RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 CLPXO76031 633 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 DEXIO95424 95 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 CBX6O95503 412 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 MMP1P03956 469 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 CAPN1P07384 714 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 HNRNPA1P09651 372 aaKnown RBP eCLIP4.87□□□□□ -1.63
LINC01088-205ENST00000509088 TRAPPC2P0DI81 140 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 TRAPPC2BP0DI82 140 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 MCF2P10911 925 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 GFAPP14136 432 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 PKMP14618 531 aaKnown RBP4.87□□□□□ -1.63
LINC01088-205ENST00000509088 IFNAR1P17181 557 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 UGT1A6P19224 532 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 UGT1A1P22309 533 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 UGT1A4P22310 534 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 PSMA4P25789 261 aaKnown RBP4.87□□□□□ -1.63
LINC01088-205ENST00000509088 RPA1P27694 616 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 GSTM2P28161 218 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 CDC25AP30304 524 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 RPL9P32969 192 aaKnown RBP4.87□□□□□ -1.63
LINC01088-205ENST00000509088 UGT1A3P35503 534 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 UGT1A5P35504 534 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 PSMC2P35998 433 aaKnown RBP4.87□□□□□ -1.63
LINC01088-205ENST00000509088 STAT1P42224 750 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 SERPINB10P48595 397 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 PLTPP55058 493 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 HADHBP55084 474 aaKnown RBP4.87□□□□□ -1.63
LINC01088-205ENST00000509088 SMARCB1Q12824 385 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 NAB1Q13506 487 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 ALKBH1Q13686 389 aaKnown RBP4.87□□□□□ -1.63
LINC01088-205ENST00000509088 GNA13Q14344 377 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 HERC3Q15034 1050 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 SF3B4Q15427 424 aaKnown RBP eCLIP4.87□□□□□ -1.63
LINC01088-205ENST00000509088 TRIP13Q15645 432 aaPredicted RBP4.87□□□□□ -1.63
LINC01088-205ENST00000509088 LETM2Q2VYF4 491 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 KRTAP27-1Q3LI81 207 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 FBXO43Q4G163 708 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 INTS11Q5TA45 600 aaKnown RBP4.87□□□□□ -1.63
LINC01088-205ENST00000509088 ARHGEF16Q5VV41 709 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 IRAK1BP1Q5VVH5 260 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 KRT80Q6KB66 452 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 CGB2Q6NT52 195 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 TTI2Q6NXR4 508 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 NEK5Q6P3R8 708 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 DENND1BQ6P3S1 775 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 RFWD3Q6PCD5 774 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 MCM10Q7L590 875 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 NIPA1Q7RTP0 329 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 CAMK1DQ8IU85 385 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 UEVLDQ8IX04 471 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 CCDC105Q8IYK2 499 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 SIX6OS1Q8N1H7 587 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 IQCF1Q8N6M8 205 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 UBL4BQ8N7F7 174 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 LRRC57Q8N9N7 239 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 SNX31Q8N9S9 440 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 KBTBD3Q8NAB2 608 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 SLC4A11Q8NBS3 891 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 PPP4R1Q8TF05 950 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 GRK7Q8WTQ7 553 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 P2RX5Q93086 422 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 VPS33AQ96AX1 596 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 ISOC1Q96CN7 298 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 C11orf24Q96F05 449 aaPredicted RBP4.87□□□□□ -1.63
LINC01088-205ENST00000509088 MAGED4Q96JG8 741 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 LMLNQ96KR4 655 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 TCEANC2Q96MN5 208 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 OPALINQ96PE5 141 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 SERPINI1Q99574 410 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 CLSTN3Q9BQT9 956 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 TRAF4Q9BUZ4 470 aaPredicted RBP4.87□□□□□ -1.63
LINC01088-205ENST00000509088 ACAT2Q9BWD1 397 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 TRIM31Q9BZY9 425 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 C6orf62Q9GZU0 229 aaPredicted RBP4.87□□□□□ -1.63
LINC01088-205ENST00000509088 WWP1Q9H0M0 922 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 GLT8D2Q9H1C3 349 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 NEUROG2Q9H2A3 272 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 C8orf33Q9H7E9 229 aaPredicted RBP4.87□□□□□ -1.63
LINC01088-205ENST00000509088 UGT1A7Q9HAW7 530 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 UGT1A10Q9HAW8 530 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 UGT1A8Q9HAW9 530 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 FZD3Q9NPG1 666 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 ZC4H2Q9NQZ6 224 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 AGPAT5Q9NUQ2 364 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 MRGBPQ9NV56 204 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 TMEM248Q9NWD8 314 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 ARL15Q9NXU5 204 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 MRPL39Q9NYK5 338 aaKnown RBP4.87□□□□□ -1.63
LINC01088-205ENST00000509088 ARMCX3Q9UH62 379 aaPredicted RBP4.87□□□□□ -1.63
LINC01088-205ENST00000509088 SLC7A8Q9UHI5 535 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 CD207Q9UJ71 328 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 PACSIN2Q9UNF0 486 aaPredicted RBP4.87□□□□□ -1.63
LINC01088-205ENST00000509088 EIF3LQ9Y262 564 aaKnown RBP4.87□□□□□ -1.63
LINC01088-205ENST00000509088 DTX4Q9Y2E6 619 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 CPQQ9Y646 472 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 STON1Q9Y6Q2 735 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 SLC4A4Q9Y6R1 1079 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 EMSYQ7Z589 1322 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 TULP4Q9NRJ4 1543 aa4.87□□□□□ -1.63
LINC01088-205ENST00000509088 ADAMTS12P58397 1594 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms