RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 ARL16Q0P5N6 197 aa5.49□□□□□ -1.53
HERC4-213ENST00000506515 SCARB2Q14108 478 aa5.49□□□□□ -1.53
HERC4-213ENST00000506515 ZNF718Q3SXZ3 478 aa5.49□□□□□ -1.53
HERC4-213ENST00000506515 C11orf63Q6NUN7 778 aa5.49□□□□□ -1.53
HERC4-213ENST00000506515 ZNF554Q86TJ5 538 aa5.49□□□□□ -1.53
HERC4-213ENST00000506515 PLD3Q8IV08 490 aa5.49□□□□□ -1.53
HERC4-213ENST00000506515 TMEM139Q8IV31 216 aa5.49□□□□□ -1.53
HERC4-213ENST00000506515 OR8H3Q8N146 312 aa5.49□□□□□ -1.53
HERC4-213ENST00000506515 THAP8Q8NA92 274 aa5.49□□□□□ -1.53
HERC4-213ENST00000506515 OR1J1Q8NGS3 322 aa5.49□□□□□ -1.53
HERC4-213ENST00000506515 DEPDC1BQ8WUY9 529 aa5.49□□□□□ -1.53
HERC4-213ENST00000506515 LMLNQ96KR4 655 aa5.49□□□□□ -1.53
HERC4-213ENST00000506515 EGFL8Q99944 293 aa5.49□□□□□ -1.53
HERC4-213ENST00000506515 THUMPD3Q9BV44 507 aaKnown RBP5.49□□□□□ -1.53
HERC4-213ENST00000506515 TRMT61BQ9BVS5 477 aaKnown RBP5.49□□□□□ -1.53
HERC4-213ENST00000506515 ZNF556Q9HAH1 456 aa5.49□□□□□ -1.53
HERC4-213ENST00000506515 GKN1Q9NS71 199 aa5.49□□□□□ -1.53
HERC4-213ENST00000506515 ZFP57Q9NU63 452 aa5.49□□□□□ -1.53
HERC4-213ENST00000506515 TMOD3Q9NYL9 352 aa5.49□□□□□ -1.53
HERC4-213ENST00000506515 POLLQ9UGP5 575 aa5.49□□□□□ -1.53
HERC4-213ENST00000506515 DAPK2Q9UIK4 370 aa5.49□□□□□ -1.53
HERC4-213ENST00000506515 TMED3Q9Y3Q3 217 aa5.49□□□□□ -1.53
HERC4-213ENST00000506515 POMT1Q9Y6A1 747 aa5.49□□□□□ -1.53
HERC4-213ENST00000506515 KIF24Q5T7B8 1368 aa5.49□□□□□ -1.53
HERC4-213ENST00000506515 PALLDQ8WX93 1383 aa5.49□□□□□ -1.53
HERC4-213ENST00000506515 RGPD5Q99666 1765 aa5.49□□□□□ -1.53
HERC4-213ENST00000506515 CLIC2O15247 247 aa5.48□□□□□ -1.53
HERC4-213ENST00000506515 HAPLN1P10915 354 aaPredicted RBP5.48□□□□□ -1.53
HERC4-213ENST00000506515 TLX1P31314 330 aaPredicted RBP5.48□□□□□ -1.53
HERC4-213ENST00000506515 MNDAP41218 407 aa5.48□□□□□ -1.53
HERC4-213ENST00000506515 CRKLP46109 303 aaKnown RBP5.48□□□□□ -1.53
HERC4-213ENST00000506515 NR2C2P49116 596 aa5.48□□□□□ -1.53
HERC4-213ENST00000506515 RGS19P49795 217 aa5.48□□□□□ -1.53
HERC4-213ENST00000506515 BMXP51813 675 aa5.48□□□□□ -1.53
HERC4-213ENST00000506515 UBASH3AP57075 661 aa5.48□□□□□ -1.53
HERC4-213ENST00000506515 RPL36AP83881 106 aaKnown RBP5.48□□□□□ -1.53
HERC4-213ENST00000506515 ZNF415Q09FC8 603 aa5.48□□□□□ -1.53
HERC4-213ENST00000506515 DMP1Q13316 513 aaPredicted RBP5.48□□□□□ -1.53
HERC4-213ENST00000506515 CUL3Q13618 768 aa5.48□□□□□ -1.53
HERC4-213ENST00000506515 VEZF1Q14119 521 aa5.48□□□□□ -1.53
HERC4-213ENST00000506515 FAM219AQ8IW50 185 aa5.48□□□□□ -1.53
HERC4-213ENST00000506515 CDK20Q8IZL9 346 aa5.48□□□□□ -1.53
HERC4-213ENST00000506515 GOT1L1Q8NHS2 421 aaPredicted RBP5.48□□□□□ -1.53
HERC4-213ENST00000506515 CITED2Q99967 270 aaPredicted RBP5.48□□□□□ -1.53
HERC4-213ENST00000506515 CDH20Q9HBT6 801 aa5.48□□□□□ -1.53
HERC4-213ENST00000506515 GTF3C4Q9UKN8 822 aa5.48□□□□□ -1.53
HERC4-213ENST00000506515 LY75O60449 1722 aa5.48□□□□□ -1.53
HERC4-213ENST00000506515 WDR90Q96KV7 1748 aa5.48□□□□□ -1.53
HERC4-213ENST00000506515 FLT1P17948 1338 aa5.48□□□□□ -1.53
HERC4-213ENST00000506515 QRICH2Q9H0J4 1663 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 CD163L1Q9NR16 1453 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 DUXAA6NLW8 204 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 ERVV-2B6SEH9 535 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 CCDC188H7C350 402 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 WDR46O15213 610 aaKnown RBP5.47□□□□□ -1.53
HERC4-213ENST00000506515 PRKNO60260 465 aaPredicted RBP5.47□□□□□ -1.53
HERC4-213ENST00000506515 SAGP10523 405 aaPredicted RBP5.47□□□□□ -1.53
HERC4-213ENST00000506515 FGF5P12034 268 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 DPEP1P16444 411 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 CDC25CP30307 473 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 HOXC8P31273 242 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 HOXC13P31276 330 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 PTGER4P35408 488 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 KRTAP10-11P60412 298 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 BFSP1Q12934 665 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 CA9Q16790 459 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 UGP2Q16851 508 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 ACCSLQ4AC99 568 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 MCMDC2Q4G0Z9 681 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 CCDC184Q52MB2 194 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 FAM76BQ5HYJ3 339 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 DCAF10Q5QP82 559 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 C6orf136Q5SQH8 315 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 C11orf57Q6ZUT1 292 aaPredicted RBP5.47□□□□□ -1.53
HERC4-213ENST00000506515 GLRX5Q86SX6 157 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 OR11H4Q8NGC9 324 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 OLIG1Q8TAK6 271 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 ATP6V1E2Q96A05 226 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 SLC47A1Q96FL8 570 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 NSL1Q96IY1 281 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 RHNO1Q9BSD3 238 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 GTPBP2Q9BX10 602 aaKnown RBP5.47□□□□□ -1.53
HERC4-213ENST00000506515 BICC1Q9H694 974 aaKnown RBP5.47□□□□□ -1.53
HERC4-213ENST00000506515 ECHDC1Q9NTX5 307 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 FAM118AQ9NWS6 357 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 CACNG4Q9UBN1 327 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 EDC4Q6P2E9 1401 aaKnown RBP5.47□□□□□ -1.53
HERC4-213ENST00000506515 PIK3C2AO00443 1686 aa5.47□□□□□ -1.53
HERC4-213ENST00000506515 FAM208AQ9UK61 1670 aaKnown RBP5.47□□□□□ -1.53
HERC4-213ENST00000506515 PXDNLA1KZ92 1463 aa5.46□□□□□ -1.53
HERC4-213ENST00000506515 RNASEH1O60930 286 aaKnown RBP5.46□□□□□ -1.54
HERC4-213ENST00000506515 GBAP04062 536 aa5.46□□□□□ -1.54
HERC4-213ENST00000506515 CSN3P07498 182 aa5.46□□□□□ -1.54
HERC4-213ENST00000506515 INHBAP08476 426 aa5.46□□□□□ -1.54
HERC4-213ENST00000506515 TCEA1P23193 301 aaKnown RBP5.46□□□□□ -1.54
HERC4-213ENST00000506515 LGALS3BPQ08380 585 aa5.46□□□□□ -1.54
HERC4-213ENST00000506515 ITGA7Q13683 1181 aa5.46□□□□□ -1.54
HERC4-213ENST00000506515 ITPRIPL2Q3MIP1 535 aa5.46□□□□□ -1.54
HERC4-213ENST00000506515 SLC26A9Q7LBE3 791 aa5.46□□□□□ -1.54
HERC4-213ENST00000506515 SPATA21Q7Z572 469 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms