RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 GPR17Q13304 367 aa4□□□□□ -1.77
SMC4-224ENST00000494612 PTK6Q13882 451 aa4□□□□□ -1.77
SMC4-224ENST00000494612 TUBB2AQ13885 445 aa4□□□□□ -1.77
SMC4-224ENST00000494612 PHKG1Q16816 387 aa4□□□□□ -1.77
SMC4-224ENST00000494612 C1QTNF12Q5T7M4 302 aa4□□□□□ -1.77
SMC4-224ENST00000494612 SHEQ5VZ18 495 aa4□□□□□ -1.77
SMC4-224ENST00000494612 C15orf39Q6ZRI6 1047 aa4□□□□□ -1.77
SMC4-224ENST00000494612 NRARPQ7Z6K4 114 aa4□□□□□ -1.77
SMC4-224ENST00000494612 PIGWQ7Z7B1 504 aa4□□□□□ -1.77
SMC4-224ENST00000494612 PIGZQ86VD9 579 aa4□□□□□ -1.77
SMC4-224ENST00000494612 NKAIN3Q8N8D7 197 aa4□□□□□ -1.77
SMC4-224ENST00000494612 OCC1Q8TAD7 63 aa4□□□□□ -1.77
SMC4-224ENST00000494612 TUBB2BQ9BVA1 445 aa4□□□□□ -1.77
SMC4-224ENST00000494612 ZMYND12Q9H0C1 365 aa4□□□□□ -1.77
SMC4-224ENST00000494612 MINDY3Q9H8M7 445 aa4□□□□□ -1.77
SMC4-224ENST00000494612 GSN-AS1Q9NRJ2 163 aa4□□□□□ -1.77
SMC4-224ENST00000494612 SPHK1Q9NYA1 384 aa4□□□□□ -1.77
SMC4-224ENST00000494612 ZNF624Q9P2J8 865 aaPredicted RBP4□□□□□ -1.77
SMC4-224ENST00000494612 C2CD2Q9Y426 696 aa4□□□□□ -1.77
SMC4-224ENST00000494612 R4GN57 208 aa4□□□□□ -1.77
SMC4-224ENST00000494612 A0A0G2JLW4 131 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 A0A1W2PN81 502 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 RPN1P04843 607 aaKnown RBP3.99□□□□□ -1.77
SMC4-224ENST00000494612 VIMP08670 466 aaKnown RBP3.99□□□□□ -1.77
SMC4-224ENST00000494612 IGHV4-31P0DP07 118 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 ADRA2CP18825 462 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 PSMA3P25788 255 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 CHRNB4P30926 498 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 CHRNA7P36544 502 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 RGS7P49802 495 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 VAMP7P51809 220 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 MAZP56270 477 aaKnown RBP3.99□□□□□ -1.77
SMC4-224ENST00000494612 ILF2Q12905 390 aaKnown RBP3.99□□□□□ -1.77
SMC4-224ENST00000494612 TNK1Q13470 666 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 NFE2L1Q14494 772 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 P2RY6Q15077 328 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 TAZQ16635 292 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 PTGISQ16647 500 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 KIAA1644Q3SXP7 199 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 C20orf194Q5TEA3 1177 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 OR4A47Q6IF82 309 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 CYB5D1Q6P9G0 228 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 CTR9Q6PD62 1173 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 DZIP1Q86YF9 867 aaKnown RBP3.99□□□□□ -1.77
SMC4-224ENST00000494612 CROCCP3Q8IVE0 287 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 RYBPQ8N488 228 aaPredicted RBP3.99□□□□□ -1.77
SMC4-224ENST00000494612 RASGEF1AQ8N9B8 481 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 OR13C3Q8NGS6 347 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 OR52N5Q8NH56 324 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 MR1Q95460 341 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 PYCR2Q96C36 320 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 PRAC1Q96KF2 57 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 PGLYRP2Q96PD5 576 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 FSD1Q9BTV5 496 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 TRPV4Q9HBA0 871 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 RASAL2Q9UJF2 1139 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 GMEB2Q9UKD1 530 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 CHKBQ9Y259 395 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 TRIM17Q9Y577 477 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 HEG1Q9ULI3 1381 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 TOP2BQ02880 1626 aa3.99□□□□□ -1.77
SMC4-224ENST00000494612 PPRC1Q5VV67 1664 aaKnown RBP3.98□□□□□ -1.77
SMC4-224ENST00000494612 PRR23AA6NEV1 266 aa3.98□□□□□ -1.77
SMC4-224ENST00000494612 H0YAE9 185 aa3.98□□□□□ -1.77
SMC4-224ENST00000494612 CCDC188H7C350 402 aa3.98□□□□□ -1.77
SMC4-224ENST00000494612 ST8SIA3O43173 380 aa3.98□□□□□ -1.77
SMC4-224ENST00000494612 PPIP5K2O43314 1243 aa3.98□□□□□ -1.77
SMC4-224ENST00000494612 LUC7L3O95232 432 aaKnown RBP3.98□□□□□ -1.77
SMC4-224ENST00000494612 PGLSO95336 258 aa3.98□□□□□ -1.77
SMC4-224ENST00000494612 AMBPP02760 352 aa3.98□□□□□ -1.77
SMC4-224ENST00000494612 HSP90AB1P08238 724 aaKnown RBP3.98□□□□□ -1.77
SMC4-224ENST00000494612 ERVK-10P10266 1014 aa3.98□□□□□ -1.77
SMC4-224ENST00000494612 SPP1P10451 314 aa3.98□□□□□ -1.77
SMC4-224ENST00000494612 CA6P23280 308 aa3.98□□□□□ -1.77
SMC4-224ENST00000494612 GMPSP49915 693 aaPredicted RBP3.98□□□□□ -1.77
SMC4-224ENST00000494612 KCNJ10P78508 379 aa3.98□□□□□ -1.77
SMC4-224ENST00000494612 SCN1BQ07699 218 aa3.98□□□□□ -1.77
SMC4-224ENST00000494612 UGCGQ16739 394 aa3.98□□□□□ -1.77
SMC4-224ENST00000494612 NHSL2Q5HYW2 709 aa3.98□□□□□ -1.77
SMC4-224ENST00000494612 SLC35D3Q5M8T2 416 aa3.98□□□□□ -1.77
SMC4-224ENST00000494612 ZNF449Q6P9G9 518 aa3.98□□□□□ -1.77
SMC4-224ENST00000494612 KLHDC8BQ8IXV7 354 aa3.98□□□□□ -1.77
SMC4-224ENST00000494612 NDUFAF2Q8N183 169 aa3.98□□□□□ -1.77
SMC4-224ENST00000494612 TMEM178AQ8NBL3 297 aa3.98□□□□□ -1.77
SMC4-224ENST00000494612 UXS1Q8NBZ7 420 aa3.98□□□□□ -1.77
SMC4-224ENST00000494612 NOA1Q8NC60 698 aaKnown RBP3.98□□□□□ -1.77
SMC4-224ENST00000494612 GRAPLQ8TC17 118 aaPredicted RBP3.98□□□□□ -1.77
SMC4-224ENST00000494612 HPSE2Q8WWQ2 592 aa3.98□□□□□ -1.77
SMC4-224ENST00000494612 RAD54LQ92698 747 aa3.98□□□□□ -1.77
SMC4-224ENST00000494612 CORO2AQ92828 525 aa3.98□□□□□ -1.77
SMC4-224ENST00000494612 WBP2Q969T9 261 aa3.98□□□□□ -1.77
SMC4-224ENST00000494612 PIGQQ9BRB3 760 aa3.98□□□□□ -1.77
SMC4-224ENST00000494612 INPP5KQ9BT40 448 aa3.98□□□□□ -1.77
SMC4-224ENST00000494612 RIMS4Q9H426 269 aaPredicted RBP3.98□□□□□ -1.77
SMC4-224ENST00000494612 PHPT1Q9NRX4 125 aaPredicted RBP3.98□□□□□ -1.77
SMC4-224ENST00000494612 DDX43Q9NXZ2 648 aaKnown RBP3.98□□□□□ -1.77
SMC4-224ENST00000494612 ARMCX3Q9UH62 379 aaPredicted RBP3.98□□□□□ -1.77
SMC4-224ENST00000494612 NOL7Q9UMY1 257 aaKnown RBP3.98□□□□□ -1.77
SMC4-224ENST00000494612 BIVM-ERCC5R4GMW8 1640 aa3.98□□□□□ -1.77
SMC4-224ENST00000494612 PLB1Q6P1J6 1458 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms