1 142 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 MINDY1Q8N5J2 469 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 METTL27Q8N6F8 245 aaPredicted RBP1.55□□□□□ -2.16
CD44-212ENST00000524922 DEFB124Q8NES8 71 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 TSTD1Q8NFU3 115 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 CEP70Q8NHQ1 597 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 TRAPPC12Q8WVT3 735 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 IGSF8Q969P0 613 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 PSMG2Q969U7 264 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 TMEM159Q96B96 161 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 CENPTQ96BT3 561 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 OTUB2Q96DC9 234 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 SENP5Q96HI0 755 aaPredicted RBP1.55□□□□□ -2.16
CD44-212ENST00000524922 ZNF583Q96ND8 569 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 AGAP3Q96P47 875 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 RIT2Q99578 217 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 ASCL2Q99929 193 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 KXD1Q9BQD3 176 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 NAPBQ9H115 298 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 PPP1R3EQ9H7J1 279 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 ERVMER34-1Q9H9K5 563 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 JMJD4Q9H9V9 463 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 MAGEE1Q9HCI5 957 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 ASAH2Q9NR71 780 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 ECHDC1Q9NTX5 307 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 KIAA1456Q9P272 454 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 ORC3Q9UBD5 711 aaPredicted RBP1.55□□□□□ -2.16
CD44-212ENST00000524922 PEMTQ9UBM1 199 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 LSM4Q9Y4Z0 139 aaKnown RBP1.55□□□□□ -2.16
CD44-212ENST00000524922 GOLGA4Q13439 2230 aaKnown RBP1.55□□□□□ -2.16
CD44-212ENST00000524922 SDK1Q7Z5N4 2213 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 VPS13CQ709C8 3753 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 MTCL1Q9Y4B5 1905 aaKnown RBP1.54□□□□□ -2.16
CD44-212ENST00000524922 MYH4Q9Y623 1939 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 C2orf16Q68DN1 1984 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 HIVEP2P31629 2446 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 ZCWPW2A0A1B0GU75 182 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 A0A1B0GUA9 196 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 ARL5CA6NH57 179 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 HEPACAM2A8MVW5 462 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 TEX22C9J3V5 150 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 F5H423 210 aaPredicted RBP1.54□□□□□ -2.16
CD44-212ENST00000524922 TMX2-CTNND1H3BSU7 103 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 LAD1O00515 517 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 PEX12O00623 359 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 SLC9A3R1O14745 358 aaPredicted RBP1.54□□□□□ -2.16
CD44-212ENST00000524922 BCAT2O15382 392 aaPredicted RBP1.54□□□□□ -2.16
CD44-212ENST00000524922 SYNCRIPO60506 623 aaKnown RBP1.54□□□□□ -2.16
CD44-212ENST00000524922 WISP2O76076 250 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 ZFAND5O76080 213 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 LYPLA2O95372 231 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 PRSS1P07477 247 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 WEE2P0C1S8 567 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 PRSS56P0CW18 603 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 ZNF26P17031 533 aaPredicted RBP1.54□□□□□ -2.16
CD44-212ENST00000524922 DDX5P17844 614 aaKnown RBP1.54□□□□□ -2.16
CD44-212ENST00000524922 CAPN3P20807 821 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 CYP3A5P20815 502 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 SP100P23497 879 aaPredicted RBP1.54□□□□□ -2.16
CD44-212ENST00000524922 ACP1P24666 158 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 CCNE1P24864 410 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 ITGA3P26006 1051 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 GDI1P31150 447 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 RPL9P32969 192 aaKnown RBP1.54□□□□□ -2.16
CD44-212ENST00000524922 KIF5BP33176 963 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 PTGER4P35408 488 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 TNFRSF4P43489 277 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 RXRGP48443 463 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 METAP2P50579 478 aaKnown RBP eCLIP1.54□□□□□ -2.16
CD44-212ENST00000524922 CCR5P51681 352 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 YWHAZP63104 245 aaKnown RBP1.54□□□□□ -2.16
CD44-212ENST00000524922 IRX4P78413 519 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 TBL3Q12788 808 aaKnown RBP1.54□□□□□ -2.16
CD44-212ENST00000524922 GAGE5Q13069 117 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 GAGE6Q13070 117 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms