RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 PSMD11O00231 422 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 ATG13O75143 517 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 KCNH1O95259 989 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 BMP10O95393 424 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 NFATC1O95644 943 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 GPIP06744 558 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 RPS9P46781 194 aaKnown RBP13.36□□□□□ -0.27
VCP-207ENST00000493886 TMEM115Q12893 351 aaPredicted RBP13.36□□□□□ -0.27
VCP-207ENST00000493886 AASDHQ4L235 1098 aaPredicted RBP13.36□□□□□ -0.27
VCP-207ENST00000493886 FNDC3BQ53EP0 1204 aaKnown RBP13.36□□□□□ -0.27
VCP-207ENST00000493886 USP39Q53GS9 565 aaKnown RBP13.36□□□□□ -0.27
VCP-207ENST00000493886 FAM109BQ6ICB4 259 aaPredicted RBP13.36□□□□□ -0.27
VCP-207ENST00000493886 C11orf96Q7Z7L8 435 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 NPAS3Q8IXF0 933 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 DHRSXQ8N5I4 330 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 KRTCAP2Q8N6L1 136 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 TMEM159Q96B96 161 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 SMPD3Q9NY59 655 aaPredicted RBP13.36□□□□□ -0.27
VCP-207ENST00000493886 NOX1Q9Y5S8 564 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 TCRBV5S2A0A599 114 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 ARHGEF33A8MVX0 844 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 PRAMEF4O60810 478 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 PSIP1O75475 530 aaKnown RBP13.36□□□□□ -0.27
VCP-207ENST00000493886 RASAL1O95294 804 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 BCKDHAP12694 445 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 CD247P20963 164 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 HRH2P25021 359 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 MAP4P27816 1152 aaKnown RBP13.36□□□□□ -0.27
VCP-207ENST00000493886 PRLHRP49683 370 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 IST1P53990 364 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 PFN3P60673 137 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 TUBA4AP68366 448 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 RAB39AQ14964 217 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 GAB4Q2WGN9 574 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 CYBRD1Q53TN4 286 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 SPANXN4Q5MJ08 99 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 TMTC4Q5T4D3 741 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 PRAMEF9Q5VWM5 478 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 LILRA3Q8N6C8 439 aaPredicted RBP13.36□□□□□ -0.27
VCP-207ENST00000493886 ST13P5Q8NFI4 369 aaPredicted RBP13.36□□□□□ -0.27
VCP-207ENST00000493886 BIRC7Q96CA5 298 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 DTD2Q96FN9 168 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 ASB16Q96NS5 453 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 CHID1Q9BWS9 393 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 CLMPQ9H6B4 373 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 DEC1Q9P2X7 70 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 COQ6Q9Y2Z9 468 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 NEUROG3Q9Y4Z2 214 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 SPINT1O43278 529 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 LDLRP01130 860 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 IL6P05231 212 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 PREPP48147 710 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 KCTD21Q4G0X4 260 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.36□□□□□ -0.27
VCP-207ENST00000493886 FGD3Q5JSP0 725 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 C9orf64Q5T6V5 341 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 TMEM220Q6QAJ8 160 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 KCTD8Q6ZWB6 473 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 GPR180Q86V85 440 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 TNIP2Q8NFZ5 429 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 CLHC1Q8NHS4 586 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 SGCDQ92629 289 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 GTF2H4Q92759 462 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 GLMNQ92990 594 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 ARRDC3Q96B67 414 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 COQ10AQ96MF6 247 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 CCM2Q9BSQ5 444 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 NPLQ9BXD5 320 aaPredicted RBP13.36□□□□□ -0.27
VCP-207ENST00000493886 VAPAQ9P0L0 249 aa13.36□□□□□ -0.27
VCP-207ENST00000493886 TCF20Q9UGU0 1960 aaKnown RBP13.36□□□□□ -0.27
VCP-207ENST00000493886 PGRP06401 933 aa13.35□□□□□ -0.27
VCP-207ENST00000493886 UBL4AP11441 157 aa13.35□□□□□ -0.27
VCP-207ENST00000493886 ITGB7P26010 798 aa13.35□□□□□ -0.27
VCP-207ENST00000493886 CHIT1Q13231 466 aa13.35□□□□□ -0.27
VCP-207ENST00000493886 KCNC3Q14003 757 aa13.35□□□□□ -0.27
VCP-207ENST00000493886 MAPKAPK3Q16644 382 aa13.35□□□□□ -0.27
VCP-207ENST00000493886 HNRNPA1L2Q32P51 320 aaKnown RBP13.35□□□□□ -0.27
VCP-207ENST00000493886 XKR5Q6UX68 686 aa13.35□□□□□ -0.27
VCP-207ENST00000493886 PROSER1Q86XN7 944 aa13.35□□□□□ -0.27
VCP-207ENST00000493886 VN1R2Q8NFZ6 395 aa13.35□□□□□ -0.27
VCP-207ENST00000493886 OR8J3Q8NGG0 315 aa13.35□□□□□ -0.27
VCP-207ENST00000493886 OR8D1Q8WZ84 308 aa13.35□□□□□ -0.27
VCP-207ENST00000493886 SMARCD2Q92925 531 aa13.35□□□□□ -0.27
VCP-207ENST00000493886 DLGAP4Q9Y2H0 992 aa13.35□□□□□ -0.27
VCP-207ENST00000493886 PCDHB3Q9Y5E6 796 aa13.35□□□□□ -0.27
VCP-207ENST00000493886 EDDM13A0A1B0GTR0 161 aa13.35□□□□□ -0.27
VCP-207ENST00000493886 SLC5A10A0PJK1 596 aa13.35□□□□□ -0.27
VCP-207ENST00000493886 H0Y858 1186 aa13.35□□□□□ -0.27
VCP-207ENST00000493886 DFNA5O60443 496 aa13.35□□□□□ -0.27
VCP-207ENST00000493886 CAPGP40121 348 aa13.35□□□□□ -0.27
VCP-207ENST00000493886 CCR3P51677 355 aa13.35□□□□□ -0.27
VCP-207ENST00000493886 RPS14P62263 151 aaKnown RBP13.35□□□□□ -0.27
VCP-207ENST00000493886 ZBED5Q49AG3 693 aa13.35□□□□□ -0.27
VCP-207ENST00000493886 ABRAXAS1Q6UWZ7 409 aa13.35□□□□□ -0.27
VCP-207ENST00000493886 FAM86B1Q8N7N1 296 aa13.35□□□□□ -0.27
VCP-207ENST00000493886 TMIEQ8NEW7 156 aa13.35□□□□□ -0.27
VCP-207ENST00000493886 SUN5Q8TC36 379 aa13.35□□□□□ -0.27
VCP-207ENST00000493886 FOXJ1Q92949 421 aa13.35□□□□□ -0.27
VCP-207ENST00000493886 KANSL1LA0AUZ9 987 aa13.34□□□□□ -0.27
VCP-207ENST00000493886 HEPACAM2A8MVW5 462 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms