RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 SAMHD1Q9Y3Z3 626 aaKnown RBP14.55□□□□□ -0.08
SNF8-203ENST00000504000 HTR3EA5X5Y0 456 aa14.54□□□□□ -0.08
SNF8-203ENST00000504000 UGDHO60701 494 aa14.54□□□□□ -0.08
SNF8-203ENST00000504000 WBP4O75554 376 aaKnown RBP14.54□□□□□ -0.08
SNF8-203ENST00000504000 EPN2O95208 641 aa14.54□□□□□ -0.08
SNF8-203ENST00000504000 ABCB1P08183 1280 aaPredicted RBP14.54□□□□□ -0.08
SNF8-203ENST00000504000 MPC1LP0DKB6 136 aa14.54□□□□□ -0.08
SNF8-203ENST00000504000 CD36P16671 472 aa14.54□□□□□ -0.08
SNF8-203ENST00000504000 HNF1BP35680 557 aa14.54□□□□□ -0.08
SNF8-203ENST00000504000 EIF2DP41214 584 aaKnown RBP14.54□□□□□ -0.08
SNF8-203ENST00000504000 NCS1P62166 190 aa14.54□□□□□ -0.08
SNF8-203ENST00000504000 VLDLRP98155 873 aa14.54□□□□□ -0.08
SNF8-203ENST00000504000 SLC14A1Q13336 389 aa14.54□□□□□ -0.08
SNF8-203ENST00000504000 SP140Q13342 867 aa14.54□□□□□ -0.08
SNF8-203ENST00000504000 TBCEQ15813 527 aaPredicted RBP14.54□□□□□ -0.08
SNF8-203ENST00000504000 CHRNA6Q15825 494 aa14.54□□□□□ -0.08
SNF8-203ENST00000504000 ZNF181Q2M3W8 571 aa14.54□□□□□ -0.08
SNF8-203ENST00000504000 PGS1Q32NB8 556 aa14.54□□□□□ -0.08
SNF8-203ENST00000504000 IQCCQ4KMZ1 466 aa14.54□□□□□ -0.08
SNF8-203ENST00000504000 ATXN7L2Q5T6C5 722 aaPredicted RBP14.54□□□□□ -0.08
SNF8-203ENST00000504000 RETSATQ6NUM9 610 aa14.54□□□□□ -0.08
SNF8-203ENST00000504000 NOXRED1Q6NXP6 359 aa14.54□□□□□ -0.08
SNF8-203ENST00000504000 ZCCHC8Q6NZY4 707 aaKnown RBP14.54□□□□□ -0.08
SNF8-203ENST00000504000 TPGS1Q6ZTW0 290 aa14.54□□□□□ -0.08
SNF8-203ENST00000504000 ANKRD46Q86W74 232 aa14.54□□□□□ -0.08
SNF8-203ENST00000504000 PTOV1Q86YD1 416 aa14.54□□□□□ -0.08
SNF8-203ENST00000504000 NAT16Q8N8M0 369 aa14.54□□□□□ -0.08
SNF8-203ENST00000504000 ZHX1-C8orf76Q96EF9 292 aa14.54□□□□□ -0.08
SNF8-203ENST00000504000 TRMT2BQ96GJ1 504 aaKnown RBP14.54□□□□□ -0.08
SNF8-203ENST00000504000 SYT17Q9BSW7 474 aa14.54□□□□□ -0.08
SNF8-203ENST00000504000 GPRC5BQ9NZH0 403 aa14.54□□□□□ -0.08
SNF8-203ENST00000504000 FCF1Q9Y324 198 aaKnown RBP14.54□□□□□ -0.08
SNF8-203ENST00000504000 DNAH12Q6ZR08 3092 aa14.53□□□□□ -0.08
SNF8-203ENST00000504000 IGLV3-16A0A075B6K0 115 aa14.53□□□□□ -0.08
SNF8-203ENST00000504000 CXorf51AA0A1B0GTR3 108 aa14.53□□□□□ -0.08
SNF8-203ENST00000504000 EFCAB9A8MZ26 197 aa14.53□□□□□ -0.08
SNF8-203ENST00000504000 MYO1GB0I1T2 1018 aa14.53□□□□□ -0.08
SNF8-203ENST00000504000 NUAK1O60285 661 aa14.53□□□□□ -0.08
SNF8-203ENST00000504000 FADS2O95864 444 aaKnown RBP14.53□□□□□ -0.08
SNF8-203ENST00000504000 ENGP17813 658 aa14.53□□□□□ -0.08
SNF8-203ENST00000504000 PPIBP23284 216 aaKnown RBP14.53□□□□□ -0.08
SNF8-203ENST00000504000 KRT20P35900 424 aa14.53□□□□□ -0.08
SNF8-203ENST00000504000 RPP38P78345 283 aaKnown RBP14.53□□□□□ -0.08
SNF8-203ENST00000504000 ELP6Q0PNE2 266 aa14.53□□□□□ -0.08
SNF8-203ENST00000504000 CSTF3Q12996 717 aaKnown RBP14.53□□□□□ -0.08
SNF8-203ENST00000504000 FRG2Q64ET8 278 aa14.53□□□□□ -0.08
SNF8-203ENST00000504000 OR4F3Q6IEY1 312 aa14.53□□□□□ -0.08
SNF8-203ENST00000504000 PLD3Q8IV08 490 aa14.53□□□□□ -0.08
SNF8-203ENST00000504000 MTFMTQ96DP5 389 aaKnown RBP14.53□□□□□ -0.08
SNF8-203ENST00000504000 C7orf34Q96L11 122 aa14.53□□□□□ -0.08
SNF8-203ENST00000504000 FRG2BQ96QU4 278 aa14.53□□□□□ -0.08
SNF8-203ENST00000504000 PANX1Q96RD7 426 aa14.53□□□□□ -0.08
SNF8-203ENST00000504000 HEPHQ9BQS7 1158 aa14.53□□□□□ -0.08
SNF8-203ENST00000504000 C2orf49Q9BVC5 232 aaPredicted RBP14.53□□□□□ -0.08
SNF8-203ENST00000504000 NXF2Q9GZY0 626 aaKnown RBP14.53□□□□□ -0.08
SNF8-203ENST00000504000 RNF38Q9H0F5 515 aa14.53□□□□□ -0.08
SNF8-203ENST00000504000 THUMPD1Q9NXG2 353 aaKnown RBP14.53□□□□□ -0.08
SNF8-203ENST00000504000 SCHIP1Q9P0W5 487 aaPredicted RBP14.53□□□□□ -0.08
SNF8-203ENST00000504000 KIF17Q9P2E2 1029 aa14.53□□□□□ -0.08
SNF8-203ENST00000504000 CORO2BQ9UQ03 480 aa14.53□□□□□ -0.08
SNF8-203ENST00000504000 PADI2Q9Y2J8 665 aa14.53□□□□□ -0.08
SNF8-203ENST00000504000 SH3BP1Q9Y3L3 701 aa14.53□□□□□ -0.08
SNF8-203ENST00000504000 PCDHGB3Q9Y5G1 929 aa14.53□□□□□ -0.08
SNF8-203ENST00000504000 BACE2Q9Y5Z0 518 aa14.53□□□□□ -0.08
SNF8-203ENST00000504000 MAGEB17A8MXT2 336 aa14.52□□□□□ -0.08
SNF8-203ENST00000504000 FPGTO14772 594 aa14.52□□□□□ -0.08
SNF8-203ENST00000504000 PCDHGA12O60330 932 aa14.52□□□□□ -0.08
SNF8-203ENST00000504000 TBL1XO60907 577 aa14.52□□□□□ -0.08
SNF8-203ENST00000504000 UPK1BO75841 260 aa14.52□□□□□ -0.08
SNF8-203ENST00000504000 CLDN7O95471 211 aa14.52□□□□□ -0.08
SNF8-203ENST00000504000 HIST1H2AGP0C0S8 130 aaPredicted RBP14.52□□□□□ -0.08
SNF8-203ENST00000504000 CYP4B1P13584 511 aa14.52□□□□□ -0.08
SNF8-203ENST00000504000 HIST1H2ADP20671 130 aa14.52□□□□□ -0.08
SNF8-203ENST00000504000 PTX3P26022 381 aaPredicted RBP14.52□□□□□ -0.08
SNF8-203ENST00000504000 AP1S2P56377 157 aa14.52□□□□□ -0.08
SNF8-203ENST00000504000 WNT3P56703 355 aa14.52□□□□□ -0.08
SNF8-203ENST00000504000 CAMK2GQ13555 558 aaPredicted RBP14.52□□□□□ -0.08
SNF8-203ENST00000504000 KCNC3Q14003 757 aa14.52□□□□□ -0.08
SNF8-203ENST00000504000 INAVAQ3KP66 663 aa14.52□□□□□ -0.08
SNF8-203ENST00000504000 ZNF404Q494X3 552 aa14.52□□□□□ -0.08
SNF8-203ENST00000504000 ZDHHC20Q5W0Z9 365 aa14.52□□□□□ -0.08
SNF8-203ENST00000504000 CCDC81Q6ZN84 652 aa14.52□□□□□ -0.08
SNF8-203ENST00000504000 ARMC8Q8IUR7 673 aa14.52□□□□□ -0.08
SNF8-203ENST00000504000 CCDC71Q8IV32 467 aaPredicted RBP14.52□□□□□ -0.08
SNF8-203ENST00000504000 SYNPOQ8N3V7 929 aa14.52□□□□□ -0.08
SNF8-203ENST00000504000 ATG16L2Q8NAA4 619 aa14.52□□□□□ -0.08
SNF8-203ENST00000504000 MCFD2Q8NI22 146 aa14.52□□□□□ -0.08
SNF8-203ENST00000504000 APH1BQ8WW43 257 aa14.52□□□□□ -0.08
SNF8-203ENST00000504000 ASB11Q8WXH4 323 aa14.52□□□□□ -0.08
SNF8-203ENST00000504000 UPF1Q92900 1129 aaKnown RBP eCLIP14.52□□□□□ -0.08
SNF8-203ENST00000504000 APIPQ96GX9 242 aa14.52□□□□□ -0.08
SNF8-203ENST00000504000 HSH2DQ96JZ2 352 aa14.52□□□□□ -0.08
SNF8-203ENST00000504000 HIST1H2AHQ96KK5 128 aa14.52□□□□□ -0.08
SNF8-203ENST00000504000 HIST1H2AJQ99878 128 aa14.52□□□□□ -0.08
SNF8-203ENST00000504000 H2AFJQ9BTM1 129 aa14.52□□□□□ -0.08
SNF8-203ENST00000504000 ALOXE3Q9BYJ1 711 aa14.52□□□□□ -0.08
SNF8-203ENST00000504000 REXO4Q9GZR2 422 aaKnown RBP14.52□□□□□ -0.08
SNF8-203ENST00000504000 FKBP14Q9NWM8 211 aa14.52□□□□□ -0.08
SNF8-203ENST00000504000 KIAA1522Q9P206 1035 aaPredicted RBP14.52□□□□□ -0.08
SNF8-203ENST00000504000 PPIL1Q9Y3C6 166 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms