RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 BMXP51813 675 aa3.48□□□□□ -1.85
GTF3A-207ENST00000482655 GAGE5Q13069 117 aa3.48□□□□□ -1.85
GTF3A-207ENST00000482655 GAGE6Q13070 117 aa3.48□□□□□ -1.85
GTF3A-207ENST00000482655 SLC39A6Q13433 755 aa3.48□□□□□ -1.85
GTF3A-207ENST00000482655 OR7E24Q6IFN5 339 aa3.48□□□□□ -1.85
GTF3A-207ENST00000482655 DCLRE1AQ6PJP8 1040 aa3.48□□□□□ -1.85
GTF3A-207ENST00000482655 FIGLAQ6QHK4 219 aa3.48□□□□□ -1.85
GTF3A-207ENST00000482655 RAD9BQ6WBX8 426 aa3.48□□□□□ -1.85
GTF3A-207ENST00000482655 PPP1R21Q6ZMI0 780 aa3.48□□□□□ -1.85
GTF3A-207ENST00000482655 PLEKHM3Q6ZWE6 761 aa3.48□□□□□ -1.85
GTF3A-207ENST00000482655 IQCA1Q86XH1 822 aa3.48□□□□□ -1.85
GTF3A-207ENST00000482655 SLC4A11Q8NBS3 891 aa3.48□□□□□ -1.85
GTF3A-207ENST00000482655 PPFIBP2Q8ND30 876 aa3.48□□□□□ -1.85
GTF3A-207ENST00000482655 ACVR1CQ8NER5 493 aa3.48□□□□□ -1.85
GTF3A-207ENST00000482655 RDM1Q8NG50 284 aa3.48□□□□□ -1.85
GTF3A-207ENST00000482655 SLC38A5Q8WUX1 472 aa3.48□□□□□ -1.85
GTF3A-207ENST00000482655 ROBO4Q8WZ75 1007 aa3.48□□□□□ -1.85
GTF3A-207ENST00000482655 ZNF354BQ96LW1 612 aa3.48□□□□□ -1.85
GTF3A-207ENST00000482655 SFXN2Q96NB2 322 aa3.48□□□□□ -1.85
GTF3A-207ENST00000482655 ZNF558Q96NG5 402 aa3.48□□□□□ -1.85
GTF3A-207ENST00000482655 OR6C1Q96RD1 312 aa3.48□□□□□ -1.85
GTF3A-207ENST00000482655 MGME1Q9BQP7 344 aa3.48□□□□□ -1.85
GTF3A-207ENST00000482655 DDX43Q9NXZ2 648 aaKnown RBP3.48□□□□□ -1.85
GTF3A-207ENST00000482655 ABT1Q9ULW3 272 aaKnown RBP3.48□□□□□ -1.85
GTF3A-207ENST00000482655 POMT1Q9Y6A1 747 aa3.48□□□□□ -1.85
GTF3A-207ENST00000482655 COL4A1P02462 1669 aa3.48□□□□□ -1.85
GTF3A-207ENST00000482655 ROCK2O75116 1388 aaKnown RBP3.48□□□□□ -1.85
GTF3A-207ENST00000482655 SZT2Q5T011 3432 aa3.48□□□□□ -1.85
GTF3A-207ENST00000482655 FLT1P17948 1338 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 ANKUB1A6NFN9 424 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 PMS2P5A8MQ11 134 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 MEIS2O14770 477 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 CELF2O95319 508 aaKnown RBP3.47□□□□□ -1.85
GTF3A-207ENST00000482655 BMP10O95393 424 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 FGF5P12034 268 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 MAP2K2P36507 400 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 VEGFCP49767 419 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 COG7P83436 770 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 PMP22Q01453 160 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 RBPJQ06330 500 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 CCDC184Q52MB2 194 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 ASPRV1Q53RT3 343 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 ODF2Q5BJF6 829 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 GCNT6Q5T4J0 391 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 FAM109BQ6ICB4 259 aaPredicted RBP3.47□□□□□ -1.85
GTF3A-207ENST00000482655 CAVIN1Q6NZI2 390 aaKnown RBP3.47□□□□□ -1.85
GTF3A-207ENST00000482655 FAM171BQ6P995 826 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 CEACAM20Q6UY09 585 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 ZBTB49Q6ZSB9 765 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 C11orf57Q6ZUT1 292 aaPredicted RBP3.47□□□□□ -1.85
GTF3A-207ENST00000482655 SPATA21Q7Z572 469 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 CCDC91Q7Z6B0 441 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 CCAR2Q8N163 923 aaKnown RBP3.47□□□□□ -1.85
GTF3A-207ENST00000482655 TMCO5AQ8N6Q1 288 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 OR10V1Q8NGI7 309 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 OR5R1Q8NH85 324 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 MOSPD2Q8NHP6 518 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 SLC44A1Q8WWI5 657 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 ZNF501Q96CX3 271 aaPredicted RBP3.47□□□□□ -1.85
GTF3A-207ENST00000482655 SPDL1Q96EA4 605 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 LINC00615Q96LM1 132 aaPredicted RBP3.47□□□□□ -1.85
GTF3A-207ENST00000482655 RMDN2Q96LZ7 410 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 CCDC114Q96M63 670 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 BARHL1Q9BZE3 327 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 SEMA6AQ9H2E6 1030 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 ZNF696Q9H7X3 374 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 POLKQ9UBT6 870 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 CPSF3Q9UKF6 684 aaKnown RBP3.47□□□□□ -1.85
GTF3A-207ENST00000482655 PADI3Q9ULW8 664 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 YIPF1Q9Y548 306 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 NME7Q9Y5B8 376 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 BRCA2P51587 3418 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 KIF24Q5T7B8 1368 aa3.47□□□□□ -1.85
GTF3A-207ENST00000482655 ASTN2O75129 1339 aaPredicted RBP3.46□□□□□ -1.85
GTF3A-207ENST00000482655 SIPA1L3O60292 1781 aaPredicted RBP3.46□□□□□ -1.86
GTF3A-207ENST00000482655 KDM3BQ7LBC6 1761 aa3.46□□□□□ -1.86
GTF3A-207ENST00000482655 RBBP6Q7Z6E9 1792 aaKnown RBP3.46□□□□□ -1.86
GTF3A-207ENST00000482655 IGLV5-45A0A087WSX0 123 aa3.46□□□□□ -1.86
GTF3A-207ENST00000482655 MED19A0JLT2 244 aaPredicted RBP3.46□□□□□ -1.86
GTF3A-207ENST00000482655 OR2M5A3KFT3 312 aa3.46□□□□□ -1.86
GTF3A-207ENST00000482655 ANXA2P2A6NMY6 339 aa3.46□□□□□ -1.86
GTF3A-207ENST00000482655 CCDC188H7C350 402 aa3.46□□□□□ -1.86
GTF3A-207ENST00000482655 TO15178 435 aa3.46□□□□□ -1.86
GTF3A-207ENST00000482655 XRCC3O43542 346 aa3.46□□□□□ -1.86
GTF3A-207ENST00000482655 STX6O43752 255 aa3.46□□□□□ -1.86
GTF3A-207ENST00000482655 SYNCRIPO60506 623 aaKnown RBP3.46□□□□□ -1.86
GTF3A-207ENST00000482655 CAVIN2O95810 425 aa3.46□□□□□ -1.86
GTF3A-207ENST00000482655 LDLRP01130 860 aa3.46□□□□□ -1.86
GTF3A-207ENST00000482655 INHBAP08476 426 aa3.46□□□□□ -1.86
GTF3A-207ENST00000482655 OR2T7P0C7T2 308 aa3.46□□□□□ -1.86
GTF3A-207ENST00000482655 FAM106CPP0CH98 169 aa3.46□□□□□ -1.86
GTF3A-207ENST00000482655 PAX1P15863 534 aa3.46□□□□□ -1.86
GTF3A-207ENST00000482655 HOXC13P31276 330 aa3.46□□□□□ -1.86
GTF3A-207ENST00000482655 MLLT10P55197 1068 aa3.46□□□□□ -1.86
GTF3A-207ENST00000482655 PPIGQ13427 754 aaKnown RBP eCLIP3.46□□□□□ -1.86
GTF3A-207ENST00000482655 ZNF273Q14593 569 aa3.46□□□□□ -1.86
GTF3A-207ENST00000482655 VWC2Q2TAL6 325 aa3.46□□□□□ -1.86
GTF3A-207ENST00000482655 RNASEH2BQ5TBB1 312 aaKnown RBP3.46□□□□□ -1.86
GTF3A-207ENST00000482655 SFMBT2Q5VUG0 894 aa3.46□□□□□ -1.86
GTF3A-207ENST00000482655 SLC35E4Q6ICL7 350 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms