RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 FAM156AQ8NDB6 213 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 TSTD1Q8NFU3 115 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 BIRC7Q96CA5 298 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 WDR92Q96MX6 357 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 XKR8Q9H6D3 395 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 FBXL21Q9UKT6 434 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 DYRK1BQ9Y463 629 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 SLCO1B1Q9Y6L6 691 aa22.56■■□□□ 1.2
SLIT3-204ENST00000518140 GON4LQ3T8J9 2241 aa22.55■■□□□ 1.2
SLIT3-204ENST00000518140 VCANP13611 3396 aa22.55■■□□□ 1.2
SLIT3-204ENST00000518140 FAM234BA2RU67 622 aa22.55■■□□□ 1.2
SLIT3-204ENST00000518140 AKT2P31751 481 aa22.55■■□□□ 1.2
SLIT3-204ENST00000518140 USP39Q53GS9 565 aaKnown RBP22.55■■□□□ 1.2
SLIT3-204ENST00000518140 Q6ZSR6 202 aa22.55■■□□□ 1.2
SLIT3-204ENST00000518140 SIX5Q8N196 739 aa22.55■■□□□ 1.2
SLIT3-204ENST00000518140 SYNPOQ8N3V7 929 aa22.55■■□□□ 1.2
SLIT3-204ENST00000518140 ZNF740Q8NDX6 193 aa22.55■■□□□ 1.2
SLIT3-204ENST00000518140 SLC5A11Q8WWX8 675 aa22.55■■□□□ 1.2
SLIT3-204ENST00000518140 MAGEB10Q96LZ2 347 aaPredicted RBP22.55■■□□□ 1.2
SLIT3-204ENST00000518140 NDE1Q9NXR1 346 aa22.55■■□□□ 1.2
SLIT3-204ENST00000518140 WSB2Q9NYS7 404 aaPredicted RBP22.55■■□□□ 1.2
SLIT3-204ENST00000518140 ADA2Q9NZK5 511 aa22.55■■□□□ 1.2
SLIT3-204ENST00000518140 SLAMF8Q9P0V8 285 aa22.55■■□□□ 1.2
SLIT3-204ENST00000518140 TBC1D29Q9UFV1 150 aa22.55■■□□□ 1.2
SLIT3-204ENST00000518140 CROTQ9UKG9 612 aa22.55■■□□□ 1.2
SLIT3-204ENST00000518140 SERTM1A2A2V5 107 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 BBIP1A8MTZ0 92 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 MAGEB17A8MXT2 336 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 MAP3K7O43318 606 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 PI15O43692 258 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 APBB3O95704 486 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 RPN2P04844 631 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 C1GALT1C1LP0DN25 315 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 PCNAP12004 261 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 XRCC1P18887 633 aaPredicted RBP22.54■■□□□ 1.2
SLIT3-204ENST00000518140 TACR1P25103 407 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 CTBSQ01459 385 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 CYP2A13Q16696 494 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 SMU1Q2TAY7 513 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 PRAMEF14Q5SWL7 426 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 PRAMEF13Q5VWM6 474 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 KIAA0895LQ68EN5 471 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 TMEM154Q6P9G4 183 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 LINC01555Q8NAE3 123 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 OR13H1Q8NG92 308 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 HUS1BQ8NHY5 278 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 CAMK1GQ96NX5 476 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 TMEM168Q9H0V1 697 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 GMPR2Q9P2T1 348 aaKnown RBP22.54■■□□□ 1.2
SLIT3-204ENST00000518140 CCDC154A6NI56 674 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 CDH1P12830 882 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 PSMB5P28074 263 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 STARD6P59095 220 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 CCNIQ14094 377 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 LRRC32Q14392 662 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 CAPRIN1Q14444 709 aaKnown RBP22.54■■□□□ 1.2
SLIT3-204ENST00000518140 SLBPQ14493 270 aaKnown RBP eCLIP22.54■■□□□ 1.2
SLIT3-204ENST00000518140 UAP1L1Q3KQV9 507 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 NXPE4Q6UWF7 544 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 PCYOX1LQ8NBM8 494 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 SETD7Q8WTS6 366 aaKnown RBP22.54■■□□□ 1.2
SLIT3-204ENST00000518140 CMTM7Q96FZ5 175 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 APOLD1Q96LR9 279 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 TRIM8Q9BZR9 551 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 VCXQ9H320 206 aa22.54■■□□□ 1.2
SLIT3-204ENST00000518140 SPATA6Q9NWH7 488 aaPredicted RBP22.54■■□□□ 1.2
SLIT3-204ENST00000518140 A0A1W2PPV9 198 aa22.53■■□□□ 1.2
SLIT3-204ENST00000518140 FXYD1O00168 92 aa22.53■■□□□ 1.2
SLIT3-204ENST00000518140 AMD1P17707 334 aa22.53■■□□□ 1.2
SLIT3-204ENST00000518140 TCN1P20061 433 aaPredicted RBP22.53■■□□□ 1.2
SLIT3-204ENST00000518140 PRPH2P23942 346 aa22.53■■□□□ 1.2
SLIT3-204ENST00000518140 MS4A2Q01362 244 aa22.53■■□□□ 1.2
SLIT3-204ENST00000518140 ZP2Q05996 745 aa22.53■■□□□ 1.2
SLIT3-204ENST00000518140 MAD2L1Q13257 205 aaPredicted RBP22.53■■□□□ 1.2
SLIT3-204ENST00000518140 RPE65Q16518 533 aa22.53■■□□□ 1.2
SLIT3-204ENST00000518140 ATG9BQ674R7 924 aa22.53■■□□□ 1.2
SLIT3-204ENST00000518140 HACD2Q6Y1H2 254 aa22.53■■□□□ 1.2
SLIT3-204ENST00000518140 HIPK4Q8NE63 616 aa22.53■■□□□ 1.2
SLIT3-204ENST00000518140 TSPEARQ8WU66 669 aa22.53■■□□□ 1.2
SLIT3-204ENST00000518140 WDR34Q96EX3 536 aa22.53■■□□□ 1.2
SLIT3-204ENST00000518140 GPATCH1Q9BRR8 931 aaKnown RBP22.53■■□□□ 1.2
SLIT3-204ENST00000518140 ASIC5Q9NY37 505 aa22.53■■□□□ 1.2
SLIT3-204ENST00000518140 WNT16Q9UBV4 365 aa22.53■■□□□ 1.2
SLIT3-204ENST00000518140 TAC3Q9UHF0 121 aa22.53■■□□□ 1.2
SLIT3-204ENST00000518140 PCDHGA11Q9Y5H2 935 aa22.53■■□□□ 1.2
SLIT3-204ENST00000518140 KCNJ13O60928 360 aa22.53■■□□□ 1.2
SLIT3-204ENST00000518140 JAK1P23458 1154 aa22.53■■□□□ 1.2
SLIT3-204ENST00000518140 HTR1BP28222 390 aa22.53■■□□□ 1.2
SLIT3-204ENST00000518140 ALG11Q2TAA5 492 aa22.53■■□□□ 1.2
SLIT3-204ENST00000518140 CACHD1Q5VU97 1274 aa22.53■■□□□ 1.2
SLIT3-204ENST00000518140 SLC2A7Q6PXP3 512 aa22.53■■□□□ 1.2
SLIT3-204ENST00000518140 ADHFE1Q8IWW8 467 aa22.53■■□□□ 1.2
SLIT3-204ENST00000518140 SLC22A18ASQ8N1D0 253 aa22.53■■□□□ 1.2
SLIT3-204ENST00000518140 EGLN2Q96KS0 407 aa22.53■■□□□ 1.2
SLIT3-204ENST00000518140 HS3ST3A1Q9Y663 406 aa22.53■■□□□ 1.2
SLIT3-204ENST00000518140 USP34Q70CQ2 3546 aa22.52■■□□□ 1.2
SLIT3-204ENST00000518140 CD6P30203 668 aa22.52■■□□□ 1.2
SLIT3-204ENST00000518140 CCR5P51681 352 aa22.52■■□□□ 1.2
SLIT3-204ENST00000518140 ARHGAP19Q14CB8 494 aa22.52■■□□□ 1.2
SLIT3-204ENST00000518140 MED27Q6P2C8 311 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms