RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 IL1RAPL2Q9NP60 686 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 ZFP57Q9NU63 452 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 ADPRHL2Q9NX46 363 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 PKD2L2Q9NZM6 624 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 SEPT10Q9P0V9 454 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 MTRRQ9UBK8 725 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 IL16Q14005 1332 aa3.67□□□□□ -1.82
SMC4-225ENST00000497203 TCF20Q9UGU0 1960 aaKnown RBP3.66□□□□□ -1.82
SMC4-225ENST00000497203 A0A0G2JLW4 131 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 LRRD1A4D1F6 860 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 TMEM150CB9EJG8 249 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 KBTBD13C9JR72 458 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 BMPR1BO00238 502 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 FMO6PO60774 539 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 PLGP00747 810 aaPredicted RBP3.66□□□□□ -1.82
SMC4-225ENST00000497203 TSHBP01222 138 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 IGKV3-20P01619 116 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 IGLV2-11P01706 119 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 APOHP02749 345 aaPredicted RBP3.66□□□□□ -1.82
SMC4-225ENST00000497203 EDN1P05305 212 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 UMODP07911 640 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 STAG3L1P0CL83 205 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 IGHV4-31P0DP07 118 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 GP1BBP13224 206 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 EEF2P13639 858 aaKnown RBP3.66□□□□□ -1.82
SMC4-225ENST00000497203 PSMB4P28070 264 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 CETN2P41208 172 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 FRKP42685 505 aaPredicted RBP3.66□□□□□ -1.82
SMC4-225ENST00000497203 ASIC1P78348 528 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 PHEXP78562 749 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 TRAP1Q12931 704 aaKnown RBP3.66□□□□□ -1.82
SMC4-225ENST00000497203 GPR17Q13304 367 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 ZNF674Q2M3X9 581 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 KBTBD12Q3ZCT8 623 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 ZC2HC1CQ53FD0 456 aaPredicted RBP3.66□□□□□ -1.82
SMC4-225ENST00000497203 WDR38Q5JTN6 314 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 CYB5D1Q6P9G0 228 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 TRMT1LQ7Z2T5 733 aaKnown RBP3.66□□□□□ -1.82
SMC4-225ENST00000497203 SIAH3Q8IW03 269 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 CLYBLQ8N0X4 340 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 STPG4Q8N801 248 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 ZNF383Q8NA42 475 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 UXS1Q8NBZ7 420 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 KLHDC9Q8NEP7 349 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 OR13C3Q8NGS6 347 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 NCOA7Q8NI08 942 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 PTP4A1Q93096 173 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 NODALQ96S42 347 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 MAP3K3Q99759 626 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 CDK19Q9BWU1 502 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 LSG1Q9H089 658 aaKnown RBP3.66□□□□□ -1.82
SMC4-225ENST00000497203 FAM49AQ9H0Q0 323 aaPredicted RBP3.66□□□□□ -1.82
SMC4-225ENST00000497203 SDCBP2Q9H190 292 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 MMP28Q9H239 520 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 ZNF334Q9HCZ1 680 aaPredicted RBP3.66□□□□□ -1.82
SMC4-225ENST00000497203 TXLNGQ9NUQ3 528 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 DNAJC17Q9NVM6 304 aaKnown RBP3.66□□□□□ -1.82
SMC4-225ENST00000497203 TMEM161AQ9NX61 479 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 P4HTMQ9NXG6 502 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 SLCO1C1Q9NYB5 712 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 C19orf25Q9UFG5 118 aaPredicted RBP3.66□□□□□ -1.82
SMC4-225ENST00000497203 MAN1B1Q9UKM7 699 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 GRID1Q9ULK0 1009 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 CHKBQ9Y259 395 aa3.66□□□□□ -1.82
SMC4-225ENST00000497203 ILVBLA1L0T0 632 aa3.65□□□□□ -1.83
SMC4-225ENST00000497203 F8VVB4 439 aa3.65□□□□□ -1.83
SMC4-225ENST00000497203 F8VWA3 439 aa3.65□□□□□ -1.83
SMC4-225ENST00000497203 GRID2O43424 1007 aa3.65□□□□□ -1.83
SMC4-225ENST00000497203 PRAF2O60831 178 aa3.65□□□□□ -1.83
SMC4-225ENST00000497203 RAD51DO75771 328 aa3.65□□□□□ -1.83
SMC4-225ENST00000497203 DFFBO76075 338 aa3.65□□□□□ -1.83
SMC4-225ENST00000497203 MOCS2O96007 188 aaPredicted RBP3.65□□□□□ -1.83
SMC4-225ENST00000497203 C8orf89P0DMQ9 161 aa3.65□□□□□ -1.83
SMC4-225ENST00000497203 LBPP18428 481 aa3.65□□□□□ -1.83
SMC4-225ENST00000497203 ITIH1P19827 911 aa3.65□□□□□ -1.83
SMC4-225ENST00000497203 ITGA3P26006 1051 aa3.65□□□□□ -1.83
SMC4-225ENST00000497203 CCND3P30281 292 aaPredicted RBP3.65□□□□□ -1.83
SMC4-225ENST00000497203 CEACAM8P31997 349 aaPredicted RBP3.65□□□□□ -1.83
SMC4-225ENST00000497203 IER3P46695 156 aa3.65□□□□□ -1.83
SMC4-225ENST00000497203 GLIPR1P48060 266 aa3.65□□□□□ -1.83
SMC4-225ENST00000497203 NPBWR1P48145 328 aa3.65□□□□□ -1.83
SMC4-225ENST00000497203 B3GALT5-AS1P59052 145 aa3.65□□□□□ -1.83
SMC4-225ENST00000497203 ST8SIA6P61647 398 aa3.65□□□□□ -1.83
SMC4-225ENST00000497203 KCNJ10P78508 379 aa3.65□□□□□ -1.83
SMC4-225ENST00000497203 IL10RBQ08334 325 aa3.65□□□□□ -1.83
SMC4-225ENST00000497203 RASGEF1BQ0VAM2 473 aa3.65□□□□□ -1.83
SMC4-225ENST00000497203 RCN2Q14257 317 aa3.65□□□□□ -1.83
SMC4-225ENST00000497203 KRTAP24-1Q3LI83 254 aa3.65□□□□□ -1.83
SMC4-225ENST00000497203 CCDC158Q5M9N0 1113 aa3.65□□□□□ -1.83
SMC4-225ENST00000497203 SLC35E4Q6ICL7 350 aa3.65□□□□□ -1.83
SMC4-225ENST00000497203 CTR9Q6PD62 1173 aa3.65□□□□□ -1.83
SMC4-225ENST00000497203 RBMS3Q6XE24 437 aaKnown RBP3.65□□□□□ -1.83
SMC4-225ENST00000497203 MEX3BQ6ZN04 569 aaKnown RBP3.65□□□□□ -1.83
SMC4-225ENST00000497203 G2E3Q7L622 706 aa3.65□□□□□ -1.83
SMC4-225ENST00000497203 SLC26A9Q7LBE3 791 aa3.65□□□□□ -1.83
SMC4-225ENST00000497203 TRPT1Q86TN4 253 aaKnown RBP3.65□□□□□ -1.83
SMC4-225ENST00000497203 CCDC63Q8NA47 563 aa3.65□□□□□ -1.83
SMC4-225ENST00000497203 CENPTQ96BT3 561 aa3.65□□□□□ -1.83
SMC4-225ENST00000497203 GDAP1L1Q96MZ0 367 aa3.65□□□□□ -1.83
SMC4-225ENST00000497203 UHRF2Q96PU4 802 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms