RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 SEC31AO94979 1220 aaKnown RBP22.61■■□□□ 1.21
CTDSP1-211ENST00000492545 UMODP07911 640 aa22.61■■□□□ 1.21
CTDSP1-211ENST00000492545 MMP11P24347 488 aa22.61■■□□□ 1.21
CTDSP1-211ENST00000492545 GABRB3P28472 473 aa22.61■■□□□ 1.21
CTDSP1-211ENST00000492545 SOX8P57073 446 aa22.61■■□□□ 1.21
CTDSP1-211ENST00000492545 CBLBQ13191 982 aa22.61■■□□□ 1.21
CTDSP1-211ENST00000492545 TSTA3Q13630 321 aaPredicted RBP22.61■■□□□ 1.21
CTDSP1-211ENST00000492545 NKG7Q16617 165 aa22.61■■□□□ 1.21
CTDSP1-211ENST00000492545 PRTGQ2VWP7 1150 aa22.61■■□□□ 1.21
CTDSP1-211ENST00000492545 TEDDM1Q5T9Z0 273 aa22.61■■□□□ 1.21
CTDSP1-211ENST00000492545 GARNL3Q5VVW2 1013 aa22.61■■□□□ 1.21
CTDSP1-211ENST00000492545 STEAP4Q687X5 459 aa22.61■■□□□ 1.21
CTDSP1-211ENST00000492545 PIWIL4Q7Z3Z4 852 aaKnown RBP22.61■■□□□ 1.21
CTDSP1-211ENST00000492545 OR4N4Q8N0Y3 316 aa22.61■■□□□ 1.21
CTDSP1-211ENST00000492545 BBOF1Q8ND07 529 aa22.61■■□□□ 1.21
CTDSP1-211ENST00000492545 MVB12AQ96EY5 273 aa22.61■■□□□ 1.21
CTDSP1-211ENST00000492545 NDNQ99608 321 aa22.61■■□□□ 1.21
CTDSP1-211ENST00000492545 PARVBQ9HBI1 364 aa22.61■■□□□ 1.21
CTDSP1-211ENST00000492545 C5AR2Q9P296 337 aa22.61■■□□□ 1.21
CTDSP1-211ENST00000492545 PCM1Q15154 2024 aa22.6■■□□□ 1.21
CTDSP1-211ENST00000492545 H0YGG7 62 aa22.6■■□□□ 1.21
CTDSP1-211ENST00000492545 TTI1O43156 1089 aa22.6■■□□□ 1.21
CTDSP1-211ENST00000492545 DPM1O60762 260 aa22.6■■□□□ 1.21
CTDSP1-211ENST00000492545 BANF1O75531 89 aa22.6■■□□□ 1.21
CTDSP1-211ENST00000492545 EIF2S1P05198 315 aaKnown RBP22.6■■□□□ 1.21
CTDSP1-211ENST00000492545 ITGA8P53708 1063 aa22.6■■□□□ 1.21
CTDSP1-211ENST00000492545 ARF3P61204 181 aaPredicted RBP22.6■■□□□ 1.21
CTDSP1-211ENST00000492545 TIAL1Q01085 375 aaKnown RBP eCLIP22.6■■□□□ 1.21
CTDSP1-211ENST00000492545 THEMIS2Q5TEJ8 643 aa22.6■■□□□ 1.21
CTDSP1-211ENST00000492545 PPP1R32Q7Z5V6 425 aa22.6■■□□□ 1.21
CTDSP1-211ENST00000492545 LRRC56Q8IYG6 542 aaPredicted RBP22.6■■□□□ 1.21
CTDSP1-211ENST00000492545 MYO1HQ8N1T3 1032 aa22.6■■□□□ 1.21
CTDSP1-211ENST00000492545 EEF1AKMT1Q8WVE0 214 aa22.6■■□□□ 1.21
CTDSP1-211ENST00000492545 RERGQ96A58 199 aaPredicted RBP22.6■■□□□ 1.21
CTDSP1-211ENST00000492545 SMAD5Q99717 465 aaKnown RBP22.6■■□□□ 1.21
CTDSP1-211ENST00000492545 ZNF304Q9HCX3 659 aa22.6■■□□□ 1.21
CTDSP1-211ENST00000492545 ANKRD12Q6UB98 2062 aa22.6■■□□□ 1.21
CTDSP1-211ENST00000492545 IGKV1-8A0A0C4DH67 115 aa22.59■■□□□ 1.21
CTDSP1-211ENST00000492545 A6NL46 340 aa22.59■■□□□ 1.21
CTDSP1-211ENST00000492545 VSTM2BA6NLU5 285 aa22.59■■□□□ 1.21
CTDSP1-211ENST00000492545 AGPSO00116 658 aa22.59■■□□□ 1.21
CTDSP1-211ENST00000492545 ZIC2O95409 532 aaPredicted RBP22.59■■□□□ 1.21
CTDSP1-211ENST00000492545 ALPPP05187 535 aa22.59■■□□□ 1.21
CTDSP1-211ENST00000492545 HIST1H2AGP0C0S8 130 aaPredicted RBP22.59■■□□□ 1.21
CTDSP1-211ENST00000492545 HIST1H2ADP20671 130 aa22.59■■□□□ 1.21
CTDSP1-211ENST00000492545 IMPA1P29218 277 aa22.59■■□□□ 1.21
CTDSP1-211ENST00000492545 OR1D4P47884 311 aa22.59■■□□□ 1.21
CTDSP1-211ENST00000492545 IL2P60568 153 aa22.59■■□□□ 1.21
CTDSP1-211ENST00000492545 YBX1P67809 324 aaKnown RBP22.59■■□□□ 1.21
CTDSP1-211ENST00000492545 ILF2Q12905 390 aaKnown RBP22.59■■□□□ 1.21
CTDSP1-211ENST00000492545 VWA5B1Q5TIE3 1220 aa22.59■■□□□ 1.21
CTDSP1-211ENST00000492545 PAQR3Q6TCH7 311 aa22.59■■□□□ 1.21
CTDSP1-211ENST00000492545 COX15Q7KZN9 410 aa22.59■■□□□ 1.21
CTDSP1-211ENST00000492545 CSNK1A1LQ8N752 337 aa22.59■■□□□ 1.21
CTDSP1-211ENST00000492545 HIST1H2AHQ96KK5 128 aa22.59■■□□□ 1.21
CTDSP1-211ENST00000492545 OR2A5Q96R48 311 aa22.59■■□□□ 1.21
CTDSP1-211ENST00000492545 SPSB2Q99619 263 aa22.59■■□□□ 1.21
CTDSP1-211ENST00000492545 HIST1H2AJQ99878 128 aa22.59■■□□□ 1.21
CTDSP1-211ENST00000492545 H2AFJQ9BTM1 129 aa22.59■■□□□ 1.21
CTDSP1-211ENST00000492545 PLAC1Q9HBJ0 212 aa22.59■■□□□ 1.21
CTDSP1-211ENST00000492545 ATP13A2Q9NQ11 1180 aa22.59■■□□□ 1.21
CTDSP1-211ENST00000492545 CCDC177Q9NQR7 707 aaPredicted RBP22.59■■□□□ 1.21
CTDSP1-211ENST00000492545 SEMA3GQ9NS98 782 aa22.59■■□□□ 1.21
CTDSP1-211ENST00000492545 CHMP2BQ9UQN3 213 aa22.59■■□□□ 1.21
CTDSP1-211ENST00000492545 VWA7Q9Y334 891 aa22.59■■□□□ 1.21
CTDSP1-211ENST00000492545 EFCAB8A8MWE9 144 aa22.58■■□□□ 1.21
CTDSP1-211ENST00000492545 PRPF4O43172 522 aaKnown RBP eCLIP22.58■■□□□ 1.213e-7■■■■□ 24.7
CTDSP1-211ENST00000492545 IPO13O94829 963 aaKnown RBP22.58■■□□□ 1.21
CTDSP1-211ENST00000492545 CCND1P24385 295 aa22.58■■□□□ 1.21
CTDSP1-211ENST00000492545 CDKN2DP55273 166 aa22.58■■□□□ 1.21
CTDSP1-211ENST00000492545 OCA2Q04671 838 aa22.58■■□□□ 1.21
CTDSP1-211ENST00000492545 MYBPC3Q14896 1274 aa22.58■■□□□ 1.21
CTDSP1-211ENST00000492545 GALNT16Q8N428 558 aa22.58■■□□□ 1.21
CTDSP1-211ENST00000492545 PPFIBP2Q8ND30 876 aa22.58■■□□□ 1.21
CTDSP1-211ENST00000492545 COL26A1Q96A83 441 aa22.58■■□□□ 1.21
CTDSP1-211ENST00000492545 CFAP36Q96G28 342 aa22.58■■□□□ 1.21
CTDSP1-211ENST00000492545 CABS1Q96KC9 395 aa22.58■■□□□ 1.21
CTDSP1-211ENST00000492545 TRIM51Q9BSJ1 452 aa22.58■■□□□ 1.21
CTDSP1-211ENST00000492545 NUDT9Q9BW91 350 aa22.58■■□□□ 1.21
CTDSP1-211ENST00000492545 TMEM184CQ9NVA4 438 aa22.58■■□□□ 1.21
CTDSP1-211ENST00000492545 ZNF282Q9UDV7 671 aaPredicted RBP22.58■■□□□ 1.21
CTDSP1-211ENST00000492545 CDC23Q9UJX2 597 aa22.58■■□□□ 1.21
CTDSP1-211ENST00000492545 PDE10AQ9Y233 779 aa22.58■■□□□ 1.21
CTDSP1-211ENST00000492545 RP1L1Q8IWN7 2480 aaPredicted RBP22.57■■□□□ 1.2
CTDSP1-211ENST00000492545 NRP2O60462 931 aa22.57■■□□□ 1.2
CTDSP1-211ENST00000492545 ATXN8OSP0DMR3 200 aa22.57■■□□□ 1.2
CTDSP1-211ENST00000492545 AIMP2Q13155 320 aaKnown RBP22.57■■□□□ 1.2
CTDSP1-211ENST00000492545 PDAP1Q13442 181 aaKnown RBP22.57■■□□□ 1.2
CTDSP1-211ENST00000492545 HP1BP3Q5SSJ5 553 aaPredicted RBP22.57■■□□□ 1.2
CTDSP1-211ENST00000492545 RBM20Q5T481 1227 aaKnown RBP22.57■■□□□ 1.2
CTDSP1-211ENST00000492545 FAM45BPQ6NSW5 357 aa22.57■■□□□ 1.2
CTDSP1-211ENST00000492545 MAATS1Q7Z4T9 603 aa22.57■■□□□ 1.2
CTDSP1-211ENST00000492545 FAM45AQ8TCE6 357 aa22.57■■□□□ 1.2
CTDSP1-211ENST00000492545 ZDHHC19Q8WVZ1 309 aaPredicted RBP22.57■■□□□ 1.2
CTDSP1-211ENST00000492545 LINGO1Q96FE5 620 aa22.57■■□□□ 1.2
CTDSP1-211ENST00000492545 PWWP2AQ96N64 755 aa22.57■■□□□ 1.2
CTDSP1-211ENST00000492545 KRT12Q99456 494 aa22.57■■□□□ 1.2
CTDSP1-211ENST00000492545 STOX2Q9P2F5 926 aaPredicted RBP22.57■■□□□ 1.2
CTDSP1-211ENST00000492545 PABPN1LA6NDY0 278 aaKnown RBP22.56■■□□□ 1.2
CTDSP1-211ENST00000492545 TTLL8A6PVC2 850 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms