RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 SNURFLB1AK76 121 aa4.53□□□□□ -1.68
SKP1-208ENST00000521216 LUC7L3O95232 432 aaKnown RBP4.53□□□□□ -1.68
SKP1-208ENST00000521216 MOCS3O95396 460 aa4.53□□□□□ -1.68
SKP1-208ENST00000521216 TCF4P15884 667 aa4.53□□□□□ -1.68
SKP1-208ENST00000521216 CEBPBP17676 345 aa4.53□□□□□ -1.68
SKP1-208ENST00000521216 SLC6A12P48065 614 aa4.53□□□□□ -1.68
SKP1-208ENST00000521216 PMP22Q01453 160 aa4.53□□□□□ -1.68
SKP1-208ENST00000521216 TFCP2Q12800 502 aa4.53□□□□□ -1.68
SKP1-208ENST00000521216 SGSM1Q2NKQ1 1148 aa4.53□□□□□ -1.68
SKP1-208ENST00000521216 PDLIM3Q53GG5 364 aaPredicted RBP4.53□□□□□ -1.68
SKP1-208ENST00000521216 XKR6Q5GH73 641 aa4.53□□□□□ -1.68
SKP1-208ENST00000521216 C6orf136Q5SQH8 315 aa4.53□□□□□ -1.68
SKP1-208ENST00000521216 IL27RAQ6UWB1 636 aa4.53□□□□□ -1.68
SKP1-208ENST00000521216 DNAJB7Q7Z6W7 309 aaPredicted RBP4.53□□□□□ -1.68
SKP1-208ENST00000521216 LSMEM2Q8N112 164 aa4.53□□□□□ -1.68
SKP1-208ENST00000521216 WDSUB1Q8N9V3 476 aa4.53□□□□□ -1.68
SKP1-208ENST00000521216 METTL21AQ8WXB1 218 aa4.53□□□□□ -1.68
SKP1-208ENST00000521216 C4orf45Q96LM5 186 aa4.53□□□□□ -1.68
SKP1-208ENST00000521216 MTMR12Q9C0I1 747 aa4.53□□□□□ -1.68
SKP1-208ENST00000521216 CHCHD3Q9NX63 227 aaKnown RBP4.53□□□□□ -1.68
SKP1-208ENST00000521216 MSGN1A6NI15 193 aa4.52□□□□□ -1.69
SKP1-208ENST00000521216 SLCO1B7G3V0H7 640 aa4.52□□□□□ -1.69
SKP1-208ENST00000521216 GAS8-AS1O95177 125 aa4.52□□□□□ -1.69
SKP1-208ENST00000521216 SERPING1P05155 500 aa4.52□□□□□ -1.69
SKP1-208ENST00000521216 PRKAR1AP10644 381 aa4.52□□□□□ -1.69
SKP1-208ENST00000521216 SLC2A2P11168 524 aaPredicted RBP4.52□□□□□ -1.69
SKP1-208ENST00000521216 CETN2P41208 172 aa4.52□□□□□ -1.69
SKP1-208ENST00000521216 DNA2P51530 1060 aa4.52□□□□□ -1.69
SKP1-208ENST00000521216 PPARDQ03181 441 aa4.52□□□□□ -1.69
SKP1-208ENST00000521216 E2F5Q15329 346 aa4.52□□□□□ -1.69
SKP1-208ENST00000521216 PTGISQ16647 500 aa4.52□□□□□ -1.69
SKP1-208ENST00000521216 CAVIN1Q6NZI2 390 aaKnown RBP4.52□□□□□ -1.69
SKP1-208ENST00000521216 TRAT1Q6PIZ9 186 aa4.52□□□□□ -1.69
SKP1-208ENST00000521216 BTN2A1Q7KYR7 527 aa4.52□□□□□ -1.69
SKP1-208ENST00000521216 ABI3BPQ7Z7G0 1075 aa4.52□□□□□ -1.69
SKP1-208ENST00000521216 AMIGO1Q86WK6 493 aa4.52□□□□□ -1.69
SKP1-208ENST00000521216 METTL23Q86XA0 190 aa4.52□□□□□ -1.69
SKP1-208ENST00000521216 CCDC63Q8NA47 563 aa4.52□□□□□ -1.69
SKP1-208ENST00000521216 SLC37A3Q8NCC5 494 aa4.52□□□□□ -1.69
SKP1-208ENST00000521216 OR5AP2Q8NGF4 316 aa4.52□□□□□ -1.69
SKP1-208ENST00000521216 SPATA3Q8NHX4 192 aa4.52□□□□□ -1.69
SKP1-208ENST00000521216 EXOC4Q96A65 974 aa4.52□□□□□ -1.69
SKP1-208ENST00000521216 PYCR2Q96C36 320 aa4.52□□□□□ -1.69
SKP1-208ENST00000521216 SPATA17Q96L03 361 aa4.52□□□□□ -1.69
SKP1-208ENST00000521216 MAP3K3Q99759 626 aa4.52□□□□□ -1.69
SKP1-208ENST00000521216 CLEC7AQ9BXN2 247 aa4.52□□□□□ -1.69
SKP1-208ENST00000521216 KLHL8Q9P2G9 620 aaPredicted RBP4.52□□□□□ -1.69
SKP1-208ENST00000521216 MAN1B1Q9UKM7 699 aa4.52□□□□□ -1.69
SKP1-208ENST00000521216 ANGPTL3Q9Y5C1 460 aa4.52□□□□□ -1.69
SKP1-208ENST00000521216 A0A087X002 238 aa4.51□□□□□ -1.69
SKP1-208ENST00000521216 CCL24O00175 119 aa4.51□□□□□ -1.69
SKP1-208ENST00000521216 MAGEC1O60732 1142 aa4.51□□□□□ -1.69
SKP1-208ENST00000521216 GBAP04062 536 aa4.51□□□□□ -1.69
SKP1-208ENST00000521216 GP5P40197 560 aa4.51□□□□□ -1.69
SKP1-208ENST00000521216 RGS7P49802 495 aa4.51□□□□□ -1.69
SKP1-208ENST00000521216 CLDN15P56746 228 aa4.51□□□□□ -1.69
SKP1-208ENST00000521216 MYL7Q01449 175 aa4.51□□□□□ -1.69
SKP1-208ENST00000521216 OPCMLQ14982 345 aa4.51□□□□□ -1.69
SKP1-208ENST00000521216 GPR33Q49SQ1 333 aa4.51□□□□□ -1.69
SKP1-208ENST00000521216 FAM133BQ5BKY9 247 aaKnown RBP4.51□□□□□ -1.69
SKP1-208ENST00000521216 ARMC3Q5W041 872 aa4.51□□□□□ -1.69
SKP1-208ENST00000521216 SLC25A47Q6Q0C1 308 aa4.51□□□□□ -1.69
SKP1-208ENST00000521216 MOXD1Q6UVY6 613 aa4.51□□□□□ -1.69
SKP1-208ENST00000521216 NRARPQ7Z6K4 114 aa4.51□□□□□ -1.69
SKP1-208ENST00000521216 DCLK2Q8N568 766 aa4.51□□□□□ -1.69
SKP1-208ENST00000521216 OR1L3Q8NH93 324 aa4.51□□□□□ -1.69
SKP1-208ENST00000521216 SMAP2Q8WU79 429 aaPredicted RBP4.51□□□□□ -1.69
SKP1-208ENST00000521216 AZIN2Q96A70 460 aa4.51□□□□□ -1.69
SKP1-208ENST00000521216 C10orf90Q96M02 699 aa4.51□□□□□ -1.69
SKP1-208ENST00000521216 NKX3-1Q99801 234 aaPredicted RBP4.51□□□□□ -1.69
SKP1-208ENST00000521216 SYT15Q9BQS2 421 aa4.51□□□□□ -1.69
SKP1-208ENST00000521216 PIGQQ9BRB3 760 aa4.51□□□□□ -1.69
SKP1-208ENST00000521216 DGCR6LQ9BY27 220 aa4.51□□□□□ -1.69
SKP1-208ENST00000521216 THAP2Q9H0W7 228 aa4.51□□□□□ -1.69
SKP1-208ENST00000521216 RIMS4Q9H426 269 aaPredicted RBP4.51□□□□□ -1.69
SKP1-208ENST00000521216 RNF186Q9NXI6 227 aa4.51□□□□□ -1.69
SKP1-208ENST00000521216 PKD2L2Q9NZM6 624 aa4.51□□□□□ -1.69
SKP1-208ENST00000521216 TRAV34A0A0B4J273 112 aa4.5□□□□□ -1.69
SKP1-208ENST00000521216 FAM86B1E9PN63 330 aa4.5□□□□□ -1.69
SKP1-208ENST00000521216 CCDC188H7C350 402 aa4.5□□□□□ -1.69
SKP1-208ENST00000521216 ZNF500O60304 480 aaPredicted RBP4.5□□□□□ -1.69
SKP1-208ENST00000521216 SEC24AO95486 1093 aa4.5□□□□□ -1.69
SKP1-208ENST00000521216 CLDN1O95832 211 aa4.5□□□□□ -1.69
SKP1-208ENST00000521216 FAM86B2P0C5J1 330 aa4.5□□□□□ -1.69
SKP1-208ENST00000521216 EPORP19235 508 aa4.5□□□□□ -1.69
SKP1-208ENST00000521216 PAX9P55771 341 aa4.5□□□□□ -1.69
SKP1-208ENST00000521216 ERVK11-1P61568 191 aa4.5□□□□□ -1.69
SKP1-208ENST00000521216 CCDC6Q16204 474 aa4.5□□□□□ -1.69
SKP1-208ENST00000521216 EXT1Q16394 746 aa4.5□□□□□ -1.69
SKP1-208ENST00000521216 RBBP7Q16576 425 aa4.5□□□□□ -1.69
SKP1-208ENST00000521216 ZNF74Q16587 644 aa4.5□□□□□ -1.69
SKP1-208ENST00000521216 UGCGQ16739 394 aa4.5□□□□□ -1.69
SKP1-208ENST00000521216 C14orf177Q52M58 125 aa4.5□□□□□ -1.69
SKP1-208ENST00000521216 LBHQ53QV2 105 aaPredicted RBP4.5□□□□□ -1.69
SKP1-208ENST00000521216 SPECC1Q5M775 1068 aa4.5□□□□□ -1.69
SKP1-208ENST00000521216 PET117Q6UWS5 81 aa4.5□□□□□ -1.69
SKP1-208ENST00000521216 GSG1LQ6UXU4 331 aa4.5□□□□□ -1.69
SKP1-208ENST00000521216 OR10G8Q8NGN5 311 aa4.5□□□□□ -1.69
SKP1-208ENST00000521216 HEXDCQ8WVB3 486 aa4.5□□□□□ -1.69
SKP1-208ENST00000521216 UBE2Q2Q8WVN8 375 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms