RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 C1GALT1C1LP0DN25 315 aa17.12■□□□□ 0.33
SDC2-205ENST00000520233 MAGP20916 626 aa17.12■□□□□ 0.33
SDC2-205ENST00000520233 BGNP21810 368 aa17.12■□□□□ 0.33
SDC2-205ENST00000520233 GRK2P25098 689 aa17.12■□□□□ 0.33
SDC2-205ENST00000520233 HOXD11P31277 338 aaPredicted RBP17.12■□□□□ 0.33
SDC2-205ENST00000520233 LCP2Q13094 533 aa17.12■□□□□ 0.33
SDC2-205ENST00000520233 E2F2Q14209 437 aa17.12■□□□□ 0.33
SDC2-205ENST00000520233 RSPO4Q2I0M5 234 aaPredicted RBP17.12■□□□□ 0.33
SDC2-205ENST00000520233 CATSPEREQ5SY80 951 aa17.12■□□□□ 0.33
SDC2-205ENST00000520233 CACHD1Q5VU97 1274 aa17.12■□□□□ 0.33
SDC2-205ENST00000520233 NXPE4Q6UWF7 544 aa17.12■□□□□ 0.33
SDC2-205ENST00000520233 SLCO4C1Q6ZQN7 724 aa17.12■□□□□ 0.33
SDC2-205ENST00000520233 SLCO6A1Q86UG4 719 aa17.12■□□□□ 0.33
SDC2-205ENST00000520233 TRPC4APQ8TEL6 797 aa17.12■□□□□ 0.33
SDC2-205ENST00000520233 DYDC1Q8WWB3 177 aa17.12■□□□□ 0.33
SDC2-205ENST00000520233 ATP6V1E2Q96A05 226 aa17.12■□□□□ 0.33
SDC2-205ENST00000520233 WDR34Q96EX3 536 aa17.12■□□□□ 0.33
SDC2-205ENST00000520233 TRAPPC9Q96Q05 1148 aa17.12■□□□□ 0.33
SDC2-205ENST00000520233 DPH7Q9BTV6 452 aa17.12■□□□□ 0.33
SDC2-205ENST00000520233 EHD1Q9H4M9 534 aa17.12■□□□□ 0.33
SDC2-205ENST00000520233 KLHL3Q9UH77 587 aa17.12■□□□□ 0.33
SDC2-205ENST00000520233 EP300Q09472 2414 aaPredicted RBP17.11■□□□□ 0.33
SDC2-205ENST00000520233 IGHV5-10-1A0A0J9YXX1 117 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 SPAARA0A1B0GVQ0 90 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 SLC9B1P1A6NJY1 282 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 TMEM114B3SHH9 223 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 H7BY64 318 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 PRAMEF4O60810 478 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 RASSF9O75901 435 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 OTCP00480 354 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 ANKRD34CP0C6C1 535 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 FTH1P19P0C7X4 201 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 EBLN1P0CF75 366 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 THRAP10827 490 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 PVRP15151 417 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 ST6GAL1P15907 406 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 TSPAN8P19075 237 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 MPSTP25325 297 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 CASP2P42575 452 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 NOVA1P51513 510 aaKnown RBP17.11■□□□□ 0.33
SDC2-205ENST00000520233 CCR8P51685 355 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 CCNG1P51959 295 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 SIM1P81133 766 aaPredicted RBP17.11■□□□□ 0.33
SDC2-205ENST00000520233 INSM1Q01101 510 aaPredicted RBP17.11■□□□□ 0.33
SDC2-205ENST00000520233 IRF8Q02556 426 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 GALNT1Q10472 559 aaPredicted RBP17.11■□□□□ 0.33
SDC2-205ENST00000520233 CHIT1Q13231 466 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 TRA2AQ13595 282 aaKnown RBP eCLIP17.11■□□□□ 0.331e-13■■□□□ 14.1
SDC2-205ENST00000520233 RCN2Q14257 317 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 TBCCQ15814 346 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 RBBP7Q16576 425 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 XKR6Q5GH73 641 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 PRAMEF9Q5VWM5 478 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 ATG9BQ674R7 924 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 ATG16L1Q676U5 607 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 ZNF425Q6IV72 752 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 FIGLAQ6QHK4 219 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 RBM44Q6ZP01 1051 aaKnown RBP17.11■□□□□ 0.33
SDC2-205ENST00000520233 TMPRSS11BQ86T26 416 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 KMT5CQ86Y97 462 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 SLITRK4Q8IW52 837 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 OR4K1Q8NGD4 311 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 PTCD3Q96EY7 689 aaKnown RBP17.11■□□□□ 0.33
SDC2-205ENST00000520233 PRAP1Q96NZ9 151 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 ZNF382Q96SR6 550 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 PLCD4Q9BRC7 762 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 DRC3Q9H069 523 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 MANSC1Q9H8J5 431 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 ACTR8Q9H981 624 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 KLHL20Q9Y2M5 609 aa17.11■□□□□ 0.33
SDC2-205ENST00000520233 IGHV5-51A0A0C4DH38 117 aa17.1■□□□□ 0.33
SDC2-205ENST00000520233 OR2A25A4D2G3 310 aa17.1■□□□□ 0.33
SDC2-205ENST00000520233 PPP6CO00743 305 aa17.1■□□□□ 0.33
SDC2-205ENST00000520233 KLF11O14901 512 aa17.1■□□□□ 0.33
SDC2-205ENST00000520233 UGDHO60701 494 aa17.1■□□□□ 0.33
SDC2-205ENST00000520233 WFS1O76024 890 aa17.1■□□□□ 0.33
SDC2-205ENST00000520233 KCNK5O95279 499 aa17.1■□□□□ 0.33
SDC2-205ENST00000520233 ZBTB11O95625 1053 aaPredicted RBP17.1■□□□□ 0.33
SDC2-205ENST00000520233 VARSP26640 1264 aaKnown RBP17.1■□□□□ 0.33
SDC2-205ENST00000520233 PKNOX1P55347 436 aa17.1■□□□□ 0.33
SDC2-205ENST00000520233 CSNK1G2P78368 415 aa17.1■□□□□ 0.33
SDC2-205ENST00000520233 ZFP36L1Q07352 338 aaKnown RBP17.1■□□□□ 0.33
SDC2-205ENST00000520233 TRAF3Q13114 568 aa17.1■□□□□ 0.33
SDC2-205ENST00000520233 STX3Q13277 289 aa17.1■□□□□ 0.33
SDC2-205ENST00000520233 DOC2AQ14183 400 aa17.1■□□□□ 0.33
SDC2-205ENST00000520233 SNAP47Q5SQN1 464 aa17.1■□□□□ 0.33
SDC2-205ENST00000520233 CDCP2Q5VXM1 449 aa17.1■□□□□ 0.33
SDC2-205ENST00000520233 LIPJQ5W064 366 aa17.1■□□□□ 0.33
SDC2-205ENST00000520233 CES4AQ5XG92 561 aa17.1■□□□□ 0.33
SDC2-205ENST00000520233 FCRL6Q6DN72 434 aa17.1■□□□□ 0.33
SDC2-205ENST00000520233 ARHGAP22Q7Z5H3 698 aa17.1■□□□□ 0.33
SDC2-205ENST00000520233 ADCK2Q7Z695 626 aa17.1■□□□□ 0.33
SDC2-205ENST00000520233 PAQR7Q86WK9 346 aa17.1■□□□□ 0.33
SDC2-205ENST00000520233 FAM129CQ86XR2 697 aa17.1■□□□□ 0.33
SDC2-205ENST00000520233 C19orf47Q8N9M1 422 aaKnown RBP17.1■□□□□ 0.33
SDC2-205ENST00000520233 L3MBTL4Q8NA19 623 aa17.1■□□□□ 0.33
SDC2-205ENST00000520233 OR52B6Q8NGF0 335 aa17.1■□□□□ 0.33
SDC2-205ENST00000520233 CKAP2Q8WWK9 683 aa17.1■□□□□ 0.33
SDC2-205ENST00000520233 KLHL6Q8WZ60 621 aa17.1■□□□□ 0.33
SDC2-205ENST00000520233 ZNF75CPQ92670 426 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms