RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, human

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFKB1-208	ENST00000509165	C5orf67	F2Z3F1	127 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	HS3ST1	O14792	307 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	FIBP	O43427	364 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	JAK2	O60674	1132 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	WISP2	O76076	250 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	RTN3	O95197	1032 aa	Predicted RBP	3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	IPO7	O95373	1038 aa	Known RBP	3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	MMP1	P03956	469 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	DCN	P07585	359 aa	Known RBP	3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	FAM86B2	P0C5J1	330 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	PAX1	P15863	534 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	POLR2C	P19387	275 aa	Predicted RBP	3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	SYT1	P21579	422 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	U2AF2	P26368	475 aa	Known RBP eCLIP	3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	CALML3	P27482	149 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	GNA11	P29992	359 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	CCND2	P30279	289 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	ELF1	P32519	619 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	CTNNB1	P35222	781 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	ARCN1	P48444	511 aa	Known RBP	3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	MRPL12	P52815	198 aa	Known RBP	3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	CRIP2	P52943	208 aa	Predicted RBP	3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	HMGN5	P82970	282 aa	Known RBP	3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	MPP1	Q00013	466 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	GAGE5	Q13069	117 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	GAGE6	Q13070	117 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	ITGB3BP	Q13352	177 aa	Predicted RBP	3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	STXBP2	Q15833	593 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	UBE2S	Q16763	222 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	MRGPRG-AS1	Q2M3A8	158 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	MYLK3	Q32MK0	819 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	RAB6C	Q53S08	254 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	SPECC1	Q5M775	1068 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	CELF3	Q5SZQ8	465 aa	Known RBP	3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	JAKMIP3	Q5VZ66	844 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	PLA2G4F	Q68DD2	849 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	OR7E24	Q6IFN5	339 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	FAM171B	Q6P995	826 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165		Q75L30	129 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	TLK2	Q86UE8	772 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	TSPAN33	Q86UF1	283 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	MAP7D3	Q8IWC1	876 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	FBXO16	Q8IX29	292 aa	Predicted RBP	3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	MYOCD	Q8IZQ8	938 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	NECAB1	Q8N987	351 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	PPTC7	Q8NI37	304 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	ATP8B4	Q8TF62	1192 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	CCDC12	Q8WUD4	166 aa	Predicted RBP	3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	FBXO17	Q96EF6	278 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	EGLN2	Q96KS0	407 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	ZNF583	Q96ND8	569 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	DUX3	Q96PT4	197 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	RTP3	Q9BQQ7	232 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	SLC26A6	Q9BXS9	759 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	RAB6C	Q9H0N0	254 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	C6orf50	Q9HD87	102 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	KCNMB3	Q9NPA1	279 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	VPS54	Q9P1Q0	977 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	ORC3	Q9UBD5	711 aa	Predicted RBP	3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	UBA2	Q9UBT2	640 aa	Predicted RBP	3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	GAB2	Q9UQC2	676 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	SMC3	Q9UQE7	1217 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	ATP6V1D	Q9Y5K8	247 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	KCNE2	Q9Y6J6	123 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	MGA	Q8IWI9	3026 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	ATM	Q13315	3056 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	COL6A6	A6NMZ7	2263 aa		3.84	□□□□□ -1.79
NFKB1-208	ENST00000509165	CENPE	Q02224	2701 aa		3.84	□□□□□ -1.8
NFKB1-208	ENST00000509165	LRBA	P50851	2863 aa		3.84	□□□□□ -1.8
NFKB1-208	ENST00000509165		B4DLN1	442 aa		3.83	□□□□□ -1.8
NFKB1-208	ENST00000509165		B4E171	279 aa		3.83	□□□□□ -1.8
NFKB1-208	ENST00000509165	EIF3D	O15371	548 aa	Known RBP eCLIP	3.83	□□□□□ -1.8
NFKB1-208	ENST00000509165	HCRTR2	O43614	444 aa		3.83	□□□□□ -1.8
NFKB1-208	ENST00000509165	STX6	O43752	255 aa		3.83	□□□□□ -1.8
NFKB1-208	ENST00000509165	CREB3	O43889	395 aa		3.83	□□□□□ -1.8
NFKB1-208	ENST00000509165	KIN	O60870	393 aa	Known RBP	3.83	□□□□□ -1.8
NFKB1-208	ENST00000509165	ATP9A	O75110	1047 aa		3.83	□□□□□ -1.8
NFKB1-208	ENST00000509165	SLC25A12	O75746	678 aa		3.83	□□□□□ -1.8
NFKB1-208	ENST00000509165	PSMD10	O75832	226 aa		3.83	□□□□□ -1.8
NFKB1-208	ENST00000509165	STBD1	O95210	358 aa		3.83	□□□□□ -1.8
NFKB1-208	ENST00000509165	KCNK5	O95279	499 aa		3.83	□□□□□ -1.8
NFKB1-208	ENST00000509165	CCNE2	O96020	404 aa		3.83	□□□□□ -1.8
NFKB1-208	ENST00000509165	GH1	P01241	217 aa		3.83	□□□□□ -1.8
NFKB1-208	ENST00000509165	IGHV4-39	P01824	125 aa		3.83	□□□□□ -1.8
NFKB1-208	ENST00000509165	AMBP	P02760	352 aa		3.83	□□□□□ -1.8
NFKB1-208	ENST00000509165	PRSS1	P07477	247 aa		3.83	□□□□□ -1.8
NFKB1-208	ENST00000509165	SUPT20HL2	P0C7V6	817 aa		3.83	□□□□□ -1.8
NFKB1-208	ENST00000509165	GJB2	P29033	226 aa		3.83	□□□□□ -1.8
NFKB1-208	ENST00000509165	CDKN1A	P38936	164 aa		3.83	□□□□□ -1.8
NFKB1-208	ENST00000509165	TSPAN7	P41732	249 aa		3.83	□□□□□ -1.8
NFKB1-208	ENST00000509165	NAPA	P54920	295 aa		3.83	□□□□□ -1.8
NFKB1-208	ENST00000509165	TAS2R40	P59535	323 aa		3.83	□□□□□ -1.8
NFKB1-208	ENST00000509165	RPS3A	P61247	264 aa	Known RBP	3.83	□□□□□ -1.8
NFKB1-208	ENST00000509165	MRPS34	P82930	218 aa	Known RBP	3.83	□□□□□ -1.8
NFKB1-208	ENST00000509165	COG7	P83436	770 aa		3.83	□□□□□ -1.8
NFKB1-208	ENST00000509165	ZBED6	P86452	979 aa		3.83	□□□□□ -1.8
NFKB1-208	ENST00000509165	ORC2	Q13416	577 aa	Predicted RBP	3.83	□□□□□ -1.8
NFKB1-208	ENST00000509165	ADIPOQ	Q15848	244 aa		3.83	□□□□□ -1.8
NFKB1-208	ENST00000509165	LPAL2	Q16609	132 aa		3.83	□□□□□ -1.8
NFKB1-208	ENST00000509165	CEP55	Q53EZ4	464 aa		3.83	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 23 ms