RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 GPR156Q8NFN8 814 aa11.28□□□□□ -0.6
BRCA1-222ENST00000493919 TSTD1Q8NFU3 115 aa11.28□□□□□ -0.6
BRCA1-222ENST00000493919 JADE3Q92613 823 aa11.28□□□□□ -0.6
BRCA1-222ENST00000493919 PTERQ96BW5 349 aa11.28□□□□□ -0.6
BRCA1-222ENST00000493919 PGM2Q96G03 612 aa11.28□□□□□ -0.6
BRCA1-222ENST00000493919 LMLNQ96KR4 655 aa11.28□□□□□ -0.6
BRCA1-222ENST00000493919 RPL10LQ96L21 214 aaKnown RBP11.28□□□□□ -0.6
BRCA1-222ENST00000493919 FAM111AQ96PZ2 611 aa11.28□□□□□ -0.6
BRCA1-222ENST00000493919 LMF1Q96S06 567 aa11.28□□□□□ -0.6
BRCA1-222ENST00000493919 FEM1AQ9BSK4 669 aa11.28□□□□□ -0.6
BRCA1-222ENST00000493919 SPON2Q9BUD6 331 aa11.28□□□□□ -0.6
BRCA1-222ENST00000493919 ALX4Q9H161 411 aaPredicted RBP11.28□□□□□ -0.6
BRCA1-222ENST00000493919 OR51V1Q9H2C8 321 aa11.28□□□□□ -0.6
BRCA1-222ENST00000493919 B3GNT2Q9NY97 397 aa11.28□□□□□ -0.6
BRCA1-222ENST00000493919 MAT2BQ9NZL9 334 aa11.28□□□□□ -0.6
BRCA1-222ENST00000493919 THAP10Q9P2Z0 257 aaPredicted RBP11.28□□□□□ -0.6
BRCA1-222ENST00000493919 SLC25A13Q9UJS0 675 aa11.28□□□□□ -0.6
BRCA1-222ENST00000493919 TCRBV21S2A2A0A5A6 115 aa11.27□□□□□ -0.6
BRCA1-222ENST00000493919 A8MXE2 369 aa11.27□□□□□ -0.6
BRCA1-222ENST00000493919 CBX4O00257 560 aa11.27□□□□□ -0.6
BRCA1-222ENST00000493919 NADKO95544 446 aaPredicted RBP11.27□□□□□ -0.6
BRCA1-222ENST00000493919 ATP1A1P05023 1023 aaKnown RBP11.27□□□□□ -0.6
BRCA1-222ENST00000493919 EPHX1P07099 455 aa11.27□□□□□ -0.6
BRCA1-222ENST00000493919 PROS1P07225 676 aa11.27□□□□□ -0.6
BRCA1-222ENST00000493919 GNAO1P09471 354 aa11.27□□□□□ -0.6
BRCA1-222ENST00000493919 RNF224P0DH78 156 aa11.27□□□□□ -0.6
BRCA1-222ENST00000493919 COMTP21964 271 aa11.27□□□□□ -0.6
BRCA1-222ENST00000493919 TGM1P22735 817 aa11.27□□□□□ -0.6
BRCA1-222ENST00000493919 PRKCHP24723 683 aa11.27□□□□□ -0.6
BRCA1-222ENST00000493919 AP1S1P61966 158 aa11.27□□□□□ -0.6
BRCA1-222ENST00000493919 GNA12Q03113 381 aa11.27□□□□□ -0.6
BRCA1-222ENST00000493919 STARD3Q14849 445 aa11.27□□□□□ -0.6
BRCA1-222ENST00000493919 PTPRNQ16849 979 aa11.27□□□□□ -0.6
BRCA1-222ENST00000493919 HSF5Q4G112 596 aaPredicted RBP11.27□□□□□ -0.6
BRCA1-222ENST00000493919 IGF2-ASQ6U949 168 aa11.27□□□□□ -0.6
BRCA1-222ENST00000493919 GPR180Q86V85 440 aa11.27□□□□□ -0.6
BRCA1-222ENST00000493919 NAGSQ8N159 534 aa11.27□□□□□ -0.6
BRCA1-222ENST00000493919 PDIK1LQ8N165 341 aa11.27□□□□□ -0.6
BRCA1-222ENST00000493919 GLIS1Q8NBF1 620 aa11.27□□□□□ -0.6
BRCA1-222ENST00000493919 HIPK4Q8NE63 616 aa11.27□□□□□ -0.6
BRCA1-222ENST00000493919 PRSS33Q8NF86 280 aa11.27□□□□□ -0.6
BRCA1-222ENST00000493919 TMEM246Q9BRR3 403 aa11.27□□□□□ -0.6
BRCA1-222ENST00000493919 SLC25A23Q9BV35 468 aa11.27□□□□□ -0.6
BRCA1-222ENST00000493919 PRMT8Q9NR22 394 aaPredicted RBP11.27□□□□□ -0.6
BRCA1-222ENST00000493919 GRHPRQ9UBQ7 328 aa11.27□□□□□ -0.6
BRCA1-222ENST00000493919 RGSL1A5PLK6 1076 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 PJA2O43164 708 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 SNAP91O60641 907 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 PPM1BO75688 479 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 CDK1P06493 297 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 CD63P08962 238 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 HNRNPLP14866 589 aaKnown RBP eCLIP11.27□□□□□ -0.61
BRCA1-222ENST00000493919 ERCC2P18074 760 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 KRT15P19012 456 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 COL9A1P20849 921 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 GLDCP23378 1020 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 HMGCLP35914 325 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 HSD17B3P37058 310 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 CCT3P49368 545 aaKnown RBP11.27□□□□□ -0.61
BRCA1-222ENST00000493919 SERPINB9P50453 376 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 TAS2R60P59551 318 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 TUSC1Q2TAM9 212 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 ELP2Q6IA86 826 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 TMEM92Q6UXU6 159 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 LINGO4Q6UY18 593 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 TPRA1Q86W33 373 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 MAML2Q8IZL2 1156 aaPredicted RBP11.27□□□□□ -0.61
BRCA1-222ENST00000493919 CADM2Q8N3J6 435 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 DCAF4L2Q8NA75 395 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 NETO2Q8NC67 525 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 KCTD6Q8NC69 237 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 OR5T2Q8NGG2 359 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 HMGB4Q8WW32 186 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 METTL21AQ8WXB1 218 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 CELF6Q96J87 481 aaKnown RBP11.27□□□□□ -0.61
BRCA1-222ENST00000493919 TMEM120AQ9BXJ8 343 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 GSN-AS1Q9NRJ2 163 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 RAPGEFL1Q9UHV5 662 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 PLCL2Q9UPR0 1127 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 ERVW-1Q9UQF0 538 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 VPS9D1Q9Y2B5 631 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 ANKRD6Q9Y2G4 727 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 AUP1Q9Y679 476 aa11.27□□□□□ -0.61
BRCA1-222ENST00000493919 TRBV23OR9-2A0A075B6M9 112 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 A0A1B0GVC2 190 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 LEUTXA8MZ59 168 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 H3BMM5 538 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 NPC1O15118 1278 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 BUD23O43709 281 aaKnown RBP11.26□□□□□ -0.61
BRCA1-222ENST00000493919 STSP08842 583 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 SMIM6P0DI80 62 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 ACVRL1P37023 503 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 NNMTP40261 264 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 PAFAH1B1P43034 410 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 BMXP51813 675 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 SUCLG1P53597 346 aaKnown RBP11.26□□□□□ -0.61
BRCA1-222ENST00000493919 TAP2Q03519 686 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 LIPEQ05469 1076 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 MMRN1Q13201 1228 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 POLD3Q15054 466 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms