RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 MBLAC1A4D2B0 266 aaPredicted RBP3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 GOLGA6L9A6NEM1 432 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 IFITM10A6NMD0 228 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 DAB1O75553 588 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 CLDN14O95500 239 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 NADKO95544 446 aaPredicted RBP3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 GGPS1O95749 300 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 ZNF883P0CG24 379 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 CSH1P0DML2 217 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 CSH2P0DML3 217 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 HSPA5P11021 654 aaKnown RBP3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 TMEM11P17152 192 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 GABRB1P18505 474 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 RRM1P23921 792 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 FCARP24071 287 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 BDKRB2P30411 391 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 HOXA9P31269 272 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 HOXA13P31271 388 aaPredicted RBP3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 PIK3CAP42336 1068 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 PEX5P50542 639 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 NLRP5P59047 1200 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 BRWD1-AS2P59051 145 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 CSNK2A1P68400 391 aaPredicted RBP3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 TFAP4Q01664 338 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 ZNF155Q12901 538 aaPredicted RBP3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 CUL4AQ13619 759 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 IRF3Q14653 427 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 CALCRLQ16602 461 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 ASTE1Q2TB18 679 aaPredicted RBP3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 ZSCAN23Q3MJ62 389 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 LINC00303Q3SY05 128 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 CLLU1OSQ5K130 101 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 PPM1LQ5SGD2 360 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 PLEKHS1Q5SXH7 462 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 LRIF1Q5T3J3 769 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 FRG2Q64ET8 278 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 DUS1LQ6P1R4 473 aaKnown RBP3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 KCTD18Q6PI47 426 aaPredicted RBP3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 VITQ6UXI7 678 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 CREB3L2Q70SY1 520 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 TSPAN33Q86UF1 283 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 NR2C2APQ86WQ0 139 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 HACE1Q8IYU2 909 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 BEST3Q8N1M1 668 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 CSNK2A3Q8NEV1 391 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 MTBPQ96DY7 904 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 GRAMD2BQ96HH9 432 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 LMLNQ96KR4 655 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 FAM20AQ96MK3 541 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 IWS1Q96ST2 819 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 CSF3RQ99062 836 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 TM6SF1Q9BZW5 370 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 C6orf106Q9H6K1 298 aaPredicted RBP3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 PCDH9Q9HC56 1237 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 CWC15Q9P013 229 aaKnown RBP3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 ACSL5Q9ULC5 683 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 ATRQ13535 2644 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 CELSR2Q9HCU4 2923 aa3.45□□□□□ -1.86
TOPBP1-208ENST00000511439 WDR19Q8NEZ3 1342 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 CENPEQ02224 2701 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 CDRT15L2A8MXV6 281 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 M0QZ24 198 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 CCL16O15467 120 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 AP5Z1O43299 807 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 TSPAN9O75954 239 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 KDM4BO94953 1096 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 SIX3O95343 332 aaPredicted RBP3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 ZBTB11O95625 1053 aaPredicted RBP3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 PPP1R3DO95685 299 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 CLDN1O95832 211 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 EGFP01133 1207 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 DAOP14920 347 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 PORP16435 677 aaPredicted RBP3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 UBA1P22314 1058 aaKnown RBP3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 ACADLP28330 430 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 PRCPP42785 496 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 SLC1A4P43007 532 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 FASLGP48023 281 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 CLCNKAP51800 687 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 TAS2R40P59535 323 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 SNAP25P60880 206 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 MRPS34P82930 218 aaKnown RBP3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 DLG1Q12959 904 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 DMC1Q14565 340 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 TWISTNBQ3B726 338 aaPredicted RBP3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 PCGF3Q3KNV8 242 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 RAB41Q5JT25 222 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 KIAA0930Q6ICG6 404 aaPredicted RBP3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 ZNF280DQ6N043 979 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 FAM122CQ6P4D5 195 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 WDR73Q6P4I2 378 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 KRBA2Q6ZNG9 492 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 CFAP77Q6ZQR2 320 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 TIPARPQ7Z3E1 657 aaKnown RBP3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 SZRD1Q7Z422 152 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 HAUS6Q7Z4H7 955 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 NRROSQ86YC3 692 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 PCDH20Q8N6Y1 951 aaKnown RBP3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 HJURPQ8NCD3 748 aaPredicted RBP3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 OR2AK2Q8NG84 335 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms