RNA–Protein interactions for RNA: ENST00000495178.1

ATXN1-209, Transcript of ataxin 1, humanhuman

TSL 1 (best)

Gene ATXN1, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1-209ENST00000495178 VPS28Q9UK41 221 aa2.39□□□□□ -2.03
ATXN1-209ENST00000495178 ZNF510Q9Y2H8 683 aa2.39□□□□□ -2.03
ATXN1-209ENST00000495178 TMED3Q9Y3Q3 217 aa2.39□□□□□ -2.03
ATXN1-209ENST00000495178 IGHV4-30-2A0A087WSY4 118 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 FSD2A1L4K1 749 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 SNURFLB1AK76 121 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 KLLNB2CW77 178 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 IGKV3-15P01624 115 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 HOXD4P09016 255 aaPredicted RBP2.38□□□□□ -2.03
ATXN1-209ENST00000495178 IRF2P14316 349 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 MYOGP15173 224 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 ALOX12P18054 663 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 SOX3P41225 446 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 MATR3P43243 847 aaKnown RBP eCLIP2.38□□□□□ -2.035e-7■■■□□ 18.9
ATXN1-209ENST00000495178 OR3A2P47893 321 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 VAMP7P51809 220 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 CLNS1AP54105 237 aaKnown RBP2.38□□□□□ -2.03
ATXN1-209ENST00000495178 HNRNPKP61978 463 aaKnown RBP eCLIP2.38□□□□□ -2.035e-8■■■□□ 17.3
ATXN1-209ENST00000495178 SRSF9Q13242 221 aaKnown RBP eCLIP2.38□□□□□ -2.03
ATXN1-209ENST00000495178 WTAPQ15007 396 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 PTPN14Q15678 1187 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 SNAPC1Q16533 368 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 MCMDC2Q4G0Z9 681 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 CROCCQ5TZA2 2017 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 FAM205BPQ63HN1 556 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 SEL1L3Q68CR1 1132 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 ZER1Q7Z7L7 766 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 HPS6Q86YV9 775 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 LINC00346Q8IVM7 164 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 LGI2Q8N0V4 545 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 TSPAN14Q8NG11 270 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 OR10Q1Q8NGQ4 319 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 CFAP61Q8NHU2 1237 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 ZPLD1Q8TCW7 415 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 NPRL2Q8WTW4 380 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 TMCO6Q96DC7 493 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 ATXN7L3BQ96GX2 97 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 PDLIM5Q96HC4 596 aaKnown RBP2.38□□□□□ -2.03
ATXN1-209ENST00000495178 FAM218AQ96MZ4 157 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 MAP3K3Q99759 626 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 NYXQ9GZU5 481 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 MYNNQ9NPC7 610 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.38□□□□□ -2.036e-12■■■■■ 39
ATXN1-209ENST00000495178 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.38□□□□□ -2.03
ATXN1-209ENST00000495178 PRMT7Q9NVM4 692 aaPredicted RBP2.38□□□□□ -2.03
ATXN1-209ENST00000495178 GPR83Q9NYM4 423 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 TSPAN16Q9UKR8 245 aa2.38□□□□□ -2.03
ATXN1-209ENST00000495178 ARID4BQ4LE39 1312 aaPredicted RBP2.38□□□□□ -2.03
ATXN1-209ENST00000495178 RSF1Q96T23 1441 aaPredicted RBP2.37□□□□□ -2.03
ATXN1-209ENST00000495178 A8MXK9 166 aa2.37□□□□□ -2.03
ATXN1-209ENST00000495178 K7EQD1 137 aa2.37□□□□□ -2.03
ATXN1-209ENST00000495178 PTGESO14684 152 aa2.37□□□□□ -2.03
ATXN1-209ENST00000495178 GJB3O75712 270 aa2.37□□□□□ -2.03
ATXN1-209ENST00000495178 DNASE1P24855 282 aa2.37□□□□□ -2.03
ATXN1-209ENST00000495178 PDHA2P29803 388 aa2.37□□□□□ -2.03
ATXN1-209ENST00000495178 DNA2P51530 1060 aa2.37□□□□□ -2.03
ATXN1-209ENST00000495178 LBX1P52954 281 aa2.37□□□□□ -2.03
ATXN1-209ENST00000495178 MAPK12P53778 367 aa2.37□□□□□ -2.03
ATXN1-209ENST00000495178 ZFP36L1Q07352 338 aaKnown RBP2.37□□□□□ -2.03
ATXN1-209ENST00000495178 SGCGQ13326 291 aa2.37□□□□□ -2.03
ATXN1-209ENST00000495178 TRIM29Q14134 588 aa2.37□□□□□ -2.03
ATXN1-209ENST00000495178 LCLAT1Q6UWP7 414 aa2.37□□□□□ -2.03
ATXN1-209ENST00000495178 C3P1Q6ZMU1 363 aa2.37□□□□□ -2.03
ATXN1-209ENST00000495178 IL17RELQ6ZVW7 336 aa2.37□□□□□ -2.03
ATXN1-209ENST00000495178 FAM131BQ86XD5 332 aa2.37□□□□□ -2.03
ATXN1-209ENST00000495178 ZNF584Q8IVC4 421 aa2.37□□□□□ -2.03
ATXN1-209ENST00000495178 ABCA7Q8IZY2 2146 aa2.37□□□□□ -2.03
ATXN1-209ENST00000495178 OR7A2PQ8NGA2 310 aa2.37□□□□□ -2.03
ATXN1-209ENST00000495178 OR4K1Q8NGD4 311 aa2.37□□□□□ -2.03
ATXN1-209ENST00000495178 CHPT1Q8WUD6 406 aa2.37□□□□□ -2.03
ATXN1-209ENST00000495178 TOMM40LQ969M1 308 aa2.37□□□□□ -2.03
ATXN1-209ENST00000495178 MOB3AQ96BX8 217 aa2.37□□□□□ -2.03
ATXN1-209ENST00000495178 NXNL1Q96CM4 212 aa2.37□□□□□ -2.03
ATXN1-209ENST00000495178 CNRIP1Q96F85 164 aaPredicted RBP2.37□□□□□ -2.03
ATXN1-209ENST00000495178 THOC1Q96FV9 657 aaKnown RBP2.37□□□□□ -2.03
ATXN1-209ENST00000495178 CALML4Q96GE6 196 aa2.37□□□□□ -2.03
ATXN1-209ENST00000495178 RSRC1Q96IZ7 334 aaKnown RBP2.37□□□□□ -2.03
ATXN1-209ENST00000495178 FAM71F1Q96KD3 344 aaPredicted RBP2.37□□□□□ -2.03
ATXN1-209ENST00000495178 NAP1L4Q99733 375 aaKnown RBP2.37□□□□□ -2.03
ATXN1-209ENST00000495178 ANKZF1Q9H8Y5 726 aa2.37□□□□□ -2.03
ATXN1-209ENST00000495178 TBC1D22BQ9NU19 505 aa2.37□□□□□ -2.03
ATXN1-209ENST00000495178 BLOC1S4Q9NUP1 217 aa2.37□□□□□ -2.03
ATXN1-209ENST00000495178 ADD3Q9UEY8 706 aaKnown RBP2.37□□□□□ -2.03
ATXN1-209ENST00000495178 TBC1D29Q9UFV1 150 aa2.37□□□□□ -2.03
ATXN1-209ENST00000495178 DDX25Q9UHL0 483 aaKnown RBP2.37□□□□□ -2.03
ATXN1-209ENST00000495178 PA2G4Q9UQ80 394 aaKnown RBP2.37□□□□□ -2.03
ATXN1-209ENST00000495178 WDR83OSQ9Y284 106 aa2.37□□□□□ -2.03
ATXN1-209ENST00000495178 SELENOKQ9Y6D0 94 aa2.37□□□□□ -2.03
ATXN1-209ENST00000495178 R4GN57 208 aa2.37□□□□□ -2.03
ATXN1-209ENST00000495178 NACADO15069 1562 aa2.36□□□□□ -2.03
ATXN1-209ENST00000495178 hCG_1807616A0A1W2PRN6 198 aa2.36□□□□□ -2.03
ATXN1-209ENST00000495178 NPIPB9F8W1W9 429 aa2.36□□□□□ -2.03
ATXN1-209ENST00000495178 FPGTO14772 594 aa2.36□□□□□ -2.03
ATXN1-209ENST00000495178 SNAP91O60641 907 aa2.36□□□□□ -2.03
ATXN1-209ENST00000495178 ATP1B1P05026 303 aa2.36□□□□□ -2.03
ATXN1-209ENST00000495178 BCL3P20749 454 aa2.36□□□□□ -2.03
ATXN1-209ENST00000495178 ELAVL4P26378 380 aaKnown RBP2.36□□□□□ -2.03
ATXN1-209ENST00000495178 CAPGP40121 348 aa2.36□□□□□ -2.03
ATXN1-209ENST00000495178 ETV5P41161 510 aa2.36□□□□□ -2.03
ATXN1-209ENST00000495178 CLDN15P56746 228 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms