RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 SCINQ9Y6U3 715 aa8.68□□□□□ -1.02
SSBP1-212ENST00000489378 IGHV3-20A0A0C4DH32 117 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 LOC285095A0A1B0GVY8 99 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 H7C1Q1 480 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 RASGRF2O14827 1237 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 STX7O15400 261 aaKnown RBP8.67□□□□□ -1.02
SSBP1-212ENST00000489378 CTSVO60911 334 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 NEURL1O76050 574 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 SRP72O76094 671 aaKnown RBP8.67□□□□□ -1.02
SSBP1-212ENST00000489378 SEC24DO94855 1032 aaPredicted RBP8.67□□□□□ -1.02
SSBP1-212ENST00000489378 HEXBP07686 556 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 SP1P08047 785 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 ICAM2P13598 275 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 ATP1B2P14415 290 aaPredicted RBP8.67□□□□□ -1.02
SSBP1-212ENST00000489378 GJC1P36383 396 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 KIR2DL3P43628 341 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 WNT3AP56704 352 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 AP2B1P63010 937 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 PPP2R2BQ00005 443 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 ANK2Q01484 3957 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 AP1B1Q10567 949 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 KEAP1Q14145 624 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 PIGHQ14442 188 aaPredicted RBP8.67□□□□□ -1.02
SSBP1-212ENST00000489378 ZC3H12BQ5HYM0 836 aaKnown RBP8.67□□□□□ -1.02
SSBP1-212ENST00000489378 EMC4Q5J8M3 183 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 FRMPD2BQ6IN97 320 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 PPP1R2P3Q6NXS1 205 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 H3F3CQ6NXT2 135 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 PRMT9Q6P2P2 845 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 FIGLAQ6QHK4 219 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 SLCO4C1Q6ZQN7 724 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 MICALCLQ6ZW33 695 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 CRLF3Q8IUI8 442 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 LINC01555Q8NAE3 123 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 ZNF354BQ96LW1 612 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 C10orf90Q96M02 699 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 ZNF670Q9BS34 389 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 TUBB6Q9BUF5 446 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 YIPF2Q9BWQ6 316 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 THAP2Q9H0W7 228 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 FAM96AQ9H5X1 160 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 DMRT3Q9NQL9 472 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 TRPC4Q9UBN4 977 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 ARL5AQ9Y689 179 aa8.67□□□□□ -1.02
SSBP1-212ENST00000489378 LOC105369274A0A096LPK9 316 aa8.66□□□□□ -1.02
SSBP1-212ENST00000489378 LOC102723532A0A0G2JNH3 316 aa8.66□□□□□ -1.02
SSBP1-212ENST00000489378 A6NNC1 897 aa8.66□□□□□ -1.02
SSBP1-212ENST00000489378 NRP2O60462 931 aa8.66□□□□□ -1.02
SSBP1-212ENST00000489378 RALBP11234 206 aa8.66□□□□□ -1.02
SSBP1-212ENST00000489378 FERP16591 822 aa8.66□□□□□ -1.02
SSBP1-212ENST00000489378 ACADLP28330 430 aa8.66□□□□□ -1.02
SSBP1-212ENST00000489378 SSR1P43307 286 aaKnown RBP8.66□□□□□ -1.02
SSBP1-212ENST00000489378 NR0B1P51843 470 aaKnown RBP8.66□□□□□ -1.02
SSBP1-212ENST00000489378 NKX6-1P78426 367 aaPredicted RBP8.66□□□□□ -1.02
SSBP1-212ENST00000489378 XIAPP98170 497 aa8.66□□□□□ -1.02
SSBP1-212ENST00000489378 OC90Q02509 493 aaPredicted RBP8.66□□□□□ -1.02
SSBP1-212ENST00000489378 RPA4Q13156 261 aa8.66□□□□□ -1.02
SSBP1-212ENST00000489378 TAZQ16635 292 aa8.66□□□□□ -1.02
SSBP1-212ENST00000489378 MAPKAPK3Q16644 382 aa8.66□□□□□ -1.02
SSBP1-212ENST00000489378 FKBP15Q5T1M5 1219 aa8.66□□□□□ -1.02
SSBP1-212ENST00000489378 XP32Q5T750 250 aa8.66□□□□□ -1.02
SSBP1-212ENST00000489378 SLC25A25Q6KCM7 469 aa8.66□□□□□ -1.02
SSBP1-212ENST00000489378 TMEM205Q6UW68 189 aa8.66□□□□□ -1.02
SSBP1-212ENST00000489378 TAX1BP1Q86VP1 789 aa8.66□□□□□ -1.02
SSBP1-212ENST00000489378 LIX1LQ8IVB5 337 aa8.66□□□□□ -1.02
SSBP1-212ENST00000489378 TBC1D21Q8IYX1 336 aa8.66□□□□□ -1.02
SSBP1-212ENST00000489378 OR4N4Q8N0Y3 316 aa8.66□□□□□ -1.02
SSBP1-212ENST00000489378 NIPA2Q8N8Q9 360 aa8.66□□□□□ -1.02
SSBP1-212ENST00000489378 FAM98AQ8NCA5 519 aaKnown RBP8.66□□□□□ -1.02
SSBP1-212ENST00000489378 MYRIPQ8NFW9 859 aa8.66□□□□□ -1.02
SSBP1-212ENST00000489378 FAF2Q96CS3 445 aa8.66□□□□□ -1.02
SSBP1-212ENST00000489378 ZNF830Q96NB3 372 aaPredicted RBP8.66□□□□□ -1.02
SSBP1-212ENST00000489378 TP63Q9H3D4 680 aaPredicted RBP8.66□□□□□ -1.02
SSBP1-212ENST00000489378 MRPL47Q9HD33 250 aaKnown RBP8.66□□□□□ -1.02
SSBP1-212ENST00000489378 NEUROD4Q9HD90 331 aa8.66□□□□□ -1.02
SSBP1-212ENST00000489378 HACD3Q9P035 362 aa8.66□□□□□ -1.02
SSBP1-212ENST00000489378 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.66□□□□□ -1.02
SSBP1-212ENST00000489378 ZC3H7BQ9UGR2 993 aaKnown RBP8.66□□□□□ -1.02
SSBP1-212ENST00000489378 CRLS1Q9UJA2 301 aa8.66□□□□□ -1.02
SSBP1-212ENST00000489378 CHD3Q12873 2000 aaKnown RBP8.66□□□□□ -1.02
SSBP1-212ENST00000489378 CUBNO60494 3623 aa8.65□□□□□ -1.02
SSBP1-212ENST00000489378 A0A0A6YYK5 440 aaPredicted RBP8.65□□□□□ -1.02
SSBP1-212ENST00000489378 USP27XA6NNY8 438 aa8.65□□□□□ -1.02
SSBP1-212ENST00000489378 GABRR3A8MPY1 467 aa8.65□□□□□ -1.02
SSBP1-212ENST00000489378 AGAP14A8MT82 685 aa8.65□□□□□ -1.02
SSBP1-212ENST00000489378 DDX3XO00571 662 aaKnown RBP eCLIP8.65□□□□□ -1.027e-9■□□□□ 11
SSBP1-212ENST00000489378 SMAD7O15105 426 aaKnown RBP8.65□□□□□ -1.02
SSBP1-212ENST00000489378 CDC40O60508 579 aaKnown RBP eCLIP8.65□□□□□ -1.02
SSBP1-212ENST00000489378 BMP4P12644 408 aa8.65□□□□□ -1.02
SSBP1-212ENST00000489378 PKLRP30613 574 aa8.65□□□□□ -1.02
SSBP1-212ENST00000489378 CD68P34810 354 aaPredicted RBP8.65□□□□□ -1.02
SSBP1-212ENST00000489378 RFC3P40938 356 aa8.65□□□□□ -1.02
SSBP1-212ENST00000489378 MEP1AQ16819 746 aa8.65□□□□□ -1.02
SSBP1-212ENST00000489378 BTBD16Q32M84 506 aa8.65□□□□□ -1.02
SSBP1-212ENST00000489378 ZNF468Q5VIY5 522 aaPredicted RBP8.65□□□□□ -1.02
SSBP1-212ENST00000489378 SHEQ5VZ18 495 aa8.65□□□□□ -1.02
SSBP1-212ENST00000489378 ZNF449Q6P9G9 518 aa8.65□□□□□ -1.02
SSBP1-212ENST00000489378 ZC3H7AQ8IWR0 971 aaKnown RBP8.65□□□□□ -1.02
SSBP1-212ENST00000489378 CLDN19Q8N6F1 224 aa8.65□□□□□ -1.02
SSBP1-212ENST00000489378 PLD5Q8N7P1 536 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms