RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 KMT5CQ86Y97 462 aa20.19■□□□□ 0.82
LSM6-207ENST00000515311 SLITRK4Q8IW52 837 aa20.19■□□□□ 0.82
LSM6-207ENST00000515311 RAB3IL1Q8TBN0 382 aa20.19■□□□□ 0.82
LSM6-207ENST00000515311 ZUFSPQ96AP4 578 aa20.19■□□□□ 0.82
LSM6-207ENST00000515311 WDR34Q96EX3 536 aa20.19■□□□□ 0.82
LSM6-207ENST00000515311 CNDP1Q96KN2 507 aa20.19■□□□□ 0.82
LSM6-207ENST00000515311 NSUN5Q96P11 429 aaKnown RBP20.19■□□□□ 0.82
LSM6-207ENST00000515311 MAP3K3Q99759 626 aa20.19■□□□□ 0.82
LSM6-207ENST00000515311 GATA5Q9BWX5 397 aaPredicted RBP20.19■□□□□ 0.82
LSM6-207ENST00000515311 IPPKQ9H8X2 491 aa20.19■□□□□ 0.82
LSM6-207ENST00000515311 ZBTB26Q9HCK0 441 aa20.19■□□□□ 0.82
LSM6-207ENST00000515311 SLC6A20Q9NP91 592 aa20.19■□□□□ 0.82
LSM6-207ENST00000515311 INTS9Q9NV88 658 aaKnown RBP20.19■□□□□ 0.82
LSM6-207ENST00000515311 SNX7Q9UNH6 387 aa20.19■□□□□ 0.82
LSM6-207ENST00000515311 CFAP54Q96N23 3096 aa20.18■□□□□ 0.82
LSM6-207ENST00000515311 IGKV1-8A0A0C4DH67 115 aa20.18■□□□□ 0.82
LSM6-207ENST00000515311 WDR91A4D1P6 747 aa20.18■□□□□ 0.82
LSM6-207ENST00000515311 E7EQ34 232 aa20.18■□□□□ 0.82
LSM6-207ENST00000515311 KIF1CO43896 1103 aaKnown RBP20.18■□□□□ 0.82
LSM6-207ENST00000515311 NPHS1O60500 1241 aa20.18■□□□□ 0.82
LSM6-207ENST00000515311 RASSF9O75901 435 aa20.18■□□□□ 0.82
LSM6-207ENST00000515311 KCNK5O95279 499 aa20.18■□□□□ 0.82
LSM6-207ENST00000515311 CDH1P12830 882 aa20.18■□□□□ 0.82
LSM6-207ENST00000515311 GRK2P25098 689 aa20.18■□□□□ 0.82
LSM6-207ENST00000515311 CASP2P42575 452 aa20.18■□□□□ 0.82
LSM6-207ENST00000515311 CCR8P51685 355 aa20.18■□□□□ 0.82
LSM6-207ENST00000515311 RELAQ04206 551 aa20.18■□□□□ 0.82
LSM6-207ENST00000515311 LCP2Q13094 533 aa20.18■□□□□ 0.82
LSM6-207ENST00000515311 E2F2Q14209 437 aa20.18■□□□□ 0.82
LSM6-207ENST00000515311 CHI3L2Q15782 390 aa20.18■□□□□ 0.82
LSM6-207ENST00000515311 TBCCQ15814 346 aa20.18■□□□□ 0.82
LSM6-207ENST00000515311 CACHD1Q5VU97 1274 aa20.18■□□□□ 0.82
LSM6-207ENST00000515311 CDCP2Q5VXM1 449 aa20.18■□□□□ 0.82
LSM6-207ENST00000515311 ATG9BQ674R7 924 aa20.18■□□□□ 0.82
LSM6-207ENST00000515311 ZNF425Q6IV72 752 aa20.18■□□□□ 0.82
LSM6-207ENST00000515311 NXPE4Q6UWF7 544 aa20.18■□□□□ 0.82
LSM6-207ENST00000515311 ALYREFQ86V81 257 aaKnown RBP20.18■□□□□ 0.82
LSM6-207ENST00000515311 TRIM42Q8IWZ5 723 aa20.18■□□□□ 0.82
LSM6-207ENST00000515311 FAM20CQ8IXL6 584 aa20.18■□□□□ 0.82
LSM6-207ENST00000515311 OR4K1Q8NGD4 311 aa20.18■□□□□ 0.82
LSM6-207ENST00000515311 PPM1MQ96MI6 270 aa20.18■□□□□ 0.82
LSM6-207ENST00000515311 TMEM74Q96NL1 305 aa20.18■□□□□ 0.82
LSM6-207ENST00000515311 TRAPPC9Q96Q05 1148 aa20.18■□□□□ 0.82
LSM6-207ENST00000515311 DPH7Q9BTV6 452 aa20.18■□□□□ 0.82
LSM6-207ENST00000515311 CHRNA10Q9GZZ6 450 aa20.18■□□□□ 0.82
LSM6-207ENST00000515311 NOL11Q9H8H0 719 aaKnown RBP20.18■□□□□ 0.82
LSM6-207ENST00000515311 PELI2Q9HAT8 420 aa20.18■□□□□ 0.82
LSM6-207ENST00000515311 SEMA4BQ9NPR2 832 aaPredicted RBP20.18■□□□□ 0.82
LSM6-207ENST00000515311 TMEM184CQ9NVA4 438 aa20.18■□□□□ 0.82
LSM6-207ENST00000515311 CUEDC1Q9NWM3 386 aaPredicted RBP20.18■□□□□ 0.82
LSM6-207ENST00000515311 ADAMTS20P59510 1910 aa20.17■□□□□ 0.82
LSM6-207ENST00000515311 IGHV5-51A0A0C4DH38 117 aa20.17■□□□□ 0.82
LSM6-207ENST00000515311 OR2A25A4D2G3 310 aa20.17■□□□□ 0.82
LSM6-207ENST00000515311 SLC9B1P1A6NJY1 282 aa20.17■□□□□ 0.82
LSM6-207ENST00000515311 OR7A17O14581 309 aa20.17■□□□□ 0.82
LSM6-207ENST00000515311 GIPC1O14908 333 aa20.17■□□□□ 0.82
LSM6-207ENST00000515311 UGDHO60701 494 aa20.17■□□□□ 0.82
LSM6-207ENST00000515311 ZBTB11O95625 1053 aaPredicted RBP20.17■□□□□ 0.82
LSM6-207ENST00000515311 OTCP00480 354 aa20.17■□□□□ 0.82
LSM6-207ENST00000515311 SERPINE1P05121 402 aa20.17■□□□□ 0.82
LSM6-207ENST00000515311 NEFHP12036 1026 aa20.17■□□□□ 0.82
LSM6-207ENST00000515311 PVRP15151 417 aa20.17■□□□□ 0.82
LSM6-207ENST00000515311 ST6GAL1P15907 406 aa20.17■□□□□ 0.82
LSM6-207ENST00000515311 MAGP20916 626 aa20.17■□□□□ 0.82
LSM6-207ENST00000515311 CDH13P55290 713 aa20.17■□□□□ 0.82
LSM6-207ENST00000515311 ZFP36L1Q07352 338 aaKnown RBP20.17■□□□□ 0.82
LSM6-207ENST00000515311 FIGLAQ6QHK4 219 aa20.17■□□□□ 0.82
LSM6-207ENST00000515311 ARHGAP22Q7Z5H3 698 aa20.17■□□□□ 0.82
LSM6-207ENST00000515311 TMPRSS11BQ86T26 416 aa20.17■□□□□ 0.82
LSM6-207ENST00000515311 C19orf47Q8N9M1 422 aaKnown RBP20.17■□□□□ 0.82
LSM6-207ENST00000515311 PPP1R14CQ8TAE6 165 aa20.17■□□□□ 0.82
LSM6-207ENST00000515311 FAM76AQ8TAV0 307 aa20.17■□□□□ 0.82
LSM6-207ENST00000515311 KLHL6Q8WZ60 621 aa20.17■□□□□ 0.82
LSM6-207ENST00000515311 CCDC74BQ96LY2 380 aa20.17■□□□□ 0.82
LSM6-207ENST00000515311 ZNF382Q96SR6 550 aa20.17■□□□□ 0.82
LSM6-207ENST00000515311 PLCD4Q9BRC7 762 aa20.17■□□□□ 0.82
LSM6-207ENST00000515311 NTMT1Q9BV86 223 aa20.17■□□□□ 0.82
LSM6-207ENST00000515311 DRC3Q9H069 523 aa20.17■□□□□ 0.82
LSM6-207ENST00000515311 ZNF768Q9H5H4 540 aaKnown RBP20.17■□□□□ 0.82
LSM6-207ENST00000515311 KLHL3Q9UH77 587 aa20.17■□□□□ 0.82
LSM6-207ENST00000515311 CNOT1A5YKK6 2376 aaKnown RBP20.16■□□□□ 0.82
LSM6-207ENST00000515311 TMEM114B3SHH9 223 aa20.16■□□□□ 0.82
LSM6-207ENST00000515311 H7BY64 318 aa20.16■□□□□ 0.82
LSM6-207ENST00000515311 WFS1O76024 890 aa20.16■□□□□ 0.82
LSM6-207ENST00000515311 C1GALT1C1LP0DN25 315 aa20.16■□□□□ 0.82
LSM6-207ENST00000515311 BGNP21810 368 aa20.16■□□□□ 0.82
LSM6-207ENST00000515311 MPSTP25325 297 aa20.16■□□□□ 0.82
LSM6-207ENST00000515311 CCKBRP32239 447 aa20.16■□□□□ 0.82
LSM6-207ENST00000515311 ATP1A2P50993 1020 aa20.16■□□□□ 0.82
LSM6-207ENST00000515311 CCNG1P51959 295 aa20.16■□□□□ 0.82
LSM6-207ENST00000515311 PDX1P52945 283 aa20.16■□□□□ 0.82
LSM6-207ENST00000515311 IRF8Q02556 426 aa20.16■□□□□ 0.82
LSM6-207ENST00000515311 GALNT1Q10472 559 aaPredicted RBP20.16■□□□□ 0.82
LSM6-207ENST00000515311 RCN2Q14257 317 aa20.16■□□□□ 0.82
LSM6-207ENST00000515311 RBBP7Q16576 425 aa20.16■□□□□ 0.82
LSM6-207ENST00000515311 XKR6Q5GH73 641 aa20.16■□□□□ 0.82
LSM6-207ENST00000515311 CATSPEREQ5SY80 951 aa20.16■□□□□ 0.82
LSM6-207ENST00000515311 FCRL6Q6DN72 434 aa20.16■□□□□ 0.82
LSM6-207ENST00000515311 DHRS13Q6UX07 377 aa20.16■□□□□ 0.82
LSM6-207ENST00000515311 ZCCHC23Q6ZST2 131 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms