RNA–Protein interactions for RNA: ENST00000487476.5

NF1-211, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-211ENST00000487476 UTP4Q969X6 686 aaKnown RBP16.28■□□□□ 0.2
NF1-211ENST00000487476 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.28■□□□□ 0.2
NF1-211ENST00000487476 KCNK4Q9NYG8 393 aa16.28■□□□□ 0.2
NF1-211ENST00000487476 KLHL20Q9Y2M5 609 aa16.28■□□□□ 0.2
NF1-211ENST00000487476 RIF1Q5UIP0 2472 aaKnown RBP16.27■□□□□ 0.2
NF1-211ENST00000487476 ASXL3Q9C0F0 2248 aa16.27■□□□□ 0.2
NF1-211ENST00000487476 PIPSLA2A3N6 862 aa16.27■□□□□ 0.2
NF1-211ENST00000487476 ZNF839A8K0R7 811 aa16.27■□□□□ 0.2
NF1-211ENST00000487476 E7EQ34 232 aa16.27■□□□□ 0.2
NF1-211ENST00000487476 KLF11O14901 512 aa16.27■□□□□ 0.2
NF1-211ENST00000487476 AMD1P17707 334 aa16.27■□□□□ 0.2
NF1-211ENST00000487476 CDC16Q13042 620 aa16.27■□□□□ 0.2
NF1-211ENST00000487476 AMZ1Q400G9 498 aa16.27■□□□□ 0.2
NF1-211ENST00000487476 CATSPEREQ5SY80 951 aa16.27■□□□□ 0.2
NF1-211ENST00000487476 RGS9BPQ6ZS82 235 aa16.27■□□□□ 0.2
NF1-211ENST00000487476 SYVN1Q86TM6 617 aa16.27■□□□□ 0.2
NF1-211ENST00000487476 TRIM42Q8IWZ5 723 aa16.27■□□□□ 0.2
NF1-211ENST00000487476 RAB3IL1Q8TBN0 382 aa16.27■□□□□ 0.2
NF1-211ENST00000487476 MIEF2Q96C03 454 aa16.27■□□□□ 0.2
NF1-211ENST00000487476 OR2A14Q96R47 310 aa16.27■□□□□ 0.2
NF1-211ENST00000487476 TWSG1Q9GZX9 223 aa16.27■□□□□ 0.2
NF1-211ENST00000487476 CUEDC1Q9NWM3 386 aaPredicted RBP16.27■□□□□ 0.2
NF1-211ENST00000487476 ASCC3Q8N3C0 2202 aaKnown RBP16.27■□□□□ 0.2
NF1-211ENST00000487476 OR5K3A6NET4 321 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 NRP2O60462 931 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 H2AFYO75367 372 aaKnown RBP16.26■□□□□ 0.19
NF1-211ENST00000487476 HSPA4LO95757 839 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 PROS1P07225 676 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 CKMT1AP12532 417 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 MPSTP25325 297 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 PPM1FP49593 454 aaPredicted RBP16.26■□□□□ 0.19
NF1-211ENST00000487476 OCRLQ01968 901 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 LCP2Q13094 533 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 SF1Q15637 639 aaKnown RBP16.26■□□□□ 0.19
NF1-211ENST00000487476 METTL2BQ6P1Q9 378 aaKnown RBP16.26■□□□□ 0.19
NF1-211ENST00000487476 RAB3IPQ96QF0 476 aaPredicted RBP16.26■□□□□ 0.19
NF1-211ENST00000487476 LRMDAQ9H2I8 198 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 MID1IP1Q9NPA3 183 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 THAP1Q9NVV9 213 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 ACTR10Q9NZ32 417 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 USH1CQ9Y6N9 552 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 IGHV1OR21-1A0A087WYE8 117 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 IGKV1-8A0A0C4DH67 115 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 EME2A4GXA9 379 aaPredicted RBP16.26■□□□□ 0.19
NF1-211ENST00000487476 TMEM114B3SHH9 223 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 TMEM233B4DJY2 109 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 FLRT2O43155 660 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 EDF1O60869 148 aaKnown RBP16.26■□□□□ 0.19
NF1-211ENST00000487476 DIAPH2O60879 1101 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 CDH1P12830 882 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 UGT2B7P16662 529 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 VARSP26640 1264 aaKnown RBP16.26■□□□□ 0.19
NF1-211ENST00000487476 LSSP48449 732 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 CCNG1P51959 295 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 ERVPABLB-1P60509 514 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 CFHR1Q03591 330 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 TRAF3Q13114 568 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 SLC14A1Q13336 389 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 LETMD1Q6P1Q0 360 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 EFL1Q7Z2Z2 1120 aaKnown RBP16.26■□□□□ 0.19
NF1-211ENST00000487476 KIRREL3Q8IZU9 778 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 ZNF781Q8N8C0 355 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 ATP6V1E2Q96A05 226 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 CNDP2Q96KP4 475 aaKnown RBP16.26■□□□□ 0.19
NF1-211ENST00000487476 ZNF570Q96NI8 536 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 KCNA7Q96RP8 456 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 ZDHHC2Q9UIJ5 367 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 RNF11Q9Y3C5 154 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 PCDHB11Q9Y5F2 797 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 KCNE2Q9Y6J6 123 aa16.26■□□□□ 0.19
NF1-211ENST00000487476 WFS1O76024 890 aa16.25■□□□□ 0.19
NF1-211ENST00000487476 ARL1P40616 181 aaPredicted RBP16.25■□□□□ 0.19
NF1-211ENST00000487476 FOXA1P55317 472 aa16.25■□□□□ 0.19
NF1-211ENST00000487476 DAB2P98082 770 aa16.25■□□□□ 0.19
NF1-211ENST00000487476 MEF2AQ02078 507 aaPredicted RBP16.25■□□□□ 0.19
NF1-211ENST00000487476 NR1D2Q14995 579 aa16.25■□□□□ 0.19
NF1-211ENST00000487476 NAA25Q14CX7 972 aa16.25■□□□□ 0.19
NF1-211ENST00000487476 KIAA1614Q5VZ46 1190 aa16.25■□□□□ 0.19
NF1-211ENST00000487476 LCTLQ6UWM7 567 aa16.25■□□□□ 0.19
NF1-211ENST00000487476 USP53Q70EK8 1073 aa16.25■□□□□ 0.19
NF1-211ENST00000487476 SPRED1Q7Z699 444 aa16.25■□□□□ 0.19
NF1-211ENST00000487476 CUZD1Q86UP6 607 aa16.25■□□□□ 0.19
NF1-211ENST00000487476 NAXDQ8IW45 347 aa16.25■□□□□ 0.19
NF1-211ENST00000487476 OR4F6Q8NGB9 312 aa16.25■□□□□ 0.19
NF1-211ENST00000487476 NCSTNQ92542 709 aa16.25■□□□□ 0.19
NF1-211ENST00000487476 KLHL25Q9H0H3 589 aa16.25■□□□□ 0.19
NF1-211ENST00000487476 PNPOQ9NVS9 261 aa16.25■□□□□ 0.19
NF1-211ENST00000487476 FAM221BA6H8Z2 402 aa16.25■□□□□ 0.19
NF1-211ENST00000487476 PRAMEF10O60809 474 aa16.25■□□□□ 0.19
NF1-211ENST00000487476 OR4F21O95013 312 aa16.25■□□□□ 0.19
NF1-211ENST00000487476 LDOC1O95751 146 aaPredicted RBP16.25■□□□□ 0.19
NF1-211ENST00000487476 CD22P20273 847 aa16.25■□□□□ 0.19
NF1-211ENST00000487476 CD1CP29017 333 aa16.25■□□□□ 0.19
NF1-211ENST00000487476 GPR3P46089 330 aa16.25■□□□□ 0.19
NF1-211ENST00000487476 CAPZBP47756 277 aa16.25■□□□□ 0.19
NF1-211ENST00000487476 PRDX1Q06830 199 aaKnown RBP16.25■□□□□ 0.19
NF1-211ENST00000487476 CHIT1Q13231 466 aa16.25■□□□□ 0.19
NF1-211ENST00000487476 KIR2DS3Q14952 304 aa16.25■□□□□ 0.19
NF1-211ENST00000487476 CLEC6AQ6EIG7 209 aa16.25■□□□□ 0.19
NF1-211ENST00000487476 SLCO4C1Q6ZQN7 724 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms