RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 C2orf92A0A1B0GVN3 265 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 A0A1W2PRB8 838 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 C5orf60A6NFR6 353 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 H0YIG0 161 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 ARPC2O15144 300 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 TFAP2AP05549 437 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 STAG3L1P0CL83 205 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 AREGP15514 252 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 SFNP31947 248 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 KLC1Q07866 573 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 IL10RBQ08334 325 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 ZNF415Q09FC8 603 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 GTF2H2Q13888 395 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 INAQ16352 499 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 ODF4Q2M2E3 257 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 OR7E24Q6IFN5 339 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 ZNF770Q6IQ21 691 aaPredicted RBP4.21□□□□□ -1.74
VPS13A-211ENST00000484581 GALNT17Q6IS24 598 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 GTF2H2CQ6P1K8 395 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 GFRALQ6UXV0 394 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 UNC5DQ6UXZ4 953 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 RBM43Q6ZSC3 357 aaKnown RBP4.21□□□□□ -1.74
VPS13A-211ENST00000484581 ARMC9Q7Z3E5 817 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 GPR141Q7Z602 305 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 PIM3Q86V86 326 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 LONP2Q86WA8 852 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 TMEM219Q86XT9 240 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 ODF3L1Q8IXM7 274 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 ELMOD2Q8IZ81 293 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 CDCA5Q96FF9 252 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 DTD2Q96FN9 168 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 BICD1Q96G01 975 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 PGM2Q96G03 612 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 SCMH1Q96GD3 660 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 FAM20AQ96MK3 541 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 ZNF560Q96MR9 790 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 GDAP1L1Q96MZ0 367 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 SPATA13Q96N96 652 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 FAM213AQ9BRX8 229 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 SF3B5Q9BWJ5 86 aaKnown RBP4.21□□□□□ -1.74
VPS13A-211ENST00000484581 TEX13AQ9BXU3 409 aaPredicted RBP4.21□□□□□ -1.74
VPS13A-211ENST00000484581 ACPTQ9BZG2 426 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 NYXQ9GZU5 481 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 ACTL8Q9H568 366 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 MAGEF1Q9HAY2 307 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 TRPC7Q9HCX4 862 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 OLFML3Q9NRN5 406 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 POT1Q9NUX5 634 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.21□□□□□ -1.74
VPS13A-211ENST00000484581 AURKCQ9UQB9 309 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 KLK4Q9Y5K2 254 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 TTC3P53804 2025 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 EVPLQ92817 2033 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 PFASO15067 1338 aa4.21□□□□□ -1.74
VPS13A-211ENST00000484581 A0A087X0K7 114 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 PRSS46E5RG02 174 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 CXCL14O95715 111 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 GLUD1P00367 558 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 SERPING1P05155 500 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 HEXBP07686 556 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 PSG1P11464 419 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 ETS1P14921 441 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 ITGA2P17301 1181 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 SCP2P22307 547 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 JAK1P23458 1154 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 ELAVL4P26378 380 aaKnown RBP4.2□□□□□ -1.74
VPS13A-211ENST00000484581 CCKARP32238 428 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 ASMTP46597 345 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 KCNJ4P48050 445 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 ARCN1P48444 511 aaKnown RBP4.2□□□□□ -1.74
VPS13A-211ENST00000484581 GLUD2P49448 558 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 PEX5P50542 639 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 VAMP7P51809 220 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 TKTL1P51854 596 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 THOP1P52888 689 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 GMFBP60983 142 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 CACNG1Q06432 222 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 SLC20A2Q08357 652 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 TRAF3Q13114 568 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 PDE7AQ13946 482 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 HLFQ16534 295 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 ACKR1Q16570 336 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 PHKG1Q16816 387 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 DUOXA1Q1HG43 343 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 ASPRV1Q53RT3 343 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 SPDYCQ5MJ68 293 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 CYP4A22Q5TCH4 519 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 LYSMD4Q5XG99 296 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 IL17RELQ6ZVW7 336 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 KMT5CQ86Y97 462 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 ADHFE1Q8IWW8 467 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 DCP1BQ8IZD4 617 aaKnown RBP4.2□□□□□ -1.74
VPS13A-211ENST00000484581 CLIP4Q8N3C7 705 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 ZNF114Q8NC26 417 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 NOA1Q8NC60 698 aaKnown RBP4.2□□□□□ -1.74
VPS13A-211ENST00000484581 OR10Q1Q8NGQ4 319 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 DDX50Q9BQ39 737 aaKnown RBP4.2□□□□□ -1.74
VPS13A-211ENST00000484581 IDI2Q9BXS1 227 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 KRTAP2-2Q9BYT5 123 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 CARD9Q9H257 536 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms