RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 DYTNA2CJ06 578 aa17.5■□□□□ 0.39
SPOP-220ENST00000515508 IDSB3KWA1 339 aa17.5■□□□□ 0.39
SPOP-220ENST00000515508 H0YGG7 62 aa17.5■□□□□ 0.39
SPOP-220ENST00000515508 PRPF4O43172 522 aaKnown RBP eCLIP17.5■□□□□ 0.39
SPOP-220ENST00000515508 NDUFS3O75489 264 aa17.5■□□□□ 0.39
SPOP-220ENST00000515508 SERPINA7P05543 415 aa17.5■□□□□ 0.39
SPOP-220ENST00000515508 PRF1P14222 555 aa17.5■□□□□ 0.39
SPOP-220ENST00000515508 ARNTP27540 789 aa17.5■□□□□ 0.39
SPOP-220ENST00000515508 SESN2P58004 480 aaPredicted RBP17.5■□□□□ 0.39
SPOP-220ENST00000515508 ARF3P61204 181 aaPredicted RBP17.5■□□□□ 0.39
SPOP-220ENST00000515508 CRADDP78560 199 aa17.5■□□□□ 0.39
SPOP-220ENST00000515508 TYSND1Q2T9J0 566 aa17.5■□□□□ 0.39
SPOP-220ENST00000515508 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.5■□□□□ 0.39
SPOP-220ENST00000515508 RIPOR1Q6ZS17 1223 aa17.5■□□□□ 0.39
SPOP-220ENST00000515508 BRIX1Q8TDN6 353 aaKnown RBP17.5■□□□□ 0.39
SPOP-220ENST00000515508 NR4A3Q92570 626 aa17.5■□□□□ 0.39
SPOP-220ENST00000515508 HAS2Q92819 552 aa17.5■□□□□ 0.39
SPOP-220ENST00000515508 RELTQ969Z4 430 aa17.5■□□□□ 0.39
SPOP-220ENST00000515508 CABS1Q96KC9 395 aa17.5■□□□□ 0.39
SPOP-220ENST00000515508 PLCD4Q9BRC7 762 aa17.5■□□□□ 0.39
SPOP-220ENST00000515508 DESI2Q9BSY9 194 aa17.5■□□□□ 0.39
SPOP-220ENST00000515508 SYNPO2LQ9H987 977 aa17.5■□□□□ 0.39
SPOP-220ENST00000515508 PTGFRNQ9P2B2 879 aa17.5■□□□□ 0.39
SPOP-220ENST00000515508 STOX2Q9P2F5 926 aaPredicted RBP17.5■□□□□ 0.39
SPOP-220ENST00000515508 CDC14AQ9UNH5 594 aa17.5■□□□□ 0.39
SPOP-220ENST00000515508 RUVBL1Q9Y265 456 aaKnown RBP17.5■□□□□ 0.39
SPOP-220ENST00000515508 TRAV17A0A0B4J275 112 aa17.49■□□□□ 0.39
SPOP-220ENST00000515508 IGKV1-8A0A0C4DH67 115 aa17.49■□□□□ 0.39
SPOP-220ENST00000515508 ARHGAP10A1A4S6 786 aa17.49■□□□□ 0.39
SPOP-220ENST00000515508 VPS26AO75436 327 aa17.49■□□□□ 0.39
SPOP-220ENST00000515508 BMP10O95393 424 aa17.49■□□□□ 0.39
SPOP-220ENST00000515508 NMBRP28336 390 aa17.49■□□□□ 0.39
SPOP-220ENST00000515508 SLC26A3P40879 764 aa17.49■□□□□ 0.39
SPOP-220ENST00000515508 EMP2P54851 167 aa17.49■□□□□ 0.39
SPOP-220ENST00000515508 ADARP55265 1226 aaKnown RBP17.49■□□□□ 0.39
SPOP-220ENST00000515508 SNX1Q13596 522 aa17.49■□□□□ 0.39
SPOP-220ENST00000515508 PAQR7Q86WK9 346 aa17.49■□□□□ 0.39
SPOP-220ENST00000515508 SRRM1Q8IYB3 904 aaKnown RBP17.49■□□□□ 0.39
SPOP-220ENST00000515508 ARHGEF39Q8N4T4 335 aa17.49■□□□□ 0.39
SPOP-220ENST00000515508 AMER3Q8N944 861 aa17.49■□□□□ 0.39
SPOP-220ENST00000515508 LPGAT1Q92604 370 aa17.49■□□□□ 0.39
SPOP-220ENST00000515508 ACAT2Q9BWD1 397 aa17.49■□□□□ 0.39
SPOP-220ENST00000515508 TGIF2Q9GZN2 237 aa17.49■□□□□ 0.39
SPOP-220ENST00000515508 RNF32Q9H0A6 362 aa17.49■□□□□ 0.39
SPOP-220ENST00000515508 MRPS30Q9NP92 439 aaKnown RBP17.49■□□□□ 0.39
SPOP-220ENST00000515508 RIC8BQ9NVN3 520 aa17.49■□□□□ 0.39
SPOP-220ENST00000515508 TRPC4Q9UBN4 977 aa17.49■□□□□ 0.39
SPOP-220ENST00000515508 CSMD2Q7Z408 3487 aa17.49■□□□□ 0.39
SPOP-220ENST00000515508 LOC102723996A0A087X1L8 192 aa17.48■□□□□ 0.39
SPOP-220ENST00000515508 ARHGEF33A8MVX0 844 aa17.48■□□□□ 0.39
SPOP-220ENST00000515508 MYO1CO00159 1063 aa17.48■□□□□ 0.39
SPOP-220ENST00000515508 AP3B1O00203 1094 aa17.48■□□□□ 0.39
SPOP-220ENST00000515508 NIPSNAP2O75323 286 aa17.48■□□□□ 0.39
SPOP-220ENST00000515508 PSIP1O75475 530 aaKnown RBP17.48■□□□□ 0.39
SPOP-220ENST00000515508 ZSCAN5DPP0CG00 497 aa17.48■□□□□ 0.39
SPOP-220ENST00000515508 CXCR2P25025 360 aa17.48■□□□□ 0.39
SPOP-220ENST00000515508 RPL22P35268 128 aaKnown RBP17.48■□□□□ 0.39
SPOP-220ENST00000515508 EEF1A2Q05639 463 aaKnown RBP17.48■□□□□ 0.39
SPOP-220ENST00000515508 ARHGAP19Q14CB8 494 aa17.48■□□□□ 0.39
SPOP-220ENST00000515508 HKDC1Q2TB90 917 aa17.48■□□□□ 0.39
SPOP-220ENST00000515508 RNF187Q5TA31 235 aaPredicted RBP17.48■□□□□ 0.39
SPOP-220ENST00000515508 GARNL3Q5VVW2 1013 aa17.48■□□□□ 0.39
SPOP-220ENST00000515508 ZNF425Q6IV72 752 aa17.48■□□□□ 0.39
SPOP-220ENST00000515508 MRNIPQ6NTE8 343 aa17.48■□□□□ 0.39
SPOP-220ENST00000515508 RNF10Q8N5U6 811 aaKnown RBP17.48■□□□□ 0.39
SPOP-220ENST00000515508 SIRT6Q8N6T7 355 aa17.48■□□□□ 0.39
SPOP-220ENST00000515508 CSNK1A1LQ8N752 337 aa17.48■□□□□ 0.39
SPOP-220ENST00000515508 OR9A1PQ8NGU1 263 aa17.48■□□□□ 0.39
SPOP-220ENST00000515508 SMPDL3AQ92484 453 aa17.48■□□□□ 0.39
SPOP-220ENST00000515508 MAGEB10Q96LZ2 347 aaPredicted RBP17.48■□□□□ 0.39
SPOP-220ENST00000515508 OR2A5Q96R48 311 aa17.48■□□□□ 0.39
SPOP-220ENST00000515508 KIFC1Q9BW19 673 aa17.48■□□□□ 0.39
SPOP-220ENST00000515508 MKKSQ9NPJ1 570 aaPredicted RBP17.48■□□□□ 0.39
SPOP-220ENST00000515508 PLA2G3Q9NZ20 509 aa17.48■□□□□ 0.39
SPOP-220ENST00000515508 COPG2Q9UBF2 871 aa17.48■□□□□ 0.39
SPOP-220ENST00000515508 PDZD2O15018 2839 aa17.48■□□□□ 0.39
SPOP-220ENST00000515508 PRSS44E7EML9 344 aa17.47■□□□□ 0.39
SPOP-220ENST00000515508 H3BMM5 538 aa17.47■□□□□ 0.39
SPOP-220ENST00000515508 ESR1P03372 595 aa17.47■□□□□ 0.39
SPOP-220ENST00000515508 EZRP15311 586 aaKnown RBP17.47■□□□□ 0.39
SPOP-220ENST00000515508 NPY2RP49146 381 aa17.47■□□□□ 0.39
SPOP-220ENST00000515508 KCNK10P57789 538 aa17.47■□□□□ 0.39
SPOP-220ENST00000515508 RELAQ04206 551 aa17.47■□□□□ 0.39
SPOP-220ENST00000515508 SIX1Q15475 284 aaPredicted RBP17.47■□□□□ 0.39
SPOP-220ENST00000515508 ANKRD20A4Q4UJ75 823 aa17.47■□□□□ 0.39
SPOP-220ENST00000515508 SP5Q6BEB4 398 aaPredicted RBP17.47■□□□□ 0.39
SPOP-220ENST00000515508 SUSD1Q6UWL2 747 aa17.47■□□□□ 0.39
SPOP-220ENST00000515508 OTUD6BQ8N6M0 293 aa17.47■□□□□ 0.39
SPOP-220ENST00000515508 MFSD3Q96ES6 412 aa17.47■□□□□ 0.39
SPOP-220ENST00000515508 TCF12Q99081 682 aa17.47■□□□□ 0.39
SPOP-220ENST00000515508 UNKQ9C0B0 810 aaKnown RBP17.47■□□□□ 0.39
SPOP-220ENST00000515508 ZNF700Q9H0M5 742 aa17.47■□□□□ 0.39
SPOP-220ENST00000515508 BFARQ9NZS9 450 aa17.47■□□□□ 0.39
SPOP-220ENST00000515508 TSR3Q9UJK0 312 aaKnown RBP17.47■□□□□ 0.39
SPOP-220ENST00000515508 FFAR3O14843 346 aa17.46■□□□□ 0.39
SPOP-220ENST00000515508 GPR42O15529 346 aa17.46■□□□□ 0.39
SPOP-220ENST00000515508 FOXS1O43638 330 aa17.46■□□□□ 0.39
SPOP-220ENST00000515508 VAPBO95292 243 aa17.46■□□□□ 0.39
SPOP-220ENST00000515508 HEXBP07686 556 aa17.46■□□□□ 0.39
SPOP-220ENST00000515508 CELA2AP08217 269 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms