RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 PRMT3O60678 531 aa13.57□□□□□ -0.24
PTPN7-216ENST00000492977 CEACAM5P06731 702 aa13.57□□□□□ -0.24
PTPN7-216ENST00000492977 SLC35G4P0C7Q5 338 aa13.57□□□□□ -0.24
PTPN7-216ENST00000492977 ERGP11308 486 aa13.57□□□□□ -0.24
PTPN7-216ENST00000492977 SDC1P18827 310 aa13.57□□□□□ -0.24
PTPN7-216ENST00000492977 ATXN3P54252 364 aaPredicted RBP13.57□□□□□ -0.24
PTPN7-216ENST00000492977 SMAD4Q13485 552 aaKnown RBP13.57□□□□□ -0.24
PTPN7-216ENST00000492977 SPANXN4Q5MJ08 99 aa13.57□□□□□ -0.24
PTPN7-216ENST00000492977 CAPRIN2Q6IMN6 1127 aaKnown RBP13.57□□□□□ -0.24
PTPN7-216ENST00000492977 TMPRSS11BQ86T26 416 aa13.57□□□□□ -0.24
PTPN7-216ENST00000492977 PTRH1Q86Y79 214 aaKnown RBP13.57□□□□□ -0.24
PTPN7-216ENST00000492977 LAS2Q8IYD9 372 aa13.57□□□□□ -0.24
PTPN7-216ENST00000492977 TBC1D21Q8IYX1 336 aa13.57□□□□□ -0.24
PTPN7-216ENST00000492977 KRTCAP2Q8N6L1 136 aa13.57□□□□□ -0.24
PTPN7-216ENST00000492977 OR8J3Q8NGG0 315 aa13.57□□□□□ -0.24
PTPN7-216ENST00000492977 SLC5A11Q8WWX8 675 aa13.57□□□□□ -0.24
PTPN7-216ENST00000492977 GTF2H4Q92759 462 aa13.57□□□□□ -0.24
PTPN7-216ENST00000492977 SCARF2Q96GP6 870 aaPredicted RBP13.57□□□□□ -0.24
PTPN7-216ENST00000492977 MRGPRX1Q96LB2 322 aa13.57□□□□□ -0.24
PTPN7-216ENST00000492977 APOLD1Q96LR9 279 aa13.57□□□□□ -0.24
PTPN7-216ENST00000492977 ZNF570Q96NI8 536 aa13.57□□□□□ -0.24
PTPN7-216ENST00000492977 ZNF184Q99676 751 aaPredicted RBP13.57□□□□□ -0.24
PTPN7-216ENST00000492977 BTBD1Q9H0C5 482 aa13.57□□□□□ -0.24
PTPN7-216ENST00000492977 TRIT1Q9H3H1 467 aaKnown RBP13.57□□□□□ -0.24
PTPN7-216ENST00000492977 ALG2Q9H553 416 aa13.57□□□□□ -0.24
PTPN7-216ENST00000492977 SPATA7Q9P0W8 599 aa13.57□□□□□ -0.24
PTPN7-216ENST00000492977 BRWD1Q9NSI6 2320 aa13.57□□□□□ -0.24
PTPN7-216ENST00000492977 REV3LO60673 3130 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 KANSL1LA0AUZ9 987 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 AQP12BA6NM10 295 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 MYO1DO94832 1006 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 FUCA1P04066 466 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 PCNAP12004 261 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 PRPS1L1P21108 318 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 SLC7A1P30825 629 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 S100A3P33764 101 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 GSK3BP49841 420 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 CLCNKAP51800 687 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 LIPEQ05469 1076 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 ACSM2AQ08AH3 577 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 TSTA3Q13630 321 aaPredicted RBP13.56□□□□□ -0.24
PTPN7-216ENST00000492977 CYP2A13Q16696 494 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 DPY19L1Q2PZI1 675 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 RABL3Q5HYI8 236 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 ACSM2BQ68CK6 577 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 LCN8Q6JVE9 175 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 TLDC1Q6P9B6 456 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 NXPE4Q6UWF7 544 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 MSANTD1Q6ZTZ1 278 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 CHST15Q7LFX5 561 aaPredicted RBP13.56□□□□□ -0.24
PTPN7-216ENST00000492977 AQP12AQ8IXF9 295 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 OR2T34Q8NGX1 318 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 RPLP0P6Q8NHW5 317 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 HUS1BQ8NHY5 278 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 UBE2E3Q969T4 207 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 C11orf24Q96F05 449 aaPredicted RBP13.56□□□□□ -0.24
PTPN7-216ENST00000492977 OR52E6Q96RD3 313 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 KLHL4Q9C0H6 718 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 PCBD2Q9H0N5 130 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 GEMIN8Q9NWZ8 242 aaKnown RBP13.56□□□□□ -0.24
PTPN7-216ENST00000492977 MAPRE3Q9UPY8 281 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 AP3M1Q9Y2T2 418 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 TDRKHQ9Y2W6 561 aaKnown RBP13.56□□□□□ -0.24
PTPN7-216ENST00000492977 TSC22D4Q9Y3Q8 395 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 AP4S1Q9Y587 144 aa13.56□□□□□ -0.24
PTPN7-216ENST00000492977 MAGEB17A8MXT2 336 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 SLC31A1O15431 190 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 MBTPS2O43462 519 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 ACP5P13686 325 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 TACR1P25103 407 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 HTR1EP28566 365 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 MAT2AP31153 395 aaKnown RBP13.55□□□□□ -0.24
PTPN7-216ENST00000492977 C21orf58P58505 322 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 KIAA1024LP59773 190 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 YBX1P67809 324 aaKnown RBP13.55□□□□□ -0.24
PTPN7-216ENST00000492977 CTBSQ01459 385 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 DDX39BQ13838 428 aaKnown RBP13.55□□□□□ -0.24
PTPN7-216ENST00000492977 SLBPQ14493 270 aaKnown RBP eCLIP13.55□□□□□ -0.24
PTPN7-216ENST00000492977 TRIP10Q15642 601 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 AASDHQ4L235 1098 aaPredicted RBP13.55□□□□□ -0.24
PTPN7-216ENST00000492977 PYCR3Q53H96 274 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 SPIN4Q56A73 249 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 PRAMEF14Q5SWL7 426 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 CATSPEREQ5SY80 951 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 OGFRL1Q5TC84 451 aaPredicted RBP13.55□□□□□ -0.24
PTPN7-216ENST00000492977 THEMIS2Q5TEJ8 643 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 PRAMEF13Q5VWM6 474 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 CYP2R1Q6VVX0 501 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 LPCAT2Q7L5N7 544 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 TRIM69Q86WT6 500 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 RIMKLAQ8IXN7 391 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 RNF175Q8N4F7 328 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 DENND6BQ8NEG7 585 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 CLHC1Q8NHS4 586 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 NUDT8Q8WV74 236 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 CHTF18Q8WVB6 975 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 STARD8Q92502 1023 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 FAM3CQ92520 227 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 PPM1MQ96MI6 270 aa13.55□□□□□ -0.24
PTPN7-216ENST00000492977 TMEM74Q96NL1 305 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms