RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 HNRNPDLO14979 420 aaKnown RBP4.39□□□□□ -1.71
NIPBL-206ENST00000509429 MDM4O15151 490 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 TRIM24O15164 1050 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 TOX3O15405 576 aaPredicted RBP4.39□□□□□ -1.71
NIPBL-206ENST00000509429 RNMTO43148 476 aaKnown RBP4.39□□□□□ -1.71
NIPBL-206ENST00000509429 CHMP2AO43633 222 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 ATG13O75143 517 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 PRPF6O94906 941 aaKnown RBP4.39□□□□□ -1.71
NIPBL-206ENST00000509429 SIX3O95343 332 aaPredicted RBP4.39□□□□□ -1.71
NIPBL-206ENST00000509429 IL1BP01584 269 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 IFNA16P05015 189 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 SCG5P05408 212 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 PLEKP08567 350 aaPredicted RBP4.39□□□□□ -1.71
NIPBL-206ENST00000509429 IQCF3P0C7M6 154 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 CCL2P13500 99 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 ATP2A2P16615 1042 aaKnown RBP4.39□□□□□ -1.71
NIPBL-206ENST00000509429 ERCC2P18074 760 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 KRT15P19012 456 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 HK1P19367 917 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 AGXTP21549 392 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 AOAHP28039 575 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 CD40LGP29965 261 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 ECI1P42126 302 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 GRIA2P42262 883 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 SYKP43405 635 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 ERFP50548 548 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 CCNG1P51959 295 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 EMP2P54851 167 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 GNG2P59768 71 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 ACTBP60709 375 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 ACTA2P62736 377 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 ACTG1P63261 375 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 ACTG2P63267 376 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 ACTC1P68032 377 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 ACTA1P68133 377 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 NOMO3P69849 1222 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 ECT2LQ008S8 904 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 RAD51Q06609 339 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 CDH17Q12864 832 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 RESTQ13127 1097 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 PRKAA1Q13131 559 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 DCTN2Q13561 401 aaKnown RBP4.39□□□□□ -1.71
NIPBL-206ENST00000509429 KCNJ12Q14500 433 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 MFSD13AQ14CX5 517 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 NOMO1Q15155 1222 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 PON3Q15166 354 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 LTB4RQ15722 352 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 ETFDHQ16134 617 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 UAP1Q16222 522 aaPredicted RBP4.39□□□□□ -1.71
NIPBL-206ENST00000509429 NTRK2Q16620 822 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 BMT2Q1RMZ1 405 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 HYAL4Q2M3T9 481 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 TMEM44Q2T9K0 475 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 CERKLQ49MI3 558 aaPredicted RBP4.39□□□□□ -1.71
NIPBL-206ENST00000509429 BEX5Q5H9J7 111 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 NOMO2Q5JPE7 1267 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 TTC38Q5R3I4 469 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 MFSD14CQ5VZR4 134 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 BSPRYQ5W0U4 402 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 KCTD16Q68DU8 428 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 JADE1Q6IE81 842 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 SLC25A25Q6KCM7 469 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 TMEM71Q6P5X7 295 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 ZNF530Q6P9A1 599 aaPredicted RBP4.39□□□□□ -1.71
NIPBL-206ENST00000509429 CLEC9AQ6UXN8 241 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 Q6ZNX1 250 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 USP43Q70EL4 1123 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 KCTD9Q7L273 389 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 VTCN1Q7Z7D3 282 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 CROCCP3Q8IVE0 287 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 ARID3BQ8IVW6 561 aaPredicted RBP4.39□□□□□ -1.71
NIPBL-206ENST00000509429 VSTM4Q8IW00 320 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 SELENOHQ8IZQ5 122 aaKnown RBP4.39□□□□□ -1.71
NIPBL-206ENST00000509429 ZNF786Q8N393 782 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 FRMD1Q8N878 549 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 TTC29Q8NA56 475 aaPredicted RBP4.39□□□□□ -1.71
NIPBL-206ENST00000509429 SMRP1Q8NCR6 262 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 RDM1Q8NG50 284 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 OR5M1Q8NGP8 315 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 OR2T3Q8NH03 318 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 RP9Q8TA86 221 aaKnown RBP4.39□□□□□ -1.71
NIPBL-206ENST00000509429 CYP2W1Q8TAV3 490 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 RIN2Q8WYP3 895 aaPredicted RBP4.39□□□□□ -1.71
NIPBL-206ENST00000509429 RSC1A1Q92681 617 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 KAT2AQ92830 837 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 BCL2L2Q92843 193 aaPredicted RBP4.39□□□□□ -1.71
NIPBL-206ENST00000509429 MRGPRFQ96AM1 343 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 EID2BQ96D98 161 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 PLEKHA8Q96JA3 519 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 DNAJC1Q96KC8 554 aaKnown RBP4.39□□□□□ -1.71
NIPBL-206ENST00000509429 LURAP1Q96LR2 239 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 C9orf72Q96LT7 481 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 C5orf34Q96MH7 638 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 ZNF48Q96MX3 618 aaPredicted RBP4.39□□□□□ -1.71
NIPBL-206ENST00000509429 SPATA13Q96N96 652 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 NECTIN4Q96NY8 510 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 TAAR1Q96RJ0 339 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 SSX3Q99909 188 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 CITED1Q99966 193 aa4.39□□□□□ -1.71
NIPBL-206ENST00000509429 FAM213AQ9BRX8 229 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms