RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 ZNF227Q86WZ6 799 aa8.39□□□□□ -1.07
TRAPPC9-212ENST00000521944 SHISA5Q8N114 240 aa8.39□□□□□ -1.07
TRAPPC9-212ENST00000521944 EID3Q8N140 333 aa8.39□□□□□ -1.07
TRAPPC9-212ENST00000521944 LMNTD1Q8N9Z9 388 aa8.39□□□□□ -1.07
TRAPPC9-212ENST00000521944 MIEF2Q96C03 454 aa8.39□□□□□ -1.07
TRAPPC9-212ENST00000521944 CCM2Q9BSQ5 444 aa8.39□□□□□ -1.07
TRAPPC9-212ENST00000521944 ZNF700Q9H0M5 742 aa8.39□□□□□ -1.07
TRAPPC9-212ENST00000521944 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.39□□□□□ -1.07
TRAPPC9-212ENST00000521944 GNPTGQ9UJJ9 305 aa8.39□□□□□ -1.07
TRAPPC9-212ENST00000521944 EDARQ9UNE0 448 aa8.39□□□□□ -1.07
TRAPPC9-212ENST00000521944 NOTCH1P46531 2555 aa8.38□□□□□ -1.07
TRAPPC9-212ENST00000521944 A8MUI8 341 aa8.38□□□□□ -1.07
TRAPPC9-212ENST00000521944 KCNK1O00180 336 aa8.38□□□□□ -1.07
TRAPPC9-212ENST00000521944 BUD23O43709 281 aaKnown RBP8.38□□□□□ -1.07
TRAPPC9-212ENST00000521944 PROCP04070 461 aa8.38□□□□□ -1.07
TRAPPC9-212ENST00000521944 ARL4AP40617 200 aa8.38□□□□□ -1.07
TRAPPC9-212ENST00000521944 GATA4P43694 442 aa8.38□□□□□ -1.07
TRAPPC9-212ENST00000521944 EMP2P54851 167 aa8.38□□□□□ -1.07
TRAPPC9-212ENST00000521944 POLR2FP61218 127 aaKnown RBP8.38□□□□□ -1.07
TRAPPC9-212ENST00000521944 DCAF7P61962 342 aa8.38□□□□□ -1.07
TRAPPC9-212ENST00000521944 FANCCQ00597 558 aa8.38□□□□□ -1.07
TRAPPC9-212ENST00000521944 DAZAP2Q15038 168 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC9-212ENST00000521944 LONRF2Q1L5Z9 754 aa8.38□□□□□ -1.07
TRAPPC9-212ENST00000521944 NCBP2-AS2Q69YL0 99 aa8.38□□□□□ -1.07
TRAPPC9-212ENST00000521944 HMBOX1Q6NT76 420 aa8.38□□□□□ -1.07
TRAPPC9-212ENST00000521944 KDELC1Q6UW63 502 aa8.38□□□□□ -1.07
TRAPPC9-212ENST00000521944 TMEM205Q6UW68 189 aa8.38□□□□□ -1.07
TRAPPC9-212ENST00000521944 HSPH1Q92598 858 aa8.38□□□□□ -1.07
TRAPPC9-212ENST00000521944 TMEM125Q96AQ2 219 aa8.38□□□□□ -1.07
TRAPPC9-212ENST00000521944 IMP4Q96G21 291 aaKnown RBP8.38□□□□□ -1.07
TRAPPC9-212ENST00000521944 DMRTB1Q96MA1 342 aa8.38□□□□□ -1.07
TRAPPC9-212ENST00000521944 THAP2Q9H0W7 228 aa8.38□□□□□ -1.07
TRAPPC9-212ENST00000521944 MVB12BQ9H7P6 319 aa8.38□□□□□ -1.07
TRAPPC9-212ENST00000521944 ZNF304Q9HCX3 659 aa8.38□□□□□ -1.07
TRAPPC9-212ENST00000521944 RIC8BQ9NVN3 520 aa8.38□□□□□ -1.07
TRAPPC9-212ENST00000521944 SMOXQ9NWM0 555 aa8.38□□□□□ -1.07
TRAPPC9-212ENST00000521944 ZNF282Q9UDV7 671 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC9-212ENST00000521944 FOXD3Q9UJU5 478 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC9-212ENST00000521944 ROS1P08922 2347 aa8.38□□□□□ -1.07
TRAPPC9-212ENST00000521944 IGHV3-20A0A0C4DH32 117 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 A0A0G2JNJ9 132 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 EREGO14944 169 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 KCNAB3O43448 404 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 CTSVO60911 334 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 RNF8O76064 485 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 SP1P08047 785 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 ATP1A3P13637 1013 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 ZNF24P17028 368 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 SERPINB6P35237 376 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 PCK1P35558 622 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 OCA2Q04671 838 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 GRM7Q14831 915 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 PAFAH1B3Q15102 231 aaKnown RBP8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 PCBP2Q15366 365 aaKnown RBP eCLIP8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 IFI16Q16666 785 aaKnown RBP8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 HSP90AA4PQ58FG1 418 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 CMPK2Q5EBM0 449 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 Q5PR19 223 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 YOD1Q5VVQ6 348 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 RTL6Q6ICC9 239 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 MICALCLQ6ZW33 695 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 CRLF3Q8IUI8 442 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 OR5AR1Q8NGP9 310 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 SPATA22Q8NHS9 363 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 FAM71BQ8TC56 605 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 TMEM158Q8WZ71 300 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 TFGQ92734 400 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 Q96MF0 132 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 OLFM1Q99784 485 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 SYT11Q9BT88 431 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 RBCK1Q9BYM8 510 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 LACRTQ9GZZ8 138 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 COG4Q9H9E3 785 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 NLRC4Q9NPP4 1024 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 BEX4Q9NWD9 120 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 IL1RAPL1Q9NZN1 696 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 Q9UFV3 132 aa8.37□□□□□ -1.07
TRAPPC9-212ENST00000521944 USF3Q68DE3 2245 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 LOC105369274A0A096LPK9 316 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 LOC102723532A0A0G2JNH3 316 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 GLYATL1P3A0A0U1RQE8 302 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 HYKKA2RU49 373 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 KLHL33A6NCF5 533 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 NRP2O60462 931 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 UQCRHP07919 91 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 GLI4P10075 376 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 MSH3P20585 1137 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 ACADLP28330 430 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 CD151P48509 253 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 PRLHRP49683 370 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 GBE1Q04446 702 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 SYCP1Q15431 976 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 PPP2R5EQ16537 467 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 BOLA3Q53S33 107 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 WASHC2DQ5SRD0 308 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 SLC25A25Q6KCM7 469 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 TIGD7Q6NT04 549 aaPredicted RBP8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 HOOK3Q86VS8 718 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 OR4N4Q8N0Y3 316 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 AMER3Q8N944 861 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms